Electrophorus electricus (electric eel): 113573598
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Entry
113573598 CDS
T05787
Symbol
edc4
Name
(RefSeq) enhancer of mRNA-decapping protein 4 isoform X1
KO
K12616
enhancer of mRNA-decapping protein 4
Organism
eee
Electrophorus electricus (electric eel)
Pathway
eee03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
eee00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
113573598 (edc4)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
eee03019
]
113573598 (edc4)
Messenger RNA biogenesis [BR:
eee03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
113573598 (edc4)
mRNA degradation factors
5'-3' decay
Decapping complex
113573598 (edc4)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Ge1_WD40
EDC4_C
WD40_WDHD1_1st
WD40
Beta-prop_HPS5
WD40_CDC20-Fz
Beta-prop_TEP1_2nd
WD40_Prp19
Beta-prop_EML_2
Beta-prop_EDC4L
WDR55
Motif
Other DBs
NCBI-GeneID:
113573598
NCBI-ProteinID:
XP_026859756
LinkDB
All DBs
Position
Unknown
AA seq
1384 aa
AA seq
DB search
MASSSNIDIEGATQHLRDILKLDRPNNSAEGAASESQRTSVNGELNGLLGADLIGAGVQS
PLVEPSDHNSDMSTPDTQTISLSGDDCSTCIAITANNVEIVASRDSSIDSKARGSNKVKI
QPVAKYDWEHKYYYGNLIAVSNAYLAYAIRGANNHAMIRVLRLGSSERTLLKGFTGAVTD
LAFAHLDSALLGCVDEAGNMFIWQLTSHNSKIQDEVIVHIRRPEDTPLNSNRRLIWCPFI
PEDSDDSPEDPCQTLALLHEDRAEVWDLDILRSSNSTWPVDATDLREGFITINGHTARIS
EGALSPDGTVLATASHDGYVKFWQIYIEGQDQPRCLHEWQPHNGRPLSCLLFCDNHKKQD
PDMPFWRFLITGADQNQELKMWCTVSWTCLQTIRFSPDPLNSHVLPSLKASLDLSAECLI
LTDVQRKVLYVMELFQDQEKGRARFTAVSEFLLTHPVLSFGVQDVSHARLRHTEVLPPDE
ESESMTTEGSQGPLESKSGIQIKLYCVHTKSLQDVQIWFQPNQDAAASLFMPASSASQDG
FGFADPLTDLSVEALNSDKESGGSDLQSDLCKMPVLPAPADFLSPAGAAMPKLMTPDAFL
TPSASVPASPGSSASSLTIVTAVSSSDSGARAVEDLTQSPKLVTDGASSSLTLSASTNSP
RSSSILIPGLGENLQGFSPPLVRSPSLLREASLLCEAAPYTHAPPLPYPLPPMQVLPSPN
PPLSLDLQAIEPMLLPQASPTRARSPDVISSASTAISQDMPEXLPLELGGAGASDAEQRL
GTTPSLLETALSQENAAVAATSCSDSSANHSWPAAPDITRETRNSLRDNGLGDCSREDLK
DRHLSPPYHRRTYHLTQNDSQDASAEQSDHDDEVASLASSSGNCGSRASHRLPVKDWKTS
PRGSPKLKRKSKKDDGDSSQSRQADHQLSSEVQEELLLLLRSQQRELSELRQSQQELLQR
VTGHMDAVQSSIMAHVEHVLLTQQEQEERRMERLLAEGHTRSQQLQDHLAQQLAHTLGTM
LSSRLDKVLREEMKKTVPQTISKCMEPVTGQMSSTIAAKLTAVEGTLKENVTKVVKSKNT
TDAMGRAAAEAMQGPIQAAYKDAFQSIVLPVFERGCQSMFQQINDSFKQGTHEYIQQLEA
HVKNRKQREQDARDPVIAQLQQMIDTLQTSQDQLATTVAASVRSEVQHQLHLIVGNLQDS
ILTQVQRIVKGEVSLAMKEQQAAVTSSIMQAMRSAAGTPVPTAHLDFQAQQASILQLLQQ
GHLNEAFQQALSAADLNLVLYVCETIDSQQVFGQHPCPLHQAVLLSLIQQLSTSLATRTD
LKISYLEDAVMSLDHGDPVTRDHMSAVLSQVRQKLFQFLQQDPHGPLSKRARRLMMMLQG
LVGQ
NT seq
4155 nt
NT seq
+upstream
nt +downstream
nt
atggcttccagttccaacatagatatagaaggcgcaacccagcatcttcgagacatcttg
aaattggatcgacccaataattccgccgagggcgctgcaagtgagagccagaggacctct
gttaatggagagttaaacggacttctgggggctgaccttattggtgcaggggttcaaagt
ccactggtggaaccctcagatcacaactcagatatgagcacaccagatactcaaacgatt
tctttatctggggatgattgctccacttgcattgccatcactgctaacaatgtggaaatt
gtcgccagtcgagactctagtatagatagtaaagctcgtgggagcaataaggttaaaata
cagccagtagcaaaatatgattgggagcacaagtattactacggaaacttaatagcagtg
tctaacgcatacttggcatatgccattagaggtgccaacaaccatgccatgatccgcgtg
ttgcggctgggctcgtcggagcgcacgctgctgaaaggcttcacgggggcagtcacggac
ctggcctttgcccacctcgactctgccctgctgggctgtgtcgacgaggccggcaacatg
ttcatctggcagctcaccagccacaacagcaaaatacaagacgaagtgatcgtgcacatc
cggaggcccgaggacacgccactgaactcaaaccgcaggctgatctggtgtccctttatc
cctgaggatagtgatgacagtccagaggacccgtgccagaccctggcccttctgcacgag
gaccgggctgaggtttgggaccttgacatcctgcgctccagtaacagtacgtggcctgtg
gacgccaccgatcttagagagggcttcatcaccattaacggacacacagcgcgaatcagt
