Electrophorus electricus (electric eel): 113576330
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Entry
113576330 CDS
T05787
Name
(RefSeq) polyadenylate-binding protein 4-like isoform X1
KO
K13126
polyadenylate-binding protein
Organism
eee
Electrophorus electricus (electric eel)
Pathway
eee03015
mRNA surveillance pathway
eee03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
eee00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
113576330
09123 Folding, sorting and degradation
03018 RNA degradation
113576330
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
eee03019
]
113576330
03041 Spliceosome [BR:
eee03041
]
113576330
Messenger RNA biogenesis [BR:
eee03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
eIF4F and regulatory proteins
113576330
mRNA cycle factors
Stress granule specific factors
113576330
Spliceosome [BR:
eee03041
]
Complex C
Other components
Complex C specific factors
113576330
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RRM_1
MLLE
RRM_7
RRM_5
RRM_10
RBD_RDR6
POP1_C
Motif
Other DBs
NCBI-GeneID:
113576330
NCBI-ProteinID:
XP_026864135
LinkDB
All DBs
Position
Unknown
AA seq
636 aa
AA seq
DB search
MNTASAGSYPMASLYVGDLHPDITEAMLYEKFSPAGPVLSIRVCRDMITRRSLGYAYVNF
QQPADAERALDTMNFDVVKGKPIRIMWSQRDPSLRKSGVGNVFIKNLDKSIDNKALYDTF
SAFGNILSCKVVCDENGSKGYAFVHFETQDAADRAIEKMNGMLLNDRKVFVGRFKSRKER
EAELGAKAKEFTNVYIKNFGEDMDDDRLKEIFDKYGKTLSVKVMTDPAGKSRGFGFVSYE
KHEDANKAVEEMNGTEMNGKAVFVGRAQKKMERQAELKRKFEQLKQERISRYQGVNLYIK
NLDDTIDDEKLRKEFSPFGSITSAKVMLEEGRSKGFGFVCFSSPEEATKAVTEMNGRIVG
SKPLYVALAQRKEERKAHLTNQYMQRIAGMRAMPANAIINQFQPASGYFMPAVPQAQNRT
TYYAPSQLAQMRPNLRWQQQGGRAQGGFQGMPPSMRQPSPRTNIRHVGPGSSTQGPRGIP
TGAQRGAGTGQLGGRPGMGVTTPRTMPPYKYATSVRSSQPQLVQPMALPQTQPAVHVQGQ
EPLTASMLAAAPPQEQKQMLGERLFPLIQAMHPSLAGKITGMLLEIDNSELLHMLESHES
LRSKVEEAVAVLQAHQAKKDATQKVGVNSATAAATS
NT seq
1911 nt
NT seq
+upstream
nt +downstream
nt
atgaacacggcgagcgcggggagttacccgatggcttctctgtacgttggcgacctccac
cccgacatcacggaggcgatgctgtacgagaaattcagcccggccggaccggtgctttcc
atccgcgtctgccgcgacatgatcacgcggcgctcgctgggctatgcgtatgtcaacttc
cagcagcccgcggacgccgagagggccctggacaccatgaacttcgacgtggtgaaggga
aaacccatcaggataatgtggtcccagagggatccgtcgctccgcaagtctggggtcggg
aacgtcttcatcaagaacctggacaagtccattgacaacaaggccctctacgacaccttc
tccgccttcggaaacatcctgtcctgcaaggtggtgtgtgatgagaacggctcgaagggc
tacgcgtttgtccacttcgagacgcaggatgccgcggaccgtgccatcgagaagatgaat
gggatgctcctgaatgatcgcaaggtgtttgtggggaggttcaagtcccggaaggagaga
gaggcagagctgggcgccaaagccaaagaattcaccaatgtctacatcaagaactttgga
gaggacatggatgatgacagactgaaagagatctttgataaatacggtaaaactctgagc
gtaaaggtcatgacagaccctgcggggaagtccagagggttcggcttcgtcagctacgag
aagcacgaggatgcaaacaaggcggtggaggagatgaatggcacagagatgaatggcaag
gccgtgttcgttggacgcgctcagaagaagatggagcggcaggcagaactcaagcggaag
tttgagcagctgaagcaggagagaatcagcaggtaccagggtgtgaacttgtacattaag
aatctggatgacaccattgatgatgagaaactgcgtaaggaattctctccgtttggctcc
atcaccagtgcaaaggtgatgctcgaggagggtcgctccaagggcttcggcttcgtgtgc
ttctcatcgccggaggaggccaccaaggcggtgactgagatgaacgggcgcatcgtgggc
tccaagccgctctacgtggccctggcgcagcgcaaggaggagcgcaaggctcacctcacc
aaccagtacatgcagcgcatcgctggcatgcgtgccatgccagctaacgccatcatcaac
cagttccagcctgccagcggttacttcatgccagccgtgccgcaggctcagaacagaacc
acgtactacgcgcccagccagctggcgcagatgcggccaaacctgcgttggcagcagcag
ggaggcagagcgcagggtggcttccagggcatgcccccctccatgcgtcagcccagccca
cgcaccaacatccgccacgttggtcccggcagctccacgcaaggacctcgcggaatacca
acaggtgcccagagaggggctggtacgggtcagctcggtggccgccctgggatgggcgtg
accacgccccgtaccatgccgccttacaagtatgccacctctgtgcgaagcagccagcct
cagctggtgcaacccatggccctaccacagacgcagcctgccgtgcatgtgcaaggtcag
gagcccctgacagcctccatgttggccgctgccccgccccaggagcagaagcagatgctg
ggcgagcgtctcttccctctgatccaggccatgcacccgagcctagcaggaaagatcacc
ggaatgttgcttgagatcgataactctgaactcctgcacatgctggaatcccatgagtcc
ctgcgctccaaggtggaggaggctgtagctgttctccaggctcaccaggcgaagaaagac
gccacccagaaagtaggagtcaattctgccaccgcggctgctacgtcatga
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