Electrophorus electricus (electric eel): 113573966
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Entry
113573966 CDS
T05787
Symbol
blm
Name
(RefSeq) Bloom syndrome protein isoform X1
KO
K10901
bloom syndrome protein [EC:
5.6.2.4
]
Organism
eee
Electrophorus electricus (electric eel)
Pathway
eee03440
Homologous recombination
eee03460
Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:
eee00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
113573966 (blm)
03460 Fanconi anemia pathway
113573966 (blm)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
eee03032
]
113573966 (blm)
03400 DNA repair and recombination proteins [BR:
eee03400
]
113573966 (blm)
Enzymes [BR:
eee01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
113573966 (blm)
DNA replication proteins [BR:
eee03032
]
Eukaryotic type
DNA Replication Termination Factors
Other termination factors
113573966 (blm)
DNA repair and recombination proteins [BR:
eee03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecQ family DNA helicases
113573966 (blm)
Bloom's syndrome complex (BTR)
113573966 (blm)
FA (Fanconi anemia) pathway
113573966 (blm)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
BLM_N
DEAD
BDHCT
Helicase_C
RecQ_Zn_bind
HRDC
RQC
Syntaxin
ResIII
Helicase_Sgs1
Motif
Other DBs
NCBI-GeneID:
113573966
NCBI-ProteinID:
XP_026860351
LinkDB
All DBs
Position
Unknown
AA seq
1448 aa
AA seq
DB search
MSTLPQNNLKEQLERHCSVVAQSKLSLAKPKPGAFLFKKKSTPGINKTEVPQKVTGTNVF
ASRSVNVPRSCEITKTPLKFPYKPERPPPKFNFTAPSKTKTQTTNPLTNPFAVSKHTPAQ
SVQSLPEPDNIPADPNGDKTLGLVGADNSFGVHLDDWDDFDDFETPIKGRAASQSPGTLV
KKSSGQDKEISPKTDADKGANTIKNGALPIVQDIATSGIQQITTENPLAEQYHAHAGPAG
GEPDDSPIKTTKRRLTSLQLKPLLSDSEDESVTDVSRPNEKTEEKRSSKIEHNSDIINVD
DSPTHNMPEDNLDFIPPSPVPEDRSASFSTLEKRKSALAHAERIVASPKGSMSSFQGTLD
VPAKDSKDPSDALYSVMESICCLVDTIPEHELITLTCGTHLLLQRAHRKRILADAASLGN
FSSNRGATPEPRVLQRASPGVATPLTSGKGDRAQSCFQFRKSITSIMSMDSSNSVFVDSD
CVIGGVETPGGSWNPNPSLNLLMNGERRKASSLNCGNGSVLRGECSSRMSLNKANGHSVD
LEQMELSFSPSKPSKADRSNQQRKAGSSTVESEFLNSRADTEPDDFYIDDFDIDDLNESD
IPDYYDEPVDSSASRNSSVLLQPVYEVGSSKSCVRKPNITPTAVVKPTKPPSPEVTFRNP
AHDRFRGFSFPHSPEMMKIFHKKFGLHQFRFNQLEAINATLLGEDTFVLMPTGGGKSLCY
QLPACVSAGVTVVISPLRSLIVDQVQKLTTLDIPATSLSGDKSDNEAARIYMQLSRKDPI
IKLLYATPEKICASGRMVSALQNLYERGLLARFVIDEAHCVSQWGHDFRPDYKRMHELRQ
KFPSVPIMALTATATPRVQKDILNQLVMTRPQVFTMSFNRHNLKYVVLPKKPKKVDEDCI
NWIQKHHPRDSGIVYCLSRNDCDSMADSLQRAGIAALAYHAGLNNSNREYVQNKWINQDG
CQVICATIAFGMGIDKPDVRYVIHASLPKSVEGYYQESGRAGRDGEISHCVLFYTYSDVI
