Electrophorus electricus (electric eel): 113570493
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Entry
113570493 CDS
T05787
Symbol
taf1b
Name
(RefSeq) TATA box-binding protein-associated factor RNA polymerase I subunit B isoform X1
KO
K15213
TATA box-binding protein-associated factor RNA polymerase I subunit B
Organism
eee
Electrophorus electricus (electric eel)
Brite
KEGG Orthology (KO) [BR:
eee00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
eee03021
]
113570493 (taf1b)
Transcription machinery [BR:
eee03021
]
Eukaryotic type
RNA polymerase I system
Basal transcription factors
SL1/TIF-1B
113570493 (taf1b)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Rrn7_cyclin_C
Rrn7_cyclin_N
Zn_ribbon_RRN7
DUF5816
ORC3_N
C1_1
Motif
Other DBs
NCBI-GeneID:
113570493
NCBI-ProteinID:
XP_026854715
LinkDB
All DBs
Position
Unknown
AA seq
588 aa
AA seq
DB search
MDEDLTEGYSEPCGQCGSVCWGLTDAEQFFCKNCHNVIERTKDVVDSSTYSANNRISHFP
SGTRKRNGREGGRKWIVCEGFQFILKHQAEALVGLGVCPEFKKKVLWNFWMRYLQKTRQA
YTKNPRITNGSPGDITSDSEPESLALNESSEASLPNRVSSALEDSGNTSDGKLSVCSGSL
DAAYYSFAKESKSRHLMTMPRTLALCHLALLWMREAITLADLLRLVSKRHVPYINVHEHF
PEEMKIFGKDCKVFIAESIPSYRMVHREASLLAKVMELPTFPPVSQDCLLHPALLCLRYT
MDANLPDELHLLVCKVMEKTAMGNDFFLTFDPAGPKQRLPCYDLQAAALIIVTMKLLFKL
DDQTEWMLSRKADKRREKHHMKKKTTTGSKMFSLRRWYMSVQPALESAREREEQAEARQA
WKSKKPVVPNLKNKTLVLKRRRVVEQLQSNFHTLTGSTMEQRPPAPSSFLFLWGTEEGAD
GPSLHHKRLAFLMEKKGRARCLVNRKYWHPALRLCHPRECREHFLELESSLPRMYVWLLG
LFSFLLGVSQAQLHGEVIQVERRLLRGKGMRQADADKPQRKRRKTPSV
NT seq
1767 nt
NT seq
+upstream
nt +downstream
nt
atggacgaagatcttacagaaggttacagtgaaccatgtgggcagtgcgggtctgtatgc
tggggcctaacagatgcggagcagtttttctgtaagaactgccacaacgtgattgagaga
acaaaagacgttgtggattctagcacatactctgcgaacaacaggatatctcattttcca
tcaggcactcgaaagagaaatggcagagaaggtggacgaaagtggatagtgtgtgaaggc
tttcagtttatcctaaaacatcaggcagaagctttggttggtctgggtgtctgccctgaa
tttaagaaaaaggtgttatggaatttctggatgcgatacctgcagaagaccagacaggct
tacacgaagaacccaaggatcacaaacggaagtccaggggatataacttctgacagtgag
cctgagtctttagctctgaatgaatcatctgaagcatcgctgcccaacagggtttcctca
gcgctggaagactctggaaacaccagcgatgggaagttgtcagtgtgttcaggctccctg
gacgccgcatactactcctttgcaaaggagagtaaaagccgccatcttatgaccatgcct
cgaacgctggccctgtgccacttggccctgctctggatgcgagaggccatcacactcgca
gacttgctcaggctggtgtccaaaaggcatgtcccttacattaacgtgcatgagcatttc
cctgaagagatgaagatctttggcaaggattgcaaggtctttatagctgagtccatcccc
tcctacaggatggtgcacagggaggcatcactgctggctaaggtcatggagctacccacc
ttccctcctgtttcccaggattgcctcctccacccagctctgctctgcctccgctacaca
atggatgccaaccttcctgatgagcttcatttgttggtatgtaaggtaatggagaagacg
gctatggggaacgacttctttctgacctttgaccctgctgggcctaagcagagactcccc
tgttacgaccttcaggcagcagcgctcatcattgtgaccatgaagcttctgttcaagctg
gatgatcagacagagtggatgctgtccaggaaggcagataaacgaagagaaaaacaccac
atgaagaaaaagaccacaacaggcagcaagatgttcagtttgagacgatggtatatgagt
gtccagcctgcgctggagagtgccagggagagagaggagcaggctgaggccaggcaggca
tggaaatccaagaagcctgtcgttccaaacttgaaaaacaagactttggtcctaaaaagg
agacgtgtagttgagcagctgcagagcaatttccataccctcactggttccactatggag
cagcggcctcccgcaccatccagcttccttttcctatggggaacagaagaaggtgcggac
ggacccagcctccaccataagcgcctggccttcctgatggagaaaaaaggaagagcccgg
tgccttgtcaaccgcaagtattggcacccagccttgaggctttgccacccacgagaatgc
agggaacatttcttggagctggagtctagcttgcccaggatgtatgtgtggctgctgggg
cttttctccttcctgctgggggtcagtcaggcacaactgcatggtgaggtcatccaggtg
gagaggcgtctgctgaggggcaaaggcatgcgtcaagcagatgcagataaacctcagcgc
aaacgaaggaagacgccctctgtgtga
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