KEGG   Electrophorus electricus (electric eel): 113569815
Entry
113569815         CDS       T05787                                 
Symbol
katnb1
Name
(RefSeq) katanin p80 WD40 repeat-containing subunit B1 isoform X1
  KO
K18643  katanin p80 WD40 repeat-containing subunit B1
Organism
eee  Electrophorus electricus (electric eel)
Brite
KEGG Orthology (KO) [BR:eee00001]
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   04812 Cytoskeleton proteins [BR:eee04812]
    113569815 (katnb1)
Cytoskeleton proteins [BR:eee04812]
 Eukaryotic cytoskeleton proteins
  Microtubules
   Tubulin-binding proteins
    Microtubule severing proteins
     113569815 (katnb1)
SSDB
Motif
Pfam: WD40 Katanin_con80 WD40_Prp19 WD40_CDC20-Fz WD40_WDHD1_1st Beta-prop_EML_2 Beta-prop_WDR90_POC16_2nd WDR55 Beta-prop_CAF1B_HIR1 Beta-prop_TEP1_2nd EIF3I Beta-prop_EML WD40_MABP1-WDR62_2nd ANAPC4_WD40 Beta-prop_DCAF4 WD40_MABP1-WDR62_1st Beta-prop_WDR75_1st NBCH_WD40 Beta-prop_TEP1_C Beta-prop_IFT140_1st WDR90_beta-prop_4th Beta-prop_SPT8 Beta-prop_IFT122_1st Beta-prop_SCAP Beta-prop_EIPR1 Beta-prop_HPS5 Beta-prop_RIG_2nd WD40_RFWD3 Beta-prop_WDR19_1st Beta-prop_Vps41 Beta-prop_RIG_1st eIF2A Beta-prop_DCAF12 PROPPIN Beta-prop_NUP159_NUP214 Beta-prop_NWD2_C Beta-prop_IP5PC_F Beta-prop_VPS8 Beta-prop_IFT122_2nd Beta-prop_LRRK2 RMC1_N WD40_like WDR54 Beta-prop_WDR35_TULP_N WD_LRWD1
Other DBs
NCBI-GeneID: 113569815
NCBI-ProteinID: XP_026853657
LinkDB
Position
Unknown
AA seq 689 aa
MAQSSATKVAWKLQDMVAHSSNVSSLVLGKSSSRLLATGGEDCRVNIWAVNKPNCIMSLT
GHNTPVECVQFSSSEEQVVAGSQSGSLRVWDLEAAKILRTLTGHKANICSLDFHPFGEYL
ASGSMDTNIKLWDVRRKGCVFRYKGHTQAVRFLAFSPDGKWLASASDDSTIKLWDLTAGK
MITEFTSHTSSVSIVQFHPNEYLLASGSADRTIKLWDLEKFEMIGSSVGETGVVRCVLFS
PDGSCLYSGSEDTLRVYGWEPDRCFDAVHVAWGKVADLAICNNQMIGVSYSQMNVSLHVV
DLSRVKKSGSMIQGLIQDDKPLAVPTPKGTTLRRNYERTNTSCNRQKMKQNPDADRRSPE
GERRSPSSEEERDEKESSAEITNPDDYREIFQPRNAISRTPPKTNEPFPAPLEDDTILLK
PSPAAEILTPMPDRLKAPTASSTPVLRVEPTVVVAVPRPPNSVVTASLAPPSGHVVPTSK
LKPNSAVIPSTRNEPVGLNAGDFLPPAQSGKTSVASDEEALVQIRKGHDTMCVMLTSRHK
NLDMVRIVWARNNIKATLDSAVSMNDLSIVVDVLNIINLKPSLWKLDTCSSILPQIEELL
QSKYESYVQTGCTSLRLILKRFWPLISDTLTAPPSVGVDITREERHQKCKACYKQLKNLS
NVVKLRAEQVGRHGSTFKELQLLMAPLDY
NT seq 2070 nt   +upstreamnt  +downstreamnt
atggctcagtccagtgccacaaaagttgcatggaaactccaggacatggttgcccactct
agtaatgtatcttcattggtgttgggtaaatcatcaagtcgcttgctggccactggagga
gaagactgcagagtcaacatctgggctgtcaacaaacctaactgcattatgagtttaaca
ggccacaacacccctgtggaatgtgtccagttcagtagctctgaggagcaggtggtggct
ggctctcagtcaggctctctgcgggtctgggacctggaagctgccaagatacttcgtaca
ttaacagggcacaaggcaaatatctgcagtctagacttccatccatttggggagtacctg
gcctcaggctccatggacactaacattaagctgtgggatgtgaggaggaaaggatgcgtg
ttcaggtataaggggcatactcaagcggtgcggtttttggcctttagtcctgatgggaag
tggcttgcttcagccagtgatgacagcacaattaagctgtgggatttaacagccgggaag
atgatcacagaatttacatcacacacctcatctgtcagcattgtccagtttcaccctaat
gagtaccttctggcttcagggagtgctgacaggaccataaagctgtgggatctggagaaa
tttgagatgattggctcctcagtaggagaaacaggagttgtaaggtgtgtgttgttcagt
cctgatggtagttgtttgtacagtggctcagaggacacactgcgagtgtatggctgggaa
cctgaccgctgctttgatgcagtgcatgtagcttggggcaaggtggctgaccttgcaatt
tgcaacaatcaaatgattggagtgtcttacagccagatgaatgtgagcctgcatgttgtg
gatctcagccgagtaaagaaatcaggatccatgatccaaggactaattcaggacgataag
ccacttgcagttcccactcctaaaggaacaacactacgccgtaactatgagcgaaccaat
acatcatgcaacagacagaaaatgaagcagaacccagatgcagacaggcgcagtcctgag
ggggagaggcgtagcccaagcagtgaggaggagcgtgatgagaaagagagcagtgcagaa
atcaccaatccagatgattacagagagatctttcagccccgcaatgccatctcacgcaca
cctcccaaaacgaatgaacccttccctgccccacttgaggatgacaccattttattaaag
cccagtccagctgcagagatccttactccaatgcctgacagactgaaggcacccactgcc
tcctccacgcctgttctgagagtggagcccacggttgtagttgccgtcccacgaccaccc
aattctgtggtaacagcgtcgctcgctcctccctcagggcatgttgtacctacatccaaa
ctcaaacccaattcagccgtcatcccctctacacgcaatgagcctgttggccttaatgca
ggggacttcttaccacctgcacaaagtggtaagaccagtgtcgcatctgatgaagaggca
ctggttcagatcagaaaagggcacgacacaatgtgtgtgatgctaaccagccgacacaaa
aatcttgacatggtgcggattgtctgggctagaaataatatcaaggcaacacttgactct
gctgtgtccatgaatgatttgtccattgtggtggacgtcctcaatataatcaaccttaaa
ccgtcactttggaaactggacacctgcagctcaatcttacctcagattgaggagctcttg
cagagtaaatatgagagctatgtgcagactggatgtacctctttaagactgattctgaag
cgtttttggccattgatttcagacaccttaaccgctcctccatctgttggagtggacatt
acacgggaggagaggcatcaaaaatgtaaggcatgctataagcagctgaagaacctcagt
aatgtcgtaaagctccgggctgagcaagttggtcgtcatggcagcactttcaaagaattg
cagctacttatggcaccactggactattaa

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