Electrophorus electricus (electric eel): 113576573
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Entry
113576573 CDS
T05787
Symbol
col4a5
Name
(RefSeq) collagen alpha-5(IV) chain
KO
K06237
collagen type IV alpha
Organism
eee
Electrophorus electricus (electric eel)
Pathway
eee04382
Cornified envelope formation
eee04510
Focal adhesion
eee04512
ECM-receptor interaction
eee04518
Integrin signaling
eee04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
eee00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
113576573 (col4a5)
04518 Integrin signaling
113576573 (col4a5)
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
113576573 (col4a5)
09142 Cell motility
04820 Cytoskeleton in muscle cells
113576573 (col4a5)
09150 Organismal Systems
09158 Development and regeneration
04382 Cornified envelope formation
113576573 (col4a5)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
eee04147
]
113576573 (col4a5)
00536 Glycosaminoglycan binding proteins [BR:
eee00536
]
113576573 (col4a5)
Exosome [BR:
eee04147
]
Exosomal proteins
Exosomal proteins of other cancer cells
113576573 (col4a5)
Glycosaminoglycan binding proteins [BR:
eee00536
]
Heparan sulfate / Heparin
Extracellular matrix molecules
113576573 (col4a5)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Collagen
C4
Motif
Other DBs
NCBI-GeneID:
113576573
NCBI-ProteinID:
XP_026864537
LinkDB
All DBs
Position
Unknown
AA seq
1682 aa
AA seq
DB search
MNKKFKSLINLVVVLVLITLCIGVQESESAACYGCGTGSKCDCSGVKGEKGDRGLPGLQG
HPGIPGFPGPEGQIGPRGEKGDDGPHGPPGPKGIRGPSGLPGFPGTPGIPGIPGNDGPQG
PKGVAGCNGTKGERGYPGSPGIPGIDGQQGPPGLPGQKGEPGEVIQEEHPGNQGEPGGQG
EPGIRGLPGPPGLAGPLGPPGPKGHQGLPGHPGPPGPKGNMGLNFQGPKGEKGESGLPGP
PGPPGQVSELTSEQQTVIQRGEKGDRGSPGPPGDPGLPGPPGSTGSQKGEKGEPGEPGKR
GKPGKDGDPGPHGLPGSKGQGGIPGFPGRDGERGQKGEPGYPGPPGEVIGRPPINQEGPK
GDSGSPGPPGRKGERGSPGLSGPPGHPGSPGIGSQGPPGPPGYPGERGQKGDEGQPGVSL
PGLPGRPGPPGLQGPPGPPGPQGISNGGDNCISGAPGLPGIHGEKGYLGERGQKGEKGET
CVNCFSNGNPVPGPSGPPGPNGFPGIPGIPGPKGQKGIPGNPGLMGAPGLTGPQGLPGVP
GQKGDPGDAIQLDGMKGEKGDTGFPGPPGLHGLDGRPGRDGFPGQPGPKGVSGSLLVKGQ
RGPPGEPGPIGPEGDRGPPGPPGFGQQGPPGEKGLQGVSGRPGPPGLSGQKGEPGHSISE
KGAPGLPGRDGDRGLPGISGNPGPPGQPGFPGLPGPKGEPGLPGIGLPGPPGAKGFPGIP
GSPGSPGIPGPPGADGLPGQSGLQGSKGDPGFGIPGAQGPPGAPGSKGVPGAKGDPGFPG
NPGSPGRPGVNGVPGPKGDHGFPGQPGPPGISGPPAFGVQGPPGPPGPPGPSGPSGFPGV
KGEKGDLGPPGLDIPGLPGDPGSPGFPGSPGPPGPPGNPGTPGQDGLPGYPGTKGDIGVM
GTPGPTGNSGSPGVPGFPGPKGEDGFPGRPGSPGVHGPKGDKGDPGLPGPPGIFNPDVHK
GPKGEPGHSGLTGRPGEKGAAGLPGDKGFPGQDGRPGSPGPPGAKGEAGNPGLPGSPGIP
GIKGSMGEMGFPGPAGIKGNSGRPGPPGQPGSQGASGFPGPKGEPGTPGYGPPGPEGPKG
DTGSPGFPGSPGPKGQTGPPGLPGLPGNTGQKGEPGQQGFEGAPGLPGPKGADGLPGSPG
PNGAPGKAGEPGSQGPAGLPGEKGIAGRDGIPGPAGEKGEPGLPGRGIPGSPGFPGMPGP
KGDPGLPGPLGGPGFAGQKGESGPPGPPGAHGRQGPPGPPGQSVYGPKGLSGPPGPPGRA
GPPGPEGPRGLPGSGGQKGEKGFPGAPGLPGSQGLKGEYGPPGPRGPPGYPGIPGLKGDT
