Electrophorus electricus (electric eel): 113572720
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Entry
113572720 CDS
T05787
Symbol
prkn
Name
(RefSeq) LOW QUALITY PROTEIN: E3 ubiquitin-protein ligase parkin
KO
K04556
parkin [EC:
2.3.2.31
]
Organism
eee
Electrophorus electricus (electric eel)
Pathway
eee04120
Ubiquitin mediated proteolysis
eee04137
Mitophagy - animal
eee04141
Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:
eee00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
113572720 (prkn)
04120 Ubiquitin mediated proteolysis
113572720 (prkn)
09140 Cellular Processes
09141 Transport and catabolism
04137 Mitophagy - animal
113572720 (prkn)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
eee04131
]
113572720 (prkn)
04121 Ubiquitin system [BR:
eee04121
]
113572720 (prkn)
03029 Mitochondrial biogenesis [BR:
eee03029
]
113572720 (prkn)
Enzymes [BR:
eee01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.31 RBR-type E3 ubiquitin transferase
113572720 (prkn)
Membrane trafficking [BR:
eee04131
]
Autophagy
Mitophagy
PINK1-Parkin associated proteins
113572720 (prkn)
Aggrephagy
Other aggrephagy associated proteins
113572720 (prkn)
Xenophagy
Other xenophagy associated proteins
113572720 (prkn)
Ubiquitin system [BR:
eee04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
RBR proteins
113572720 (prkn)
Mitochondrial biogenesis [BR:
eee03029
]
Mitochondrial quality control factors
Mitophagy factors
Parkin-dependent mechanism factors
113572720 (prkn)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
zf-RING_14
zf-RING_12
IBR_2
IBR
ubiquitin
IBR_1
Rad60-SLD
ADAMTS_CR_3
Rad60-SLD_2
Dsc3_N
Motif
Other DBs
NCBI-GeneID:
113572720
NCBI-ProteinID:
XP_026858319
LinkDB
All DBs
Position
Unknown
AA seq
462 aa
AA seq
DB search
MLVYVRFNSSHGFPLEVEEGASVAELMEAVGRLRGAQPDQLRVIFAGRELHSDATLQACD
LPEQSTVHVVLAPPTATRRSQXXXELVLQRTLRGSMDSLTRLDLSASRLPATSIGLAAVL
EGDAPAAEDTPTRTELKPHSSFYVFCKTVCRAIQPGKLRVRCIACKQGTLTLSRGPSCWD
DVLLPGRIHGVCQAQGCDGRTAEFYLKCAAHPTCEEDTSVALDLIMPNVRRVPCIACTDV
LSPVLVSQCAQRHVICLDCFHLYCVTRLDERQFIHDPAVGYSLPCAAGCPDSLIKDVHHF
RVLGDEQYERYQRYAAEECLLKMGGVLCPAPGCGAGLLPEQDQRRIQCERRVGLGCGFVF
CRDCMEEYHEGECRRRTAMPAGGAPQQGYVLDEGAALRARWEQASLETIDETTRPCPKCR
VPVEKNGGCMHMVCPRAQCKFEWCWLCRMEWNRDCMGNHWFG
NT seq
1389 nt
NT seq
+upstream
nt +downstream
nt
atgctcgtgtatgtgcggtttaactcgagtcatggtttcccgctggaggtggaagagggg
gcaagtgtggcggaactcatggaggcagtggggcgtctgcggggagcgcagcccgatcag
ctccgggtgatcttcgctgggcgagagctccatagtgacgccactctacaggcctgcgat
ctgccggagcagagcacggtgcacgtggtactggctccacccaccgccacccgccgctcc
cagcnnnnnnnngagctcgtcctgcagcggacgctgcgtggcagcatggacagcctgacc
cggctggacctcagcgcctcccgcctgcccgcaacctccatcggcctggccgccgtcctg
gagggggacgccccggctgcagaggacacgcccacacgaacagaactcaagccccacagc
agtttctatgtgttctgtaaaacggtgtgcagggccattcaacctgggaagctacgcgtc
cgctgcatagcctgcaagcaaggaacgctgacgctcagccgggggccgtcgtgctgggat
gatgttctcctgccaggccggatccacggcgtgtgccaggcacagggctgcgacggtcgc
acagcggagttttatctgaagtgtgccgcccatcccacctgtgaggaggacacgtcggtg
gcgctggacctgatcatgcccaatgtgaggcgtgtgccctgcatcgcctgcactgacgtc
ctgagtcccgttctggtgtctcagtgtgcccagcgtcacgtaatctgtctggactgtttc
cacctgtactgtgtgaccagactggacgagaggcagttcatccatgacccagccgtgggc
tactctctgccctgtgccgctggatgccctgactctctcattaaagacgttcatcatttt
cgggtcctgggtgatgagcagtatgagcggtaccagcgctatgcagcggaggagtgcttg
ctgaagatgggaggtgtcctgtgccctgctccaggctgtggggctggtctgctccctgag
caggaccagcggaggatccagtgtgagcggagggtcggcctgggctgcgggtttgtgttc
tgccgggactgcatggaagagtaccacgagggcgagtgcaggcgaaggactgccatgcca
gcaggaggcgctccacagcagggctacgtgctggacgagggggccgccctgcgtgcccgc
tgggagcaggcatcactggagaccatagacgagaccacccgcccttgtcccaagtgcagg
gtccctgtggagaagaatggcggctgcatgcacatggtgtgtccccgggcccagtgtaag
tttgagtggtgctggctatgtcgcatggagtggaaccgggattgcatgggcaaccactgg
ttcggctga
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integrated database retrieval system
