Electrophorus electricus (electric eel): 113577855
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Entry
113577855 CDS
T05787
Symbol
dhx38
Name
(RefSeq) pre-mRNA-splicing factor ATP-dependent RNA helicase PRP16 isoform X1
KO
K12815
pre-mRNA-splicing factor ATP-dependent RNA helicase DHX38/PRP16 [EC:
5.6.2.6
]
Organism
eee
Electrophorus electricus (electric eel)
Pathway
eee03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
eee00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
113577855 (dhx38)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
eee03041
]
113577855 (dhx38)
Enzymes [BR:
eee01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
113577855 (dhx38)
Spliceosome [BR:
eee03041
]
Complex C
Other components
Step II factors
113577855 (dhx38)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
OB_NTP_bind
HA2_C
Helicase_C
DEAD
WHD_HA2
AAA_22
AAA_19
T2SSE
nSTAND3
nSTAND_NTPase5
Flavi_DEAD
ResIII
Toxin_trans_Wo
Sigma54_activ_2
AAA_16
AAA_30
ATPase
PhoH
AAA_7
Motif
Other DBs
NCBI-GeneID:
113577855
NCBI-ProteinID:
XP_026866548
UniProt:
A0A4W4FW53
LinkDB
All DBs
Position
Unknown
AA seq
1251 aa
AA seq
DB search
MEDPSLHRLEGSDPGAQVGGLIVKKKSAVEEQHVFRAPAPRTSLLGLDLLAAQKRKEREG
KETLNSDSDDWRSKKSKVSSYKDWEEGKSDSGSDDDDDDDDEGGEGKNGRKESRKYRTTG
SETPSNPGGVSEEFRRKHQQRERDRREHGVYASSKEDKNRDNNREKGRDRDRDRKSDRDD
RDRSRSRSSGGSXSERSQRDGWSERISRGSRRDEPETPRNRPRDALTPSRSSWDEDDSGY
ASSRRSHWESPSPAPSHRESDRSERSQRSVRDSERRDKSVRARYPDDTPLPTPSYKYNEW
ANDRKHLGSTPRLSRGKGKKEGGEDGIAFDTEEEKEQWEEDQRQADRDWYMMDEGYDEFH
NPLTSSSDDYVKKREQILQKQTQKRISAQRRQINEDNERWETNRMLTSGVVQRLEVDEDF
EEDNAAKVHLLVHNLVPPFLDGRIVFTKQPEPVIPVKDPTSDMAIISRKGSQLVRKHREQ
KERKKAQHKHWELAGTKLGDIMGIKKEEDGSDSKVVREDGTVDYRTEQKFADHMREKTEA
SSEFAKKKSLLEQRQYLPIFAVRQQLLNIIRDNSIVIVVGETGSGKTTQLTQYLHEDGYT
RYGMVGCTQPRRVAAMSVAKRVSEEMGSNLGEEVGYAIRFEDCTSEKTVIKYMTDGILLR
ESLRESDLDHYSAIIMDEAHERSLNTDVLFGLLREVVSRRSDLKLIVTSATMDSDKFAAF
FGNVPIFHIPGRTFPVDILFSKTPQEDYVEAAVKQALQIHLSGMVGDILIFMPGQEDIEV
TSDQIVERLEELENAPALAVLPIYSQLPSDLQAKIFQKAPDGVRKCIVATNIAETSLTVD
GIMFVVDSGYCKLKVFNPRIGMDALQVYPISQANANQRAGRAGRTGPGHCYRLYTQSAFK
NEMLTTTIPEIQRTNLANVVLLLKSLGVQDLLLFHFMDPPPEDNMLNSMYQLWILGALDN
TGALTPTGRLMVEFPLDPALSKMLIVSCDMGCSSDILIIVSMLSVPTIFYRPKGREEESD
QVREKFAVPESDHLTYLNVYLQWKNNNYSSIWCNEHFIHTKAMRKVREVRAQLKDIMVQQ
KMSLMSSGSDWDVIRKCICAAYFHQAAKLKGIGEYVNVRTGMPCHLHPTSSLFGMGYTPD
YITYHELVMTTKEYMQCVTAVEGEWLAELGPMFYSIKHAGKSRQENRRRAKEEISIMEEE
MSLAEQQIRARREEQERKSSLGSTRSTKICTPGRREDVPMTPKRTPARFGL
NT seq
3756 nt
NT seq
+upstream
nt +downstream
nt
atggaagacccctccctgcatcggttagagggcagtgaccctggggctcaggtgggaggg
ctgattgtaaagaagaagagtgcggtggaggagcaacatgtgttccgagccccggccccg
cgcacttctctcctcggcctggatctgctggccgctcagaagcgcaaggaacgggagggg
aaggagacgctgaactctgattccgacgactggaggtcaaaaaagtccaaggtgtcttct
tacaaagactgggaggaaggaaaaagtgactctgggtctgatgatgacgatgatgatgat
gatgagggtggtgaaggcaagaatgggagaaaagagagcaggaagtaccgtacgacaggt
tccgaaactccctctaaccctggaggggttagtgaagagttccgccgaaaacaccagcaa
agggaacgagaccgtcgggagcatggggtctatgcctcgtccaaagaggacaaaaacagg
gacaacaacagggaaaaaggcagagaccgagacagagatcgaaagagcgatagagacgac
cgagaccggagtcgcagccgtagctctggcggcagccngagcgagcgctcgcagagggac
ggctggtctgagcgcatcagccgcgggagccgaagagacgaacccgaaacaccccggaat