GFPGAPGSAGKKGEAGSKGNPGALGDCGDPGPPGPPGDPGIPIGPIEVKGNPGPPGPPGP
QGFKGPPGNPGQQGPPGLPGPPGDPGTDGPTGYMGPPGRKGDPGPSGAPGFPGNPGLPGA
DGPQGFPGPPGTAVAAHGFLITRHSQSTEVPLCPNDTTTIHDGYSLLYVQGNERAHGQDL
GTAGSCLRRFSTMPFMFCNINNVCNFASRNDYSYWLSTIEPMPMSMEPIRGESIKPFISR
CVVCEAPAMVIAVHSQTIQLPQCPLSWEPLWIGYSFMMHTSAGAEGSGQALASPGSCLEE
FRSAPFIECHGQGTCNYYGNSYSFWLATIDRHMMFSKPQSETLKAGNLETRVSRCVVCMK
KT
NT seq
5049 nt
NT seq
+upstream
nt +downstream
nt
atgaataaaaagtttaagagtctgatcaacctcgtcgtggtgctggtgttaattactctg
tgcataggggtacaggaatctgagtctgcggcctgttatggttgtggaacaggatcaaag
tgtgactgcagtggagtgaaaggggagaagggcgatagaggtttgccaggactacagggc
catccaggtataccagggtttcctggcccagaagggcaaattggacctcgtggggagaag
ggtgatgatggacctcatggacctccagggcctaaaggaataagaggaccttctgggctt
cccggatttccaggcacaccgggcattccgggtattccaggaaatgacggccctcaaggt
ccaaaaggagttgcaggctgtaatggaacaaagggtgagagaggatatccaggatcccca
gggatcccaggtatagatggacaacagggcccacctggtctgccaggtcagaagggagaa
cctggtgaagtcatccaggaggaacatcctggaaaccaaggggaacctggtggtcaagga
gaaccaggcatcagaggacttccaggaccacccgggctggcaggacccctcggtcctcct
ggccctaaaggtcaccagggtctacctggtcacccaggtccaccagggcctaagggaaac
atgggactgaacttccaagggccaaaaggagagaagggtgaatctgggttgccagggcct
ccagggccaccaggacaagtcagcgagcttacaagtgaacagcaaacagtcattcagcgg
ggagagaagggtgatcgtggctcacctggcccacctggagatcctggacttcctggacca
cctggttcaactggcagtcagaaaggagagaagggcgagccaggagaacctggaaagaga
ggcaagcctggtaaggacggagaccctggccctcatggattgccgggatcaaagggacaa
gggggaattcctggctttccaggaagagatggcgaaagagggcagaaaggtgaacctgga
tatcctggacctccaggagaggtgattggcagacctcccataaaccaagaaggacctaaa
ggggatagtggttccccaggaccccctgggaggaaaggagagagaggatcaccaggtctc
tcaggaccacctggtcatccaggttctccaggaatcggaagccaaggtccacctggtcct
cctggatatcctggagagagaggacaaaagggtgatgaaggacagcctggagtctctctt
ccaggtttgccaggaagacctggaccgccaggcttgcaaggaccaccgggacctcccgga
ccacaagggatatccaatggaggagacaactgcatcagtggggcgccaggacttccgggc
atccatggggaaaaaggatatttaggagagagaggccaaaaaggtgaaaagggagagaca
tgtgtgaactgcttctcaaatggaaaccctgtcccagggccttcagggccccctggaccg
aacggattcccaggcattcctgggatccctggtccaaaaggacaaaaaggtatccctgga
aaccccgggcttatgggtgcaccaggtttaacgggaccacagggtctgcctggagtccct
ggacaaaagggggatcctggtgatgccatccagcttgatggtatgaagggagagaaggga
gacacaggctttcctggccctccaggtctacacgggctggatggaagacctggtcgtgat
ggctttcccggacagcctggtcccaaaggagtatcaggttctctgctggtgaaaggtcag
cgtggtcctccaggtgagcctggtcccataggtcctgaaggagaccgaggtccccctggt
ccacctgggtttggccaacaggggccacctggagagaaaggactccagggtgtgtcagga
agaccaggaccccctggactgtcaggtcagaaaggtgaaccaggacactctatttctgaa
aaaggggcacctggactcccaggacgtgatggagaccgtggtctaccagggatctcaggt
aacccaggtccacctggacagcctggatttccaggattacctgggccaaaaggagagcct
ggtctgcctggcattggtttgccaggacctccaggtgctaaaggattcccgggtattcct
ggcagtcctggtagcccaggcattcctgggccacctggtgcagatggactgcctggtcag
tctggactccaagggtctaagggagaccctggctttggtattcccggtgctcagggtccc
ccaggtgcccctggcagtaaaggtgtacctggagctaaaggtgatcccggtttccctgga
