Electrophorus electricus (electric eel): 113576498
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Entry
113576498 CDS
T05787
Symbol
ndc1
Name
(RefSeq) nucleoporin NDC1 isoform X1
KO
K14315
nucleoporin NDC1
Organism
eee
Electrophorus electricus (electric eel)
Pathway
eee03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
eee00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
113576498 (ndc1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
eee03019
]
113576498 (ndc1)
Messenger RNA biogenesis [BR:
eee03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
113576498 (ndc1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Ndc1_Nup
Motif
Other DBs
NCBI-GeneID:
113576498
NCBI-ProteinID:
XP_026864394
LinkDB
All DBs
Position
Unknown
AA seq
672 aa
AA seq
DB search
MFSVSQNCWFIRKVVTWRAVASIAWSVLLLPVTTTLFVFLVRLSLFHPVQWIAECFALLT
APSTIFPLFLLSGVVLVIGFFNLKYYTVVPSIPCSRVALLAKLLHPRQCVHSLVHCAVGM
VVMWCASVIAGVRYRTLSSPCTGSESGSVPETCLNEYHLFFLLAGAFMGYSHSFLGVVQN
MNYVSFQIILQYKYMRFKGSLASVVKCSALQSLHSVRNYVALYYFFGHLPRAWILNMLNL
QMDSALCSLDSLAGLLDPSLLYHLWISGTFLLLTWYITVLLFRIYVTEPYRFPVQSTFAE
DTDQCLPKVLTEKDVLVMKFLALQDLALLARYSPSCRQEVFSLSQPGGHPHNWNAISKEC
LALLGELTQRLVAHHDTVASNGRAKRPSVSSDARSVSSGNSVMSGAEDLLQTPHPSAIIK
TPGSVFKSSMMGLSSPMTVPFTPDLDSPFSSPAVRRLAGHQVPPSPWYGSVQSPHVMRRG
PKLWSTSTDSQANGSPPPTPAPTPSTLRPEQKSSFLAQWLQNRKEQVKSFLTKRVMIAYL
FNKLPEASSQALFADSQAHIWALEGLSHLVAASFSEDKYGVVQTTLPSILSCMLTLQEAV
DRHFKLPHASSKPVKTTCSMGDATYKTLRFALRAALKTAIYRITSTFGEHLNAVCISVEH
QKRLQQFMEYRE
NT seq
2019 nt
NT seq
+upstream
nt +downstream
nt
atgttttctgttagtcaaaattgctggtttatacgaaaggttgttacttggagagctgta
gccagtattgcgtggtcggtgctgcttctgcctgtcacaacaacactttttgtgtttctt
gttagacttagtttattccaccccgtccagtggattgcagaatgctttgctcttttgact
gccccaagtaccatctttccccttttcctgctttctggagtggtacttgtgattggcttt
ttcaacttgaaatattacacagttgtcccctccatcccttgctcgcgagtggctctcctg
gcaaaattgcttcacccacggcagtgcgtccactcactggtacactgcgctgtcggcatg
gtggtgatgtggtgcgcctccgtcatcgctggcgtccggtatcgtactctcagctcccct
tgtactggaagtgagagtggcagtgttcctgagacatgtctaaatgagtatcacctgttc
ttcctactggctggagctttcatgggatacagtcacagtttcctgggagtggtccaaaac
atgaactacgtgtcctttcagatcatactgcaatataagtacatgcgctttaagggatct
ctggcatctgtggtgaaatgcagtgcccttcagtctttacattcagtgaggaattatgtt
gccctttactatttctttggacatcttcccagggcatggatcttgaacatgctgaatctt
cagatggacagcgctctctgttccttggactccttggctgggctgctggatccctcactg
ctgtaccacctttggattagtggtaccttcttgctgctcacctggtacatcactgtgctg
ctgttcaggatctatgtcacagagccttacagattcccagtacagtccacatttgctgag
gacacagaccagtgtcttcctaaagtcctgactgaaaaggatgtcttggttatgaagttc
ctggccctgcaggatctggctttgctggcccggtattccccttcatgcagacaagaagtc
ttcagtctaagtcagccaggtggccaccctcataactggaacgccatcagcaaggagtgc
ctggcgctcttgggcgagttaactcaacgccttgttgctcatcatgataccgtggcttcc
aatggccgagcgaagcgtccatctgtcagcagcgatgccagatctgtctcctcagggaac
tcggtgatgtctggggcagaggacctgctgcagactcctcatccaagtgccataatcaag
acccctggctcagtcttcaagtcttccatgatgggtttgagcagccccatgactgtcccc
tttacgccagacctggatagccccttctccagccccgccgtccgccggctggcagggcac
caggtgccaccctcaccctggtacggctcagtgcagagcccgcatgtcatgaggagaggc
cccaaactctggagcacctccacagactctcaggccaacggcagtccaccaccaacccct
gctcctacacccagcactctgcgtccagaacagaagtccagtttccttgcccagtggctc
cagaacaggaaggaacaggttaaaagtttcttgacaaagcgggtgatgatagcctattta
tttaataagcttccagaagcttcaagccaagctttgtttgctgacagccaagctcacatt
tgggccctggaaggattgtctcatctggtggcagcttctttttctgaggacaagtatgga
gtagtacagactacattacccagcattctcagttgcatgctgaccttgcaagaggctgtg
gacaggcacttcaagctccctcacgcttctagcaagccagtgaagactacctgcagtatg
ggagacgccacatacaaaaccctccgctttgccttgagagcggcactgaagacggccatc
tacaggataacatccacatttggagagcacttgaatgccgtctgtatatcagtggagcat
cagaaaagacttcagcagttcatggaatacagagagtag
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