Electrophorus electricus (electric eel): 113578360
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Entry
113578360 CDS
T05787
Name
(RefSeq) probable ATP-dependent RNA helicase ddx6 isoform X1
KO
K12614
ATP-dependent RNA helicase DDX6/DHH1 [EC:
5.6.2.7
]
Organism
eee
Electrophorus electricus (electric eel)
Pathway
eee03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
eee00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
113578360
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
eee03019
]
113578360
03036 Chromosome and associated proteins [BR:
eee03036
]
113578360
Enzymes [BR:
eee01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
113578360
Messenger RNA biogenesis [BR:
eee03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
Common to processing body (P body) and stress granule
113578360
mRNA degradation factors
5'-3' decay
Decapping complex
113578360
Chromosome and associated proteins [BR:
eee03036
]
Eukaryotic type
Gene silencing
piRNA pathway
113578360
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DEAD
Helicase_C
CMS1
NA-iREase2
Motif
Other DBs
NCBI-GeneID:
113578360
NCBI-ProteinID:
XP_026867354
UniProt:
A0A4W4ENI5
LinkDB
All DBs
Position
Unknown
AA seq
495 aa
AA seq
DB search
MATARMESVGPVIMGISKQNGQFRGHTKPSSQTGPTGESSQPGKIPAVAQNPAGGSQEGP
GIRFGDDWKKRLQLPPKDNRIKTSDVTATKGNEFEDYCLKRELLMGIFEMGWEKPSPIQE
ESIPIALSGRDILARAKNGTGKSGAYLIPMLERIDLKKDHIQAIVMVPTRELALQVSQIT