aaccctggatcacctggccgaccaggtgtcaatggtgttcctgggcctaaaggtgatcat
ggttttcctggccagccaggtcctcctggcatttcaggcccccctgcctttggtgtacaa
ggtccacctggaccccctggacctcctggaccatcaggcccttctggtttccctggtgtg
aaaggcgagaaaggagaccttggtcccccaggtttagacattccaggtttgcctggagac
cctggaagccctggattccctggatctcctgggcctcctggcccccctggtaatcctggc
acccctggccaagatggactacctggataccctggaacaaagggagacataggtgtgatg
ggcaccccaggacccactggcaattctggtagccctggtgtaccaggcttccctggacca
aaaggggaggatggcttcccaggaaggccaggcagcccaggtgttcatggaccaaaaggt
gacaaaggtgatccaggtttaccaggcccacctggcatcttcaatccggatgttcataaa
ggtcccaagggagaaccaggacattcaggtttaactggtcgtccaggagaaaagggtgct
gctggtctcccaggtgataaaggtttccctgggcaggatggacgccctggttcacctgga
ccaccaggtgccaagggagaagctggaaatccaggattgccaggatctcccgggatacca
ggaataaaaggcagcatgggcgagatgggattccctggtcctgcaggaattaaaggaaac
tccggtcgacctggcccacccggacagcctggatcgcaaggagcatcggggttcccagga
cccaagggagagcctggaactccaggatatggcccaccaggacctgaagggcccaagggt
gacactggatctccaggctttcctggaagcccagggccaaagggtcaaacagggcctcca
ggccttccagggttacctggaaacactggccaaaagggtgaacctggacaacaaggattc
gaaggtgcacctggccttcctggtcctaagggtgcagatgggctgccaggttcacctggc
ccaaatggagcccctggaaaggcaggagagcctggctctcaaggcccagctggtttacct
ggagaaaaaggtatagctggtcgtgatggtattcctggacctgcaggagaaaagggagag
ccaggtcttccaggccgtggaattccaggttctcctggtttcccagggatgccaggtccc
aaaggagaccctggcttacctggcccgcttggtggccctggttttgcaggacaaaaaggt
gagagtggaccgcctggtccaccaggtgcccatggtcgtcaggggcctcctggtcctcct
ggccagtctgtgtatggcccaaaagggctatcaggtcctcctggtccccccggaagagca
ggtcctccaggtccagaggggcctcgtggccttccaggtagtggaggtcagaagggtgag
aaaggctttcccggagcccctggattacctggctcacaaggactgaaaggagagtatgga
cctccaggcccaaggggccctcctggctacccgggcattcctggccttaaaggagacaca
ggttttccaggcgcacctggaagcgcaggtaagaaaggcgaggcaggttccaaggggaat
cctggggctctcggtgactgcggcgaccccggtcctccaggacctcctggtgatccaggt
atacctataggtccaattgaggtgaagggtaaccctgggccgcctggtccccctggcccc
caaggtttcaagggtcctccaggaaacccagggcagcagggtccaccaggtctgcctggt
cctcctggtgacccaggtactgatggacctacaggatatatgggccctccaggaaggaaa
ggggatccaggaccaagtggagctccaggttttccgggtaatcccggccttcctggtgca
gatgggccccaggggtttcctggtcctccgggcacagccgtggctgcacatggcttcttg
atcacacgtcacagccagtccacagaagttcctttgtgtcccaacgacaccacgaccatt
cacgatggctactctctgctctacgtacagggcaacgagagggcccatggccaagaccta
ggtactgctgggagttgtctgcgtcgttttagcaccatgcctttcatgttctgcaacatt
aacaacgtgtgcaactttgcctcgcggaacgattactcctattggctgtccaccatcgag
cctatgcccatgagcatggagcctatcaggggagagagcatcaaacccttcatcagcaga
tgtgttgtatgtgaagccccagcaatggtgattgcagtgcatagccagaccatccaactg
cctcagtgtccactcagctgggagcccctgtggattggctactcctttatgatgcacact
agtgcaggtgcggagggctcgggtcaggctctggcctctcccggttcctgtctggaggag
ttccgctccgcccccttcatcgaatgccatggccaaggaacctgcaattactacggcaac
tcctacagcttctggcttgccaccattgacaggcacatgatgttcagtaagccacagtcg
gagacactgaaagcaggaaacctcgagacacgcgtgagccgctgtgttgtgtgtatgaag
aagacgtaa
DBGET
integrated database retrieval system
