KEGG   Electrophorus electricus (electric eel): 113574498
Entry
113574498         CDS       T05787                                 
Name
(RefSeq) roquin-1-like
  KO
K15690  RING finger and CCCH-type zinc finger domain-containing protein
Organism
eee  Electrophorus electricus (electric eel)
Brite
KEGG Orthology (KO) [BR:eee00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03000 Transcription factors [BR:eee03000]
    113574498
   04121 Ubiquitin system [BR:eee04121]
    113574498
Transcription factors [BR:eee03000]
 Eukaryotic type
  Zinc finger
   Cys3His zinc factors
    113574498
Ubiquitin system [BR:eee04121]
 Ubiquitin ligases (E3)
  Single Ring-finger type E3
   Other single Ring-finger type E3
    113574498
SSDB
Motif
Pfam: Roquin_1_2-like_ROQ ROQ_II zf-RING_5 zf-RING_UBOX zf-RING_2 zf-C3HC4_4 zf-C3HC4_3 zf-C3HC4 zf-CCCH Prok-RING_4 zf-CCCH_4 zf-CCCH_UNK zf-C3HC4_2 zf_CCCH_4 FYVE Baculo_IE-1
Other DBs
NCBI-GeneID: 113574498
NCBI-ProteinID: XP_026861261
LinkDB
Position
Unknown
AA seq 1114 aa
MPVQAPQWTEFLLCPICTQTFEENVRRPISLGCGHTVCKMCLNKLHRKACPFDQTAISTD
IELLPVNTALLQLVCAQVPKPQPVTLVRGAEDTKHYDEARTCVEELALYLKPLSNTRGVG
LGSATQSLLSRPMQRKLVTLVHCQLVEEEGRVRAMRAARSLGERTVTELILQHQNPQQLS
SNLWAAVRARGCQFLGPAMQEEALKLVLLALEDGSALSRKVLVLFVVQRLEPRFPQASKT
SIGHVVQLLYRASCFKVTKRDEDSSLMQLKEEFRTYEALRREHDSQIVQIAMEGGLRIAP
DQWSSLLYGDQSHKSHMQSIIDKLQTPASFAQSVQELTIALQRTGDPANLNRLRPHLELL
ADIDPSPDAPAPTWEQLDKGLVAVKTVVHGLVDFIQNHSKKGGDPQQAPQHSKYKTYMCR
DMKQKGGCPRGASCTFAHSQEELEKYRKMNKRLPIRKPLSQSLTQLNEMDVTCSQGLLPD
EGLVGEGLPHKSAIVANGLIQVGPGSGLSHLVSRGSDPSYNPVNKLGKADPGSLSAPGSP
PDLLDPMPKVVMPAPSHPRVARESLAGHKHTSIVPRVPQMPQYPPAQSEPYYPESRAPPA
ASQYESSHYPTGHAYPYTHMQPRYVRNPGPPADSGLSSYPDPYSYAPERQYTGHPSDPRY
AYPVHHNSRHPAYGGPPPTQSYTRDELGHRSPVPLDVPPPSQPQTTGASAYLPEPSRERY
GPESFSHLGQSRSYGRNIYARPQHSLDYLHRRRKEIMAQLEERKVVSPPPFASSPNPAHS
YDPSYSQEVRGQSHSMEETPPAFVSFREPDYAAQYSPWSCDTFVPYIGTKDMKSKEGMAV
GYMEMQNVDQGLREPALELQRRAAEVKDDDPIIPFGSLPTVSRFGAISRTSKSGYQPAGL
VPGPHAKHAGTAVDYNYGSHGGWSEASFPQHPTMSSQAHFSERLPPAAQEREQLRIELQQ
VNQQITQQTRLESSSSGVALQRETGSAAGQPPPVEWPTANVSCEQLSLELHQVEREIGMR
TREMAMEGHVAPVLKYKLVATSENGQSEHSLQREEHQLALSEGSNGLSSVVQDCGLASSS
MSSLTSKTSSLSLSSELVASSPDLSKNGVVHHCS
NT seq 3345 nt   +upstreamnt  +downstreamnt
atgcccgtacaagcgccgcaatggacggagtttctgttgtgtcctatctgcacccagacg
ttcgaggagaacgtgcgcaggcccatcagcctgggctgtggccacactgtctgcaagatg
tgcctgaacaagctgcaccgcaaggcttgccccttcgaccagactgccatcagcactgac
atcgagctgctgcctgtcaacactgcgctgctgcagctggtctgcgctcaggtacccaag
cctcagcctgtcacattagtgagaggtgctgaggacaccaagcattatgatgaagcccgc
acctgtgtggaggagctggctctctacctcaaacccctcagcaacacgagaggtgtaggg
ctgggcagtgctacccagagccttctcagcaggcccatgcagaggaagctggtaacactc
gtgcactgccagctggtggaggaggagggccgggtgcgggcgatgcgggcggcgcgctcc
ctgggcgaacgcacggtcacagagcttatcctgcagcaccagaaccctcagcagctctcc
tccaacctgtgggctgctgtccgagcacggggctgccagttcctcggccctgctatgcag
