Electrophorus electricus (electric eel): 113572473
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Entry
113572473 CDS
T05787
Symbol
prpf4
Name
(RefSeq) U4/U6 small nuclear ribonucleoprotein Prp4
KO
K12662
U4/U6 small nuclear ribonucleoprotein PRP4
Organism
eee
Electrophorus electricus (electric eel)
Pathway
eee03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
eee00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
113572473 (prpf4)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
eee03041
]
113572473 (prpf4)
Spliceosome [BR:
eee03041
]
Complex B
U4/U6.U5 tri-snRNP components
U4/U6 snRNP specific factors
113572473 (prpf4)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
WD40_Prp19
WD40
WD40_CDC20-Fz
WD40_WDHD1_1st
Beta-prop_EML_2
Beta-prop_CAF1B_HIR1
EIF3I
WDR55
Beta-prop_WDR90_POC16_2nd
WD40_MABP1-WDR62_2nd
Beta-prop_TEP1_2nd
Beta-prop_WDR75_1st
ANAPC4_WD40
WD40_MABP1-WDR62_1st
WDR90_beta-prop_4th
Beta-prop_EML
PRP4
NBCH_WD40
Beta-prop_DCAF4
Beta-prop_TEP1_C
Beta-prop_EIPR1
Beta-prop_SCAP
Beta-prop_RIG_2nd
Beta-prop_IFT122_1st
Beta-prop_Vps41
Beta-prop_IFT140_1st
WD_LRWD1
WD40_like
Beta-prop_WDR35_TULP_N
Beta-prop_WDR11_1st
Motif
Other DBs
NCBI-GeneID:
113572473
NCBI-ProteinID:
XP_026857885
LinkDB
All DBs
Position
Unknown
AA seq
507 aa
AA seq
DB search
MSDEEEAPAVKKARIFYGSIEEKEKERLGREGATSSVKDAIKAGIEAGNINISSGESLEL
EDRVSERQAEVLAEFERRKRARQITVSTDDAEVKACLRALGEPISLFGEGPAERRERLRN
ILSVVGPDALKKSKKDEDKAKRSQDDSQQTWYHEGPDTLKEARLWLAKYSLPRAVMRLDA
ARAQKEVPESTRTIRQQELHKSLRNLNNFCSQIGDDRPISYCQFSPNSKLLVTASWSGLC
KLWNVPDCSLVRTLRGHNTNVGAISFHPQATLTLEETDVNMASCAADGSVKLWSLDSDEP
VADIEGHSMRVARVAWHPSGRFLGTTCYDNSWRLWDLEVQEEILHQEGHSKGVHDLHFHP
DGSLAGTGGLDSFGRIWDLRTGRCVMFLEGHLKEIYGINFSPNGYHVATGSGDNTCKVWD
LRKRTCIYTIPAHQNLLSSVKFQPTDGHFLLTGAYDNTAKVWTHPGWSPLKTLAGHEGKV
MGLDLSPDGQLIATCSYDRTFKLWVSE
NT seq
1524 nt
NT seq
+upstream
nt +downstream
nt
atgtcggatgaagaagaagcgccagcggtgaaaaaggctcggatcttctatggaagcatc
gaagaaaaggagaaagaacgtcttggtcgtgagggagccacctcctctgtgaaagatgct
attaaggctggaattgaggctggcaatattaacatttccagtggtgagtccctggagcta
gaggaccgtgtaagtgagcgtcaggctgaggtgctggccgaatttgagcgtagaaaaaga
gctcgacaaatcacagtctctactgatgatgctgaagtcaaagcctgcctgcgtgctctg
ggagagccaatctcactgttcggtgaaggccccgctgaaagacgagagagattgaggaat
atcttgtcagtagtagggcctgatgccttgaagaaatccaagaaagatgaagacaaagca
aagcgttcccaagatgattctcagcaaacatggtaccatgagggccctgacactctaaag
gaggcacgtctctggctagctaaatattcattgcccagagccgtgatgaggttagatgct
gcacgtgctcagaaagaggttccagaatcaacacgcaccataaggcagcaagagcttcac
aagtctctcaggaacttgaataacttctgcagtcagattggagatgatcgtccgatatcc
tactgccagttcagccctaactccaaactcctagtgactgcttcatggagtgggctgtgc
aaactctggaatgtcccagattgtagccttgtccgcacattaaggggtcacaatactaat
gttggagcaattagtttccatccacaagccactcttactcttgaggagacagatgtcaac
atggcctcttgtgctgcagatggatctgttaaactgtggagtttagatagtgatgagcct
gtcgcagacattgagggtcactccatgagggtggctcgggttgcatggcacccttctggt
cgctttctgggtacaacttgttatgacaactcatggcgactgtgggatcttgaggtccaa
gaggaaattcttcatcaggaaggccacagtaaaggtgtccatgatttgcattttcatcct
gatgggtccttagcaggaactggtggcctggactcttttggtcgcatatgggacctgagg
actggtcgctgtgtcatgttcttggagggccaccttaaagagatatatggaatcaatttc
tccccaaatggttatcatgtggccacggggagcggtgacaacacatgtaaagtgtgggac
ttgaggaagaggacatgcatatacacaatccctgctcatcagaatctgctgtcctcagtc
aagttccagcctacggatggtcatttcttgctcactggtgcgtatgacaatacagctaaa
gtgtggacccaccctggctggtctcctctcaagactctggcagggcatgagggcaaggtg
atgggactggatctgtcccctgatggacaactaattgccacctgttcctatgaccgcacc
ttcaaactctgggtgtctgagtga
DBGET
integrated database retrieval system
