KEGG   Electrophorus electricus (electric eel): 113570846
Entry
113570846         CDS       T05787                                 
Symbol
ddb1
Name
(RefSeq) DNA damage-binding protein 1
  KO
K10610  DNA damage-binding protein 1
Organism
eee  Electrophorus electricus (electric eel)
Pathway
eee03420  Nucleotide excision repair
eee04120  Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:eee00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   04120 Ubiquitin mediated proteolysis
    113570846 (ddb1)
  09124 Replication and repair
   03420 Nucleotide excision repair
    113570846 (ddb1)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04121 Ubiquitin system [BR:eee04121]
    113570846 (ddb1)
   03400 DNA repair and recombination proteins [BR:eee03400]
    113570846 (ddb1)
Ubiquitin system [BR:eee04121]
 Ubiquitin ligases (E3)
  Multi subunit type E3
   Cul4 complex
    Adoptor protein
     113570846 (ddb1)
DNA repair and recombination proteins [BR:eee03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    GGR (global genome repair) factors
     Cul4-DDB2 complex
      113570846 (ddb1)
    TCR (transcription coupled repair) factors
     Cul4-CSA complex
      113570846 (ddb1)
SSDB
Motif
Pfam: Beta-prop_RSE1_2nd CPSF_A Beta-prop_RSE1_1st Beta-prop_RIG_2nd
Other DBs
NCBI-GeneID: 113570846
NCBI-ProteinID: XP_026855317
LinkDB
Position
Unknown
AA seq 1140 aa
MSYNYVVTAQKPTAVNACITGHFTSAEDLNLLIAKNTRLEIYVVTAEGLRPVKEVGMYGK
IAVMELFRPKGESKDLLFILTAKYNACILEYKQNGDSIDIITRAHGNVQDRIGRPSETGI
IGIVDPECRMIGLRLYDGLFKVIPLDRDNRELKAFNIRLEELQVIDVHFLYGCQAPTVCF
IYQDPQGRHVKTYEVSLKEKEFNKGPWKQENVEAEASMVIPVPEPFGGAIIIGQESITYH
NGDKYLAIAPPTIKQSTIVCHNRVDPNGSRYLLGDMDGRLFMLLLEKEELMDGSMVLKDL
RVELLGETSIAECLTYLDNGVVFVGSRLGDSQLVKLNVDSNEQGSYVAVMETFTNLGPIV
DMCVVDLERQGQGQLVTCSGAFKEGSLRIIRNGIGIHEHASIDLPGIKGLWPLRSAAGRE
NDDMLVLSFVGQTRVLMLSGEEVEETELPGFVDNQQTFFCGNVAHQQLIQITSGSVRLVT
QDNKTLVSEWKEPQGRNISVAACNSTQVVLAVGRVLYYLQILGGELKQISSTEMEHEVAC
LDITPLGESGSESSLCAVGLWTDISARVLRLPCFSPLHKEMLGGEIIPRSILMTTFEGSH
YLLCALGDGALFYFGLDLQTGVLSERKKVTLGTQPTVLRTFRSLSTSNVFACSDRPTVIY
SSNHKLVFSNVNLKEVNYMCPLNSEGYPDSLALANNSTLTIGTIDEIQKLHIRTVPLYES
PKRICYQEVSECFGVLSSRVEMQDSSGTTAPVRPSASTQALSSSISSSKLFPSSTSPHET
SFGEEVEVHSLLVVDQNTFEVLHAHQFLPSEYALSLVSCKLGKDPTVYFIVGTAMVYPEE
AEPKQGRIIVFHYTDSKLQTVAEKEVKGAVYSMVEFNGKLLASINSTVRLYEWTAEKELR
TECNHYNNIMALYLKTKGDFILVGDLMRSVLLLMYKPMEGNFEEIARDFNPNWMSAVEIL
DDDNFLGAENAFNLFVCQKDSAATTDEERQHLQEVGVFHLGEFVNVFCHGSLVLQNLGES
STPTQGSVLFGTVNGMIGLVTSLSEGWYSLLMDLQNRLNKVIKSVGKIEHSFWRSFNTER
KTEQATGFIDGDLIESFLDLGRAKMQEVVSTLQIDDGSGMKREATVDEVIKIVEELTRIH
NT seq 3423 nt   +upstreamnt  +downstreamnt
atgtcatacaactacgttgtaacggcgcagaaacccacggcagtcaatgcttgcataact
gggcatttcacctctgcggaggacctgaatctgcttatagcaaagaacacacgactggag
atctatgtggtcactgcagagggactgcgacctgttaaagaggttggaatgtatggaaag
attgccgttatggagttattcaggcctaagggggagagtaaagacctactgttcattttg
actgctaaatataatgcctgcatcctggagtacaagcagaatggagatagcattgacatc
atcactcgtgcacatggcaatgtccaggaccggattgggcgtccatcagagactggcatt
attggcattgtggatcctgagtgtcgtatgattggtttgcggttgtatgatggtctcttt
aaagtcatcccattggatcgtgataaccgtgaacttaaggcctttaacattcgattagag