RIKRLIAMDKDGNHHSKATHINNLHSMVHFCENVAECRRIQLLAYFGEHKFNADFCKEHP
EVICDNCARPHQYKMRNVTEDVERIVHFVQEYCEKIGSRYGRSSQQNRLTLNMLVDIFLG
SKSARIQTGMYGTGAAYSRHNADRLFKKLVLDNILMEDLYITNNGQAVAYISAGPKAMNV
LSGSLQVEFHETESASSIRKHKASVTRSVSKREEMVKKCLEELNELCKKLGKVFGLHYYN
IFSTSTLKKIAETLSADPEVLLQIDGVTEDKLEKYGAELIELLQKYSEWQLPVDDQAESS
GWIDTTCGRGEEDAEGYDEDGSSSTYFSTGQGGKRKKAPFARKPKRRRGYASQNSSKSSC
NGSWRSSKGGSRGAGRGAGRGAGQGAGRGAGGSSRIAAPSGRRPGFMALPIPHSTSRPFL
KPALSHFS
NT seq
4347 nt
NT seq
+upstream
nt +downstream
nt
atgtcgactctccctcaaaacaatttgaaagagcaacttgagcgacactgtagtgtcgtc
gcacagagcaagttgtctctggccaagccaaagcctggggcatttttgttcaaaaagaag
tctacaccaggcattaataaaactgaagttccccaaaaggtaactggcacaaatgtgttt
gcaagccggagtgtcaatgttcctcgcagctgtgaaataacaaagactcctttgaaattt
ccatacaagcctgaaagaccacctccaaaattcaacttcactgcacccagcaaaaccaag
acacagaccaccaacccattaaccaacccatttgcagtgagtaagcacacgcctgcccag
tctgtccagtcactaccagaacctgacaacatccccgctgatcctaatggggataaaacc
ctaggattagttggggctgacaactcatttggagttcacttggatgactgggatgacttt
gatgattttgaaactccaatcaagggaagggcagcatcacaaagccctgggactcttgtg
aaaaaatcatctgggcaagacaaggaaatatcccctaaaactgatgctgacaagggtgct
aataccattaaaaatggagctttgcctatagtgcaagacattgcaacttcaggaattcag
cagattacaacagagaacccccttgctgaacagtaccatgcccatgcaggacctgctggt
ggggagcctgatgactcgcccatcaagacaaccaagcgtcgtctgacttcactccaactc
aagccactgttgagtgacagtgaggatgagagtgttactgacgtttcaaggcctaatgaa
aaaacagaagaaaagcgttcatcaaaaattgaacataattcagacatcataaatgttgat
gacagtccaactcacaatatgccagaggacaacttggattttattccaccctcccctgtt
cctgaagacaggagtgcatctttctcaacactagagaaacgaaaatctgctcttgcccat
gctgagagaattgttgcttcaccaaaagggtctatgtcaagcttccaaggaactctggat
gtacctgctaaagattcaaaagatcccagtgatgctctctacagtgttatggagtctatc
tgttgtctagtggacacgatccctgagcatgagcttataaccttgacttgtggcacacat
ctgcttttacagagagcgcacaggaaaaggattcttgctgatgctgcatcactgggaaac
ttttcatcaaacagaggagcaacccctgagcccagggtgctccaaagagcaagtcctggt
gttgcaacccctctgacttcaggcaaaggagaccgcgcacagagctgctttcagttccga
aagtccatcacctccatcatgtccatggatagcagtaacagtgtgtttgtagactcagac
tgcgtcatcggtggtgtggagaccccaggtggctcctggaaccccaacccttccctcaac
ctgcttatgaatggagagaggagaaaggcatcaagcttgaactgcggtaatggcagtgtt
ctgagaggggagtgctcctccaggatgtccctcaataaggctaatggtcattctgtggat
ctagagcagatggaactttccttttcacccagcaagccctcgaaggctgaccgaagtaat
cagcagagaaaagcaggaagcagcactgtagagtctgaatttttaaattcacgagcagac
acagaaccagatgacttttatattgatgactttgacattgatgacctcaatgagagtgat
atcccagattactatgatgagcctgtggattcttcagcatcaaggaattcctctgttctc
ctacaacctgtttatgaagtaggatcttctaagtcatgtgtaagaaagcccaacataacc
cccactgctgtcgtaaaacctactaaaccaccttctcctgaggttacgttcaggaatcca
