Electrophorus electricus (electric eel): 113577343
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Entry
113577343 CDS
T05787
Symbol
col25a1
Name
(RefSeq) collagen alpha-1(XXV) chain isoform X1
KO
K24356
collagen type XXV alpha
Organism
eee
Electrophorus electricus (electric eel)
Brite
KEGG Orthology (KO) [BR:
eee00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
00536 Glycosaminoglycan binding proteins [BR:
eee00536
]
113577343 (col25a1)
Glycosaminoglycan binding proteins [BR:
eee00536
]
Heparan sulfate / Heparin
Extracellular matrix molecules
113577343 (col25a1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Collagen
Motif
Other DBs
NCBI-GeneID:
113577343
NCBI-ProteinID:
XP_026865734
LinkDB
All DBs
Position
Unknown
AA seq
669 aa
AA seq
DB search
MKGLGTKKDPKCAAKMESDSGTGEPRHCLRIITSVTPFVFSAVSVAFCILLGVQMNDIKI
RVIDLETANSERLLHPSPAFSRDQFNSLIQKRVEEVLSQRSYENLARIRTARQVSPDCNC
PPGPPGKRGRRGRNGDPGPPGPPGPKGDKGDQGDQGPRMVFPKINHGFLSADQQLIKRRL
IKGDQGQAGPPGPPGPPGPPGPRGPPGDTGKDGPRGAPGLPGDTGTPGELGPTGPEGPPG
TKGSIGPSGIPGIDGLKGEIGMPGLDGIPGAKGDKGDQGEKGDLGEEGQKGDPGEKGDAG
SSAAGIKGEPGEPGRSGQKGEPGLPGLPGLPGIKGEPGYLGPQGEPGLPGLPGTKGERGE
AGPPGKGERGEAGPAGPKGAQGDPGTPGLKGSKGDTGDKGDTGLTGPRGLSGEKGEQGTT
EIIDYNGNIQEALQKIAAITVTGPPGPPGPVGPQGIKGDPGLPGPPGLDGERGYKGSKGD
MGMPGISGEKGAVGLPGLPGVNGLKGEKGEAGPPGPQGPSIVGAPGSAGPHGPPGPMGPH
GFPGPKGEPGLHGLKGVRGEPGHKGDRGPLGLPGASGLDGKPGLMGMDGPVGASGPAGPK
GDRGEKGATGEPGPRGPYGLPGAAGTPGLDGFRGFKGEKGEPGQPGLDGLDAPCQLGPDG
LPMPGCWQK
NT seq
2010 nt
NT seq
+upstream
nt +downstream
nt
atgaaaggcttaggaacaaaaaaagacccgaagtgcgccgcgaaaatggagagcgactcc
gggactggcgagccgcggcattgccttagaatcatcacgagtgtgactccgtttgttttt
tccgctgtttccgtcgccttttgcatcctactgggcgttcaaatgaacgacattaaaatc
agagtgatagatttggaaactgcaaatagcgagcgccttttgcacccgtcccctgcgttt
tcacgggatcagtttaattcactgatacagaaaagagtggaggaggtgttgtcacagcgc
tcctacgaaaatcttgctaggataaggactgcccgtcaggtctcacctgactgcaactgc
ccaccaggtcctccagggaaacgtggaagaagaggacgcaatggagaccctggacctcct
ggcccacctggtccgaaaggcgacaagggcgatcaaggcgaccaggggccgaggatggtc
ttccctaagatcaatcatggctttctttctgctgaccagcagctcattaagcgccggctc
attaagggtgatcagggtcaagcgggacccccaggacctcctgggcctccaggtccccct
ggccccagggggcccccaggggacacagggaaggatggacccaggggagctccaggccta
ccgggtgataccggaacccccggagagctcggtcctacgggacctgagggccctccagga
accaagggttccatagggccatctggcatcccaggtatcgatggattaaagggcgagatt
ggtatgccgggattagatggaatccctggcgccaagggtgacaaaggggatcaaggtgaa
aagggcgacctgggagaggagggccagaagggagacccaggcgagaagggcgatgcagga
tcttctgctgctggtataaagggtgaaccgggtgagccagggcgaagtgggcaaaaggga
gagccaggacttccagggctacctggacttcccggaataaagggtgagcctggatacctt
gggcctcagggtgagccaggcctaccaggacttccaggaaccaagggagagcgaggagag
gcaggcccaccagggaagggggagcgtggagaggctggaccggctgggcccaagggggct
cagggggatccaggaacaccaggcctcaaagggtcaaagggggatactggagacaaaggg
gacacaggcctcacaggaccaagaggcttgtctggagagaaaggtgaacagggcacaact
gaaatcatcgactacaacggcaacatccaagaagcactccagaagatagctgctattaca
gtgacggggcctccagggcccccgggaccggttgggcctcagggcatcaagggggatcca
ggtcttccaggccccccaggacttgatggagagaggggttacaagggttcgaaaggggac
atgggaatgccaggaatatccggagaaaaaggagcagtcggactgccaggactgccaggt
gtgaatgggctgaaaggagagaagggtgaggctggtccacccggacctcaaggaccctct
attgtaggtgcacccggatcagctggaccgcacgggccccctggtccaatgggcccacat
ggattccctggacccaagggggaaccaggtttgcacggcttgaagggagtgcgaggagag
cctggccataagggtgaccgaggacccctgggcctccctggagcgtctggcttggacggc
aagccgggattaatgggtatggatggcccagtcggtgcttctggccctgctggtccaaaa
ggagacagaggtgagaaaggtgcaacaggagagcctgggccaagaggaccttatggatta
cctggtgctgctggaacccctggcctggatggtttccggggctttaagggtgaaaagggc
gagccaggccagcctggtctggatgggctggatgccccgtgccagttgggcccagatgga
ctacccatgcctggctgctggcaaaagtga
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