Electrophorus electricus (electric eel): 113578230
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Entry
113578230 CDS
T05787
Symbol
tnr
Name
(RefSeq) tenascin-R
KO
K06252
tenascin
Organism
eee
Electrophorus electricus (electric eel)
Pathway
eee04510
Focal adhesion
eee04512
ECM-receptor interaction
Brite
KEGG Orthology (KO) [BR:
eee00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
113578230 (tnr)
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
113578230 (tnr)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
00536 Glycosaminoglycan binding proteins [BR:
eee00536
]
113578230 (tnr)
Glycosaminoglycan binding proteins [BR:
eee00536
]
Heparan sulfate / Heparin
Extracellular matrix molecules
113578230 (tnr)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
fn3
Fibrinogen_C
EGF_TEN
EGF_Teneurin
Ig_DSCAM-DSCAML_C
Pur_ac_phosph_N
Fn3_Dep-1_2nd
EGF_Tenascin
FN3_Tor_3rd
EGF_2
DUF3515
Motif
Other DBs
NCBI-GeneID:
113578230
NCBI-ProteinID:
XP_026867168
LinkDB
All DBs
Position
Unknown
AA seq
1348 aa
AA seq
DB search
MCMRTMLPEASLLGLTLLFLTVPATPSPDGKLVRTARVRRQTSDGGGLPGNQSQPMVFNH
VYNINVPLEALCSVDLDANTGPEPKGPAWADKAPAEHAEQPMDSESQITFTHHINIPMQT
CGCPASVALLQLVSRIETLEREVSLLRVRCGGDESASLGHPEPDSQCGRHGTFSVDICGC
VCEEGWTGKNCSELRCPDDCSGQGVCVEGECMCDRDFGGENCSEARCPGDCSERGLCIDG
ECVCEEAFEGEDCSMGRCLNDCSHQGVCLNGTCHCRSGFLGEDCSRIFCANNCSQKGDCR
AGFCLCQDGYAGDDCAAVASPMNLRVRGVTEHTIEVEWEGSSVVTDYLITYIPTSPGGVQ
MELRVQGSVTNSSIGDLEAGLEYNINVYAVITDVISVPASILVSTYLSNPDGLSFKSITE
TSVEVQWQAFDHVFDGWEVSFIPKDNDGGMTAQLPSTIRSFHQTGLRPGEEYTVSLVALK
DQGRSQPLTTTITTLIDGPAQLVVRDVSDTVAFVEWTPPRAKVDQIVLRYGLAGTDEPRT
TFRLQPTLSQYSLQVLRPGARYDVSVSGVRGGNESDAISAQFTTEIDAPKDPRVVSKTST
SLELDWENSEADVEGYQVVYSTLAGDQYDRVEVPRGSGGTTRITLTDLLPGTEYGIGISA
HLGAKQSTPATMNARTGLDVPMDLTVTASTDNTISLLWGKVQGPIDHYRVTYTSASGVSI
ELTVPRDISSTTLRELEPATEYTITVTAQRGRQQSSAATIDAFTGLRPVSQLYFSDVTAA
SLAVSWSAPAPPADRFDLYYGTHESSVESVVILDGSRTKAILSGLLPSRQYVITLVTMHG
DTASEPVTGTVLTGMDAPREMAVSYITEDSVTVSWLPPLSPFEYYKMSHRSARGRVDSVV
IDKDVTNYTLTNLHPATEYDITLNAARGSRESQPVSAVVFTAMDMPMELTALNVTPQGAL
LRWVSPLSSVDNYVLTVTRNQVTADTFLVEGTKQNHELSHLLPSTAYSASLYATKGPLTS
GTIVTTFLTPMDAPQNLTASEVNHRSALISWQPPIADIDNYMLTYRSPDSSRKELILDAE
DTWIRLEGLAETTMYTVRLQAARGLETSAIVSTAFTTRQRLFSMPQNCAQHLLNGELLSS
VYTIYINRDPSQGMQVYCDMLTDGGGWIVFQRRQNGLTDFSRKWSDYRTGFGNLEDEFWL
GLDNIQKITAQGRYELRIDMRDGQESVYATYDRFSIGDAKSFYKLRIGEYNGTAGDSLSY
HQGRPFSTKDRDNDIAVTNCALSYKGAWWYKNCHRANLNGKYGESRHSQGINWHKWKGHE
FSIPFVEMKTRPFNYRSVVSKRRRHVLR
NT seq
4047 nt
NT seq
+upstream
nt +downstream
nt
atgtgcatgcgcaccatgttgccggaggcttctctgctcggcctgactctgctatttctc
actgtccctgccacaccgagccctgacggcaaactcgtccgcaccgcaagggtcaggcgg
caaacgtccgacggcggcggtctccctggcaaccagagccaacccatggtcttcaaccac
gtgtataacatcaacgtccccctggaagccctgtgctccgtggacctagacgccaacacg
gggcctgaaccaaagggcccggcctgggcggacaaggccccggcagagcacgcggagcag
ccgatggactcggagagccagatcaccttcacccaccacatcaacatccccatgcagaca
tgcgggtgccccgcctcagtcgcactgctgcagctggtcagcagaatcgagacgctggag
agggaggtatctctgctccgcgtccggtgtggcggcgacgagagcgcctctctaggtcac
ccggagcccgattcccagtgcggccgtcatggcaccttcagcgtcgacatctgcggctgc
gtgtgcgaggagggctggacaggaaagaactgctcggagctgcgttgcccggatgactgc
tccggacagggcgtgtgcgtggagggcgagtgcatgtgcgaccgggacttcggaggcgag
aactgctcggaggcgcgttgccccggcgactgctcggagcgcggcctttgcattgacggc
gagtgtgtgtgcgaggaggccttcgagggggaggactgctccatggggaggtgtctgaac
gactgttctcaccagggcgtctgcctcaacggcacgtgccactgccgctcggggttcctg
