Electrophorus electricus (electric eel): 113577126
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Entry
113577126 CDS
T05787
Symbol
ncbp1
Name
(RefSeq) nuclear cap-binding protein subunit 1
KO
K12882
nuclear cap-binding protein subunit 1
Organism
eee
Electrophorus electricus (electric eel)
Pathway
eee03013
Nucleocytoplasmic transport
eee03015
mRNA surveillance pathway
eee03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
eee00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
113577126 (ncbp1)
09122 Translation
03013 Nucleocytoplasmic transport
113577126 (ncbp1)
03015 mRNA surveillance pathway
113577126 (ncbp1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
eee03019
]
113577126 (ncbp1)
03041 Spliceosome [BR:
eee03041
]
113577126 (ncbp1)
Messenger RNA biogenesis [BR:
eee03019
]
Eukaryotic type
mRNA processing factors
5' end processing
Cap binding complex
113577126 (ncbp1)
Spliceosome [BR:
eee03041
]
Common components
Common spliceosomal components
Cap binding complex
113577126 (ncbp1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
MIF4G_like_2
MIF4G
MIF4G_like
AAA_11
FapA
AAA_13
Vfa1
GBP_C
EMC3_TMCO1
DUF1690
tRNA_bind_2
DUF1664
OmpH
Afi1
Importin_rep_6
Motif
Other DBs
NCBI-GeneID:
113577126
NCBI-ProteinID:
XP_026865412
LinkDB
All DBs
Position
Unknown
AA seq
796 aa
AA seq
DB search
MSRRRHSDENDGGQPHKRRRTSEPIEIEDRLESLICRVGEKSTSSLESNLEGLAGVLEAD
LPNYKNKILRILCAVARLLPEKLTVYTTLVGLLNARNYNFGGEFVEAMIRQLKETLKSNL
YSEAVYLVRFLSDLVNCHVIAAPSMVAMFENFVSVTQEEEILQVRSDWYVYAVLSCLPWV
GKELYEKKDVEMDRLLNQIDGYLKRRQKVHVPMLQVWTAEKPHPQEEFLDCLWAQVQKLK
KDRWQERHILRPYIAFDSVLCEALQHNLPPFTPPAHSDEALYPMPRVVFRMFDYTDAPEG
PVMPGSHSVERFVIEENLHCIIKSHWRERKTCAAQLLSYPGKNKIPLNYHIVEVIFGELF
QLPSPPHIDVMYTALLIELCKLQPGSLPQVLAQATEMLYMRLETMNTTCIDRFISWFSHH
LSNFQFRWSWDDWADCLTVDLEKPKPKFVREVLEKCMRLSYHQRIVDIVPPSFSALIPAE
PQYHYKYGDESNSSLPGYAVAIAVGNAIKNRASNEEILTTLKELPNPNQEEDDDEGDGFN
PLKIDVFLQTLLHLAAKSFSHSFSALAKFHEVLKTLTESDEGKLHILRVVYEAWRNHPQM
ISVLVDKMIRTQIVDCAAVANWIFSPDMAHDFTRFYVWEILHSTIRKMNKHVQKIQKELE
EAKDKLEKQQHKKQKDSGDEEDMEKNSEDEDGQLEEQIERLQEKVESAQSEQKNLFLVIF
QRFIMILTEHLVRCETGSVDINTCWYKNCIERLQQIFLMHHVTIQQYMGTLENLLFTAEL
DHHILAVYQQFCALQL
NT seq
2391 nt
NT seq
+upstream
nt +downstream
nt
atgtcaaggagaaggcacagcgacgagaatgatggtggacagcctcataaaaggaggagg
acgtctgagccaattgaaatcgaggatcggcttgaatcattgatttgcagagttggagaa
aagagtacctcttctttggagagtaatttggaaggtcttgcaggtgtcttggaagcagat
ctccctaattataaaaataaaatcttgcgcatcttgtgtgctgttgcacgactgttgcca
gaaaagttaacagtgtacactacactggtgggccttttaaatgcacggaactacaacttt
ggcggggaatttgttgaggctatgatcaggcagctcaaggagacactgaagtcaaacctc
tactctgaagcagtttacctggtgcgtttccttagtgacttggtaaactgccacgtcatt
gctgctccatccatggttgctatgtttgaaaactttgtcagtgtcacacaggaggaggaa
atactacaggtgcgctctgactggtatgtgtatgctgtgctgtcctgtttgccctgggtt
gggaaagagctctatgaaaagaaggatgtggaaatggatcgacttctcaatcagattgat
ggctatctgaagaggcggcagaaggtccatgtgcccatgctccaggtgtggacagcagag
aagccccaccctcaggaagagttcctggactgtctgtgggctcaggtgcagaagttgaag
aaggatcgctggcaggagcgtcacatcctgaggccgtacattgccttcgacagtgtgctg
tgtgaggccttgcagcacaacctgcccccattcaccccaccagcccactctgacgaggca
ctctaccccatgcctcgcgtcgtcttccgaatgtttgactacactgatgcccctgagggt
cccgtaatgcctggcagccactctgtggagaggtttgtgattgaagagaacctacactgc
atcatcaagtctcactggagagagaggaagacctgtgctgctcagttgctgagctatcct
ggcaaaaacaagattcctttgaactatcacattgttgaggtgatctttggggagctgttc
cagctgccttctcctccgcacattgatgtgatgtacacggcgttactgatcgagctctgt
aagctgcagcctgggtccctgcctcaagtccttgcccaggccacagaaatgctgtacatg
agactggagaccatgaacacaacctgcatagaccgatttatcagctggttctctcatcat
ctgagcaactttcaattcagatggagctgggatgactgggctgactgtttaacagtggac
cttgaaaaacccaagcccaaatttgtcagagaggtgttagaaaaatgcatgaggctgtcc
tatcaccagcggatagtggatattgtgcctcctagtttctctgctttaatcccagccgaa
ccacagtaccactacaaatatggagatgagagtaacagttctttgcctggctatgctgtg
gccatagcagtggggaatgccatcaagaaccgtgcctcgaatgaggagattctaaccacc
ttgaaagagctgcccaatcccaaccaggaggaggatgatgatgagggcgatggattcaat
ccactgaaaatagacgtgttcctgcagacactgcttcacctggctgccaagtccttcagc
cattccttcagtgcccttgccaaattccatgaagtgctaaagacgctaactgagagcgat
gaggggaagctgcacattctcagggtggtttatgaagcctggaggaaccacccacagatg
atctcagtgctggtggataagatgattcgcacacagatagttgactgcgctgctgtggcc
aactggatcttctctcctgacatggctcatgatttcaccaggttttacgtgtgggagatt
cttcactccaccatccggaagatgaacaagcacgtgcagaagatccagaaggagctggaa
gaggccaaggataagctggagaagcagcagcacaagaagcaaaaggacagtggtgatgaa
gaggacatggagaagaacagtgaagatgaggatggtcagcttgaggagcagattgagcgg
ctgcaggagaaggtggagtcagcgcagagtgaacagaagaacctcttcctcgtcatcttc
cagcgtttcatcatgatattgactgagcacttggtacgctgtgagacggggagcgtagac
atcaacacttgctggtacaagaactgcattgagcgactgcagcagatcttcctcatgcat
catgtgaccatccagcagtacatgggaaccttggagaacctgctcttcacagccgagctg
gaccaccacatcctggctgtgtaccagcaattctgcgcccttcagctatga
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