gagggtgctctgtcccctgatggcaccgtcttggccactgccagtcatgatggctatgtc
aaattctggcagatttacattgaagggcaagaccaaccaagatgtctacacgagtggcag
ccccataacggacggcctctctcctgcctgctcttctgtgacaaccacaagaagcaagac
ccagacatgcccttctggaggtttctgatcacgggagcagaccagaaccaggagctgaaa
atgtggtgcacagtttcatggacctgcctccagaccatcaggtttagtccggacccgtta
aactcccatgtcctgcctagtctgaaggccagcctggacctgtctgcagagtgtctcatc
ctcacagacgtgcagagaaaggtgctgtatgtgatggagctcttccaggaccaggagaag
ggtcgtgccaggttcacagcggtctctgagttcctgctcacacaccctgtgctgagcttt
ggtgttcaggatgtcagtcatgcccgcctgcgccacactgaagtcctccccccagacgag
gagagcgagagtatgacgacagagggaagccaagggcccctggagtccaaatcaggaatt
caaattaagctttactgtgtgcacacaaagtccctccaggacgtccagatctggttccag
cccaaccaggatgctgctgcctctctcttcatgccggctagctccgcctcccaggacggg
tttggttttgcggacccgctgacggatctgagtgtggaggcactgaactcggataaggag
tcggggggcagcgacttgcaaagcgacctgtgcaagatgcccgttctcccggcacccgct
gacttcctgagccctgctggtgccgccatgcccaaacttatgactccggatgccttcctc
acccccagcgcttctgtgccagcgtctcctggtagcagtgccagcagcttgactatagtg
acagccgtgagcagttcagacagcggcgcaagggctgtggaggacctcacccagagcccc
aagctggtgacggacggagccagcagcagcctgaccctcagcgcaagcaccaacagcccg
aggtccagctccatcctcatcccaggcctgggagaaaacctccagggcttctctcctccg
cttgtgcgctctccctccctcctgcgcgaggcctctctgctgtgtgaggcagccccctac
actcacgcgcctcccctgccctacccactgccccctatgcaggtactgccctctccgaac
ccacccctctccctggacctgcaggccatcgagcccatgctgctgccccaggcgtcaccc
acccgggcccgctccccggacgtcatctcctctgcctccacagccatctcacaggacatg
cctgagnccctgccactggagctcggaggggcaggcgccagcgacgccgagcagaggctg
ggaaccacgccgtcgctactggagacggcgctgtcgcaggagaacgctgccgtggctgcc
acctcctgctccgacagcagcgcgaaccacagctggcccgctgcgcctgacatcacccgc
gagacacggaacagcctgcgcgataatggcctgggagactgctccagagaggatctgaag
gacaggcacctgtctcctccctaccacagacgcacgtatcacctgacccagaacgacagc
caagatgccagtgctgagcagagtgaccatgacgacgaggtggccagtctggcgtcgtca
tcagggaactgcggttctcgggcttctcacaggctcccggtgaaggactggaagacctcg
cctcgtggctcccccaaactcaaacgcaaaagcaagaaggatgatggtgattcctcacaa
tccagacaggcagatcaccagctgagttcagaagtgcaagaggagctgctgcttcttctc
aggagccagcagagggagctgtccgaactgcggcagagccaacaggagctcctgcagagg
gtcacgggccacatggatgctgtgcagagctccatcatggcccatgtcgagcatgtccta
ctcacacaacaggagcaggaagagaggcggatggagcgtctgttggcggaggggcacacg
cgcagccagcagctccaggaccacctggctcagcagctggcccacactctgggcaccatg
ctctccagccgtctggacaaggtgctgcgcgaggagatgaagaaaaccgttccgcagacc
atttcgaagtgtatggaacctgtgactgggcagatgagcagcacgattgcagccaagctg
accgcagtggagggaacgctaaaagagaacgtcaccaaagtggtcaagtctaagaacact
acggatgcgatgggacgcgcggcagctgaagccatgcagggccctatccaggcggcctac
aaagacgccttccagagcatcgtgctccctgtgtttgagcgcgggtgccagtccatgttc
cagcagatcaatgacagctttaagcagggaacccatgagtatatccagcagctggaggcg
catgtcaagaacaggaagcagcgtgagcaggatgcacgggatcctgtgattgctcagctg
cagcagatgattgacacgctgcagacatcacaagatcagctggccactactgtagcagcc
agcgtgcgctctgaggttcagcaccagctccacctgatcgtgggaaacctacaggactcc
atcctgacccaagtgcagcgcattgtgaagggcgaggtgagcctggccatgaaggagcag
caggcggccgtcacctccagcatcatgcaggccatgcgttcggcggcgggcacacccgtg
cccactgcccacctcgacttccaggcccagcaggccagcatcctgcagctgctgcagcag
ggccatctcaacgaggccttccagcaggccttgtctgcagctgacctgaacctggtgctg
tacgtgtgcgagaccatcgactcccagcaggtgtttggacagcacccgtgtcccctgcac
caagccgtgctgctctcactcattcaacagctctctacaagcctggccacacgcacagac
ctcaagatcagctatctggaggacgctgtgatgagcctggatcacggggacccagtcacc
agggaccacatgagtgccgtgctgtcgcaggtgcgacagaagctgttccagttcttgcag
caggaccctcacggcccgctgagcaagcgagcccgtcgcctcatgatgatgctgcagggt
ttggtcggccaatag
DBGET
integrated database retrieval system