ggagaagattgctcccgcatcttctgcgccaacaactgcagccaaaagggcgattgcagg
gccggattctgcttgtgccaggacggctatgcgggggacgactgcgcagcagtggcatca
cctatgaatctgcgggttcgaggagtgacggaacataccatcgaagtggagtgggagggg
tcatcggttgtaacggactacctgatcacttacattcccacgagccctggtggtgtccag
atggagttacgggttcaaggaagcgtgaccaatagcagcatcggggatctggaggcgggt
ctggagtacaacatcaacgtttacgccgtgattaccgacgtgatcagtgtcccagcgagt
atcctcgtctccacctatctctcgaatccagatggtttgtcctttaaatccatcacggag
acgtcggtggaggtccagtggcaggccttcgaccacgtgtttgacggctgggaagtgagc
ttcatccccaaggacaacgatggagggatgacagctcagcttccgagcactatccggtcc
tttcaccagacgggtctgagacccggggaggagtacacagtcagcctggtggcactgaag
gatcagggccgtagtcagccactcaccaccaccatcaccacactaattgacgggccagcg
cagctggtggtccgcgacgtgtcagacacggtggcgttcgtggaatggacgccgccgcgc
gccaaggtggaccagatcgtcctgcgttacgggttagcgggcacggatgagcccaggacc
acgttccgcctgcagcccacgctgagtcagtattcactgcaggtgctgcggcccggagcc
aggtacgacgtgtccgtcagcggggtccgcgggggtaacgaaagtgatgccatttccgca
cagtttaccacagagattgacgcccccaaagacccgcgggtggtgtcaaagacgtccacc
tcactggagctggactgggagaacagtgaggcagatgtggagggttaccaggtggtgtac
agcacgctggctggagaccaatacgacagagtggaggtcccacgtggcagtgggggcacc
acccgtatcacgctcacggatctgctgcctggtaccgaatatggcattggaatctcggcc
catcttggtgccaaacaaagcacccctgccacaatgaacgccaggactggtctggatgtc
cccatggacctgacagtcaccgcatctacggacaacaccatctccttgctgtggggcaag
gtccagggacccatcgaccactacagggtaacctacacctcagccagtggggtgagcatt
gagctgacggtgcccagagatatcagcagcaccaccctgagggagctggagccagccacc
gagtataccatcacagtcacagcccagcgggggcggcagcaaagctcagctgccaccatt
gatgccttcacagggctccgccccgtgagccagctctacttctcggacgtgacggctgcc
tcgctggccgtcagctggagcgctcctgcaccacctgccgaccgcttcgacttgtactac
ggtacccatgagtccagtgtcgagtccgtggtcattctcgatggatccagaaccaaagcc
atcctgtcaggcctgcttccttcgaggcagtatgtaatcaccctagtaaccatgcacgga
gacactgcctcagagccagtcaccggcacggtcctcacagggatggacgctcccagagag
atggccgtgtcgtacatcaccgaggattcggtaaccgtgtcttggcttccccctttatcc
cccttcgagtactacaaaatgtcccaccgctctgccagaggtcgagtggacagtgtggtg
atcgataaagacgtgacgaactacaccctgaccaaccttcaccctgccacagagtacgac
atcacgctgaacgccgcgcgggggagcagagagagtcagccagtcagcgccgtcgtattc
acagccatggacatgcccatggagcttacggcactgaacgtcaccccgcagggggcgctg
ttgagatgggtctcgccgctctccagcgtggataactacgtcctcaccgtcacccgcaac
caggtgacagccgacaccttcctggtggaggggactaaacagaatcatgagctgagccac
ctgctccccagcacggcctactccgccagcttgtacgccaccaagggtcccctgaccagc
ggcaccatcgtcactacgttcctcacgcccatggatgcaccgcagaacctgacagccagc
gaggtcaaccatcgcagcgccctcatttcatggcaaccgcccattgcagacatcgataac
tacatgctgacctacaggtcacccgacagcagccgtaaggagctcatcctggatgctgaa
gacacctggatccgtctggagggcctcgctgagacaaccatgtacactgtgcgactgcag
gccgccagaggactggagaccagtgccatcgtctccaccgccttcactaccaggcagcgg
ctattctccatgccacagaactgcgcgcagcacctgctcaacggcgagcttctcagtagc
gtctacaccatctacatcaatcgcgaccccagccagggcatgcaggtgtactgcgacatg
ctcacggacggcggtggatggatcgtgttccagcgtcggcagaacggcctgacggatttc
tccaggaagtggagcgactacaggaccggctttgggaatttggaggatgaattctggcta
ggtttggacaacattcagaagatcacagcccagggccgctacgagctccgcatcgacatg
agagatggccaggagtccgtctacgcgacctatgacagattctccatcggagacgctaaa
agcttctacaaactgaggataggagagtacaatggtaccgcaggcgactctctgagttac
caccagggtcggcccttctccaccaaagacagggacaacgacatcgccgtgactaactgc
gccctctcctacaaaggagcttggtggtataagaactgccacagagctaacctcaatggg
aaatatggcgagtccagacacagccagggtatcaactggcataaatggaaaggtcatgag
ttctccatcccgttcgtggagatgaagacgaggccctttaattatcgcagcgtcgtcagc
aagcgaaggaggcacgttctccgttaa
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