gaggaggctttgaagctggtgctgctggctctagaggatggttcagccctgtcccggaag
gtcttggttctgtttgtggtccagaggctggagccacgcttccctcaggcttctaaaacc
agcataggacatgtggtgcagctcctctacagagcctcctgctttaaggtgaccaagcgg
gacgaggactcctccctaatgcagttgaaggaggagttccgtacatacgaggccctgcgg
agggagcacgactcccagatcgtccagattgccatggaaggcggactgcgcatcgcccca
gaccagtggtcctcgctgctctacggggaccagtcccataagtcccacatgcagtccatc
atagacaagttgcagactccagcatcctttgctcaaagtgtacaggagctcaccattgca
ttacagagaacaggagacccagccaacctcaaccgcctcagaccacatttagagctgctg
gctgacattgaccctagcccagatgcccctgcacctacatgggagcagttggacaaaggg
ctagtggcagtgaagacagtggtacatggcctagtggacttcatccagaatcacagcaag
aaaggaggagacccacagcaggcccctcagcacagtaagtacaagacctacatgtgtcga
gacatgaagcagaagggaggctgtcctagaggagctagctgcacctttgcccattcccag
gaagaactggagaagtatcgcaagatgaacaagcgactgcccatcaggaagccactgagc
cagtctctgacccagctcaacgaaatggacgtcacttgcagccagggcctactccctgat
gagggcttggttggggagggactgccccacaaatcggccattgtcgccaatggcctcatc
caggtggggcctggatctgggctaagtcacctggtctcccggggctctgacccctcatac
aacccagtgaacaagctgggaaaggcagacccggggagcctcagtgcccctggttcacct
ccagacctattggacccaatgcctaaagtggtgatgcctgcgccatctcatcccagagtg
gcacgagagagcctggctggacacaagcacacgtccatagtccccagagtcccccagatg
ccccagtaccctccagcccagtctgagccatattaccctgaatccagagcacctccagct
gcctcccaatacgagtcctctcactatcctacaggtcacgcctacccttacacacacatg
cagcctcgctatgtccgcaaccctggcccacctgcagattcaggcttgtcatcctacccg
gacccctattcctatgccccagagcgccagtacacaggccatccatccgaccctcgatac
gcctaccctgtgcaccacaatagccggcacccggcttatggaggaccgccgccgacgcag
tcctacaccagggatgagctggggcacaggagcccagtgcccctggatgtacctccacca
tcccagccacaaacaacgggcgcctccgcctacctcccagagccctcacgagagagatat
ggccctgagagcttcagccacttggggcaaagcaggtcttatggcaggaatatctatgcc
cggcctcagcacagccttgattacctgcaccgccgcaggaaggagatcatggcccagctg
gaggagcggaaagtggtctcccctccgcctttcgcctcctctccaaacccagcccactct
tatgaccccagctacagccaagaggtcaggggacagagtcattccatggaggaaaccccc
cctgctttcgtgagcttcagggagccagattacgctgctcagtactctccatggtcatgc
gacacatttgtcccctacattggcaccaaggacatgaaatccaaagagggcatggctgta
ggctacatggaaatgcagaatgttgatcagggcctgagagaacctgccttggagctgcag
cgacgagcagcagaggtcaaagatgacgaccccatcatcccattcggctcgctgcccact
gtctcacgcttcggtgccatctcgcgcacatctaaatcgggctaccagcctgctggccta
gtgccaggcccccatgccaaacacgctggcactgcagtggattataattatggaagtcat
ggaggatggagtgaagcctccttcccccagcatccaactatgtcatctcaggcacacttc
agtgaacgtctgccccctgctgcccaggaaagagaacagctgaggatagagctccaacag
gtcaatcagcagatcacgcagcagactcgtttggagagctcgagcagtggggtggctctg
cagagggagacgggctcagcagctggccagcccccccctgtggagtggcccaccgctaac
gtgtcctgtgaacagttgagcctggaactgcatcaggtggagagggagatcggcatgagg
acgcgggaaatggccatggagggtcatgtagcgcctgttctaaaatacaaactagtagca
accagtgagaatggacagagcgaacacagtttgcagcgggaagagcatcagctagctctt
agtgagggctcaaatggtttgagctctgtcgtgcaggactgcggtttggctagcagcagc
atgtcctccctcaccagcaagacctcctcactcagcctgtcgtccgagctggtggccagc
agcccagatctgtcaaagaacggggtggttcaccactgctcctag

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