gcacatgaccgcttcaggggcttcagctttcctcactctccggagatgatgaagatcttt
cacaaaaagtttggtcttcatcagtttcgcttcaatcagctagaagccatcaatgctacc
ctgctcggagaggacacttttgtgctgatgcctacaggtggaggtaaaagcctgtgctac
cagctgcccgcctgtgtctctgctggggtgacggtggtgatctcaccactgcgttctctt
attgtggaccaggttcagaaactcaccacattagatatcccggccactagcttatctggg
gataaaagtgacaatgaagctgctcgaatctacatgcagctgtctcggaaagatcccatc
atcaaactcctttacgctactccagagaagatctgtgccagtgggagaatggtcagtgcc
ctgcagaacctgtatgagcgaggtctgcttgctcgctttgtcattgatgaggcccactgt
gtcagccagtggggacatgactttaggccagactacaagcgcatgcatgaacttcggcag
aaatttcccagtgttcctatcatggcactgacagccactgccacccctcgagtccagaag
gacatcctcaatcagctggtcatgactcggccccaagtgttcacaatgagcttcaacaga
cacaatcttaaatatgtcgtattgcccaagaaacccaagaaagtggatgaggactgcatt
aactggatccagaaacaccatccacgtgactctgggatcgtgtactgcttgtcccggaat
gactgtgacagcatggcggacagtcttcagagggctgggattgcagcgctggcgtaccac
gcagggctaaacaacagcaaccgagagtatgtccaaaacaagtggatcaaccaggatggg
tgccaagtcatatgtgccaccattgcatttggcatgggcatcgacaagcctgatgtgcgg
tatgtgatccatgccagtctgcccaagtcagtggagggctactaccaggagtcaggcaga
gctggccgggatggagagatctcccactgtgtcctcttctatacctactctgatgtcatt
cgcatcaaaagactcatcgctatggacaaagatggcaaccaccattccaaagccacccac
atcaacaacctgcacagcatggtgcatttctgcgagaatgtggccgagtgtaggaggatt
cagctgcttgcatacttcggggagcataaattcaatgctgacttctgtaaggagcaccct
gaggtcatctgtgataactgtgcccggccccatcaatacaaaatgagaaacgtgactgag
gacgttgagaggattgtgcacttcgtgcaagaatactgtgagaagattggcagcagatat
ggcagatctagccagcaaaacagacttactctgaatatgctggttgacattttcttgggc
tcaaaaagtgcccggatccaaacgggcatgtatggaaccggagcagcctactccagacac
aacgcagacaggctctttaaaaagcttgtgctagataacatcctcatggaagacctgtac
atcactaataatggccaggctgtggcctacatctcagctggccctaaagccatgaacgtc
ctgagtggcagcttgcaggtggaattccatgaaactgagagcgcctcgagcatcaggaag
cataaagcctcggtcaccagaagcgtatcgaagagggaggagatggtcaagaagtgtctg
gaagagctcaatgagctatgcaagaagctgggcaaagtgttcggtcttcactactacaac
atcttctccacgagcactctaaaaaagatcgctgaaactctgtcggctgatcctgaggtg
ttgctgcagattgatggtgtgactgaggacaagctagagaagtatggagcagagctcatc
gaactgctgcagaaatattcagaatggcagctgcctgttgacgatcaggctgagagctca
gggtggatcgacaccacatgtggccgtggtgaagaagatgcagaaggttatgacgaagat
ggcagctcatcaacctatttcagcacaggccagggggggaagaggaaaaaagctcccttt
gcacggaagcccaaacggcggaggggctacgccagccagaactcatccaagagtagttgc
aatggaagctggcgttcatctaaaggaggctcccgaggcgcagggcgaggagcagggcga
ggagcaggtcagggagcaggtcggggagcgggcggaagctccaggattgcagcaccgtca
gggagaagacctggcttcatggccctgcccatcccccacagcacctcacggccattcctc
aagccagccctctctcacttcagctga
DBGET
integrated database retrieval system