cggcccagagatgccctgactccgtctcgctccagctgggatgaagacgacagcggctat
gctagctcccgccgctcccactgggagagtccgtctcccgccccttcacaccgggaatcc
gaccgctctgaacgcagccagcgctcggttcgggacagcgagaggagggacaagtcagta
agggcacgttatccagatgacactcctctgcccacaccctcatataaatataacgaatgg
gccaatgacaggaaacatctaggctccacccctcgtctctcccgaggaaaaggtaaaaag
gaaggtggagaagatggcattgcgtttgatactgaagaggagaaggaacagtgggaggaa
gatcagaggcaagcagacagagactggtacatgatggatgaaggctatgacgagttccac
aaccctctgacctccagctcggatgactacgtgaagaagagagaacagatcttgcagaag
cagacccagaaacgcatctctgcccagagacggcagatcaacgaggacaacgaacgctgg
gagaccaaccgcatgctgactagcggggtggtgcagagactagaagtagatgaggacttt
gaggaagacaacgcggccaaagtgcacctgcttgtccacaaccttgtcccccctttcctc
gacggcaggatcgtcttcaccaagcagccggagcctgtcattcccgtgaaagatccgact
tcggacatggccatcatctcccgcaagggcagccagctggtccggaagcacagggagcag
aaggaacgcaagaaggcgcaacataaacactgggagctggccggcaccaagctgggggac
ataatgggcatcaagaaagaggaagatggatctgactcgaaagtcgtcagagaggatggg
actgtggactacaggacggagcagaagtttgctgaccacatgagggagaagactgaggcc
agcagtgagttcgctaagaagaagtccctgctggagcagaggcagtatttgcccatcttc
gctgtccgccagcagctgctaaacatcatcagggacaacagcatcgtgatcgtggtgggc
gagacaggcagcgggaagaccacgcagctgacgcagtacctgcacgaagatggatacact
cgctacggcatggtgggctgcacgcagccgcgcagggtggccgccatgagcgtggccaag
agggttagcgaggagatgggcagcaacttgggggaggaggtgggttacgccatccgtttt
gaggactgtacctcggagaagacggtgatcaagtacatgacggacggaatccttctgcga
gagtccctgcgcgagtctgacctggaccactacagcgccatcatcatggacgaggcgcac
gaacgctccctcaacacagacgtgctcttcggcctgctccgtgaggtggtgtctagacgc
tcagatctgaagctcatcgtcacgtctgccaccatggactcggacaaatttgcggcattc
tttggaaatgttcccattttccacattcccgggagaacattcccagtggacatcttgttc
agtaagactcctcaggaggactacgtggaggcggctgtaaagcaggccttgcagattcac
ctgagtgggatggtgggagacattctcatcttcatgcctggtcaggaggacatcgaggtg
acgtcggatcagattgtggagcgtctggaggagctcgagaatgcccctgctctggcggtg
ctgcccatttactcccagctgccgtcagacctgcaggccaagatcttccagaaggcccca
gatggagttaggaagtgcattgttgccaccaacatcgccgagacttcactgactgtagat
ggcatcatgtttgtcgtggactctggatattgcaaactgaaggtgttcaacccccgtatt
ggtatggacgctctgcaggtttatcccatcagccaggccaatgcaaaccagcgtgcaggt
cgagctgggaggactggaccaggccactgctacagattgtacactcagagtgcctttaaa
aatgagatgttgaccaccaccatccctgagatccagcgcaccaacctggctaatgtggtg
ctactgctgaagtccctcggcgtgcaggaccttcttctcttccacttcatggatccaccc
cccgaggacaacatgctcaactccatgtaccagctgtggatcctgggcgccctcgacaac
acaggtgccctgacgcccacaggcaggctcatggtggagtttcccctggacccggccctg
tccaagatgctcattgtgtcctgtgacatgggctgcagctccgacatcctcatcatcgtc
tccatgctgtctgtgccgaccattttctaccggccgaagggccgggaggaggagagcgac
caggtgagggagaagtttgccgtgcccgagagcgatcacctgacctacctcaacgtctac
ctgcagtggaagaacaacaactactccagcatttggtgtaacgagcacttcatccacacc
aaggccatgcgcaaggtgcgtgaggtgcgtgctcagctcaaagacatcatggtacagcag
aagatgagtctgatgtccagcggctccgattgggacgtgatccggaagtgcatctgtgcc
gcctacttccaccaggccgctaagctgaagggcataggagagtacgtgaatgtacggaca
ggcatgccctgtcacctccatcccaccagttctctctttggaatgggctacacacctgac
tacatcacctaccacgagctggtgatgaccaccaaggagtacatgcagtgtgtgacggcg
gtggaaggggagtggctagctgagctgggtcccatgttctacagcatcaaacacgccggg
aagagcagacaggagaaccgccgcagggccaaagaggagatctccattatggaggaggag
atgtcactggcggagcagcagatacgtgcacgcagagaggagcaggagaggaagagctca
ctaggcagcaccaggtcgacaaagatctgcacccccggccgcagggaggatgtgcccatg
accccgaagcgcacacccgcgcgcttcggcctgtag
DBGET
integrated database retrieval system
