Electrophorus electricus (electric eel): 113576553
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Entry
113576553 CDS
T05787
Symbol
cpsf6
Name
(RefSeq) cleavage and polyadenylation specificity factor subunit 6 isoform X1
KO
K14398
cleavage and polyadenylation specificity factor subunit 6/7
Organism
eee
Electrophorus electricus (electric eel)
Pathway
eee03015
mRNA surveillance pathway
eee03250
Viral life cycle - HIV-1
Brite
KEGG Orthology (KO) [BR:
eee00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
113576553 (cpsf6)
09125 Information processing in viruses
03250 Viral life cycle - HIV-1
113576553 (cpsf6)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
eee03019
]
113576553 (cpsf6)
Messenger RNA biogenesis [BR:
eee03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Pre-mRNA cleavage factor Im (CFIm)
113576553 (cpsf6)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RSLD_CPSF6
RRM_1
PRP38_assoc
Motif
Other DBs
NCBI-GeneID:
113576553
NCBI-ProteinID:
XP_026864479
LinkDB
All DBs
Position
Unknown
AA seq
566 aa
AA seq
DB search
MADGVDHIDIYADVEEEFNQETDYPVHEQIDLYDDVISPSANNGDAPEDRDYLDSLPAPG
GSEGNKGAPPNVVYTYTGKRIALYIGNLTWWTTDEDLTEAIRSIGINDVLEIKFFENRAN
GQSKGFALVCVGSDASSRKLLDLLSKRELHGQNPIVTPCNKQSLSQFELQSRKSTQSGQM
SGEGKAGPPGVGPRGGFPLGRGRGRFPGPAGPGGDRFPGPVGPGAPPPHFPGGMQGPPRP
PPGPPGPPGPPGRGDRPPPPVIFPGQFGQPPMGPMPPGPPPPGYGPPPGPPPPQQGPPPP
GPFPPRPPGPIGPPLALAPPPHMQGPPPGGPPPAPHVNPAFFPPPGNNNMPSSDSRGPPP
NDPYGRPPPYDRGDYGPGSHLRAPVVCGFDPWINEGLVDLKNGGLHLHSSSDQGEMDAAR
TPLSEAEFEEIMNRNRAISSSAISRAVSDASAADYGSAIETLVTAISLIKQSKVSADDRC
KVLISSLQDCLHGIESKSYGSASSRRERSRERDHSRSREKSRRHKSRSRDRHEDYYRERS
RERDRHRERDRDRERDRDREREYRHR
NT seq
1701 nt
NT seq
+upstream
nt +downstream
nt
atggctgacggtgttgaccacatcgacatttacgctgatgtagaagaagagttcaaccag
gaaacagattacccagttcatgaacagatagatttgtatgatgatgtcatttcgccatct
gccaataatggggatgcacctgaagaccgagactatctggacagtctacccgcacctggg
ggctcagaggggaacaaaggagctccacccaatgttgtctatacctacacaggcaaacgg
attgctctgtacataggcaacctcacttggtggaccacagatgaggatctgacagaggcc
attcgctccataggcattaatgatgtcctggagatcaagttttttgagaatagggccaat
ggccagtctaaagggtttgctctggtgtgtgttggctcagatgcctcctccagaaagctg
ctggacctgctatctaagcgggagcttcatggccagaaccccatcgtcaccccctgcaac
aaacagtcactgagccagtttgagctgcagtcgcgaaaaagcacacagtcagggcagatg
tcaggggagggtaaggctgggcccccaggcgtgggccctcgtggtggtttccccctgggc
aggggtcgagggcgctttccaggccctgctggccctggaggtgaccgcttccctgggcct
gttggacctggagcacctccaccacactttccaggtggtatgcagggacctcctcgccct
ccccctggcccccctgggcctcctggccctcctggtagaggtgaccggccacctccccct
gtaatttttcctggccagtttggtcaacctccaatgggtcctatgcctcctggccctccc
ccaccaggctatggtccacctcctggaccacctcccccacaacaaggtcctccccctcca
ggtccatttccaccccgcccccctggtcctataggtccacctttggctctagctccaccc
cctcacatgcagggtccccctcctggtggtccacctccagccccccatgtgaaccctgcc
ttcttccctcctccgggaaacaacaatatgccctcatcagatagcagaggtccaccacca
aacgatccatacggacgcccacctccgtatgacagaggagattatggccctggcagtcac
ctcagagcccctgtagtgtgtgggtttgatccctggattaatgaggggttggttgatctg
aaaaacggtggcctgcacttgcacagttcaagtgatcaaggggagatggatgctgctcgg
acccctctgagtgaggcggagtttgaggaaattatgaacaggaacagagctatttccagc
agtgctatatccagggctgtatcagatgccagtgcagcggactatggcagtgccattgag
accctggtgactgccatttccttaatcaagcagtcaaaagtctcagctgatgaccgctgc
aaagtgcttatcagctcactgcaggactgcctgcatggcattgaatcaaagtcctatggc
tcagcctccagtagacgagaaaggtctagggagagagaccacagtcgttctcgtgagaag
agccgccggcacaagtctcgcagccgtgaccgtcacgaggactactaccgggagcgcagc
cgcgagagagaccgccatcgcgagagagaccgtgatcgtgagagagaccgtgaccgagag
agggaatatcgtcaccgttag
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