gagctgcaggttatagatgtgcacttcctttatggctgccaggcccccactgtctgtttt
atataccaggatcctcagggccggcatgtgaagacttatgaggtctctttgaaagagaag
gagttcaacaagggcccttggaagcaggagaatgtggaagcagaggcctctatggtcatt
ccagttcctgagccatttggtggcgctattattattggccaagagtccattacctatcac
aatggagacaaatacctggcaattgcccctccaacaatcaagcaaagcacaatcgtttgt
cacaaccgtgtggacccaaatggttctcgctatctactgggtgacatggatggaaggctc
ttcatgttgctgttggagaaagaggagttgatggatgggtccatggtgcttaaagacctg
cgagtggaactactgggagagacctccattgctgagtgtcttacatacttggataatgga
gtggtatttgtaggttctaggcttggagattctcaactggtgaagttgaacgtggacagt
aatgagcaggggtcatatgtagcagtcatggagacattcactaaccttggtcccatagtg
gatatgtgtgtagtagatctagagagacaagggcaaggccagctggtcacttgctctggg
gcatttaaggagggctctcttagaatcatccgtaatggcattggaatccatgagcacgcc
agtatcgacctgcctggcatcaaagggttatggcctcttcgttcagcggcaggcagagag
aacgatgacatgctggtgctttcatttgttggccagaccagggttctgatgctgagtgga
gaggaggtggaggagacagagcttccaggctttgtggataaccagcagacattcttttgc
ggaaacgtcgctcaccaacaactaattcagatcacttcgggttcagtgcgcctggtcact
caggacaacaagactctggtcagtgagtggaaggagcctcaggggaggaacattagcgtg
gctgcatgcaactccacccaggtggtactggctgtgggccgagtgctctactacttgcag
atcctcggtggggagctcaaacagatcagctctacagagatggagcatgaggtggcctgc
ctggacatcaccccactgggagagagtggcagcgagtccagcctgtgtgccgtgggcctg
tggactgacatctcggctcgagtactgcgtctaccctgcttcagtcccctgcataaggag
atgctaggaggagagatcattccacgatccatcctcatgaccacatttgaggggagtcac
tacttgctgtgtgctctgggagacggggcactcttctactttggcctggatctccaaaca
ggtgttctgagcgaacggaagaaggtgaccctgggcacccagcctaccgtgctgcgcaca
ttccgctccctctccacctccaacgtgtttgcctgctcagacagacccaccgtcatctac
tccagcaaccacaagctggtcttttccaatgtcaacctcaaggaggtcaactacatgtgc
ccgctcaactcggagggctaccccgacagcttggctctggccaataacagcactttgacc
attggcaccatcgatgagatacaaaaacttcacattcgcacggtgcctctttatgaatca
cccaagaggatctgctatcaggaggtgtcggagtgctttggagtcctgtctagcagagtg
gagatgcaggactccagcggcaccacggcccctgtgcgccctagcgccagcactcaggcc
ctgtcgagcagcattagctctagcaagctgttccccagcagcacctccccccacgagacc
tcctttggtgaggaggtggaggtgcacagcctgctggtggttgaccagaacacattcgaa
gtgctccatgcccaccagttcctgccgagtgagtacgctctgagcctcgtctcctgcaag
ctgggcaaagatcccacggtctactttattgtgggcactgccatggtctaccctgaggaa
gcggaacctaaacagggccgcattattgtcttccactacacagacagtaaactccagacg
gttgctgaaaaggaggtcaaaggggctgtgtactctatggtggaattcaatggtaaatta
ttggcgagcatcaacagcactgtgcgcctgtacgaatggaccgcagagaaagaactgagg
acagagtgcaaccattataacaacataatggctctgtatctcaagaccaaaggggacttc
atccttgtaggagacctaatgaggtctgtactgctcctgatgtacaaacccatggagggc
aactttgaagagattgctcgggacttcaatcctaactggatgagtgccgtggagattttg
gacgatgataacttccttggagcggagaatgcgtttaacctttttgtctgtcaaaaagac
agtgctgctaccactgatgaggagagacagcatttgcaggaggtgggagtatttcactta
ggcgagttcgtaaatgtcttctgtcacggttccctggtgctccagaaccttggtgagagt
tccacacctacccaaggctctgtgctctttggcacagtcaatgggatgattggattggtg
acatctctgtcagagggctggtacagcttactcatggacttgcagaataggctcaacaag
gtcattaagagcgtgggcaagatcgagcacagcttctggaggtcctttaatacggagcgc
aagactgagcaggctacgggcttcatcgacggagacctcatcgagagcttcttggacctg
ggccgtgcaaaaatgcaagaggtggtgagcacgctacagatagacgacggcagtgggatg
aagcgcgaggctacagtggatgaagtgattaagattgttgaggagctcaccaggatccac
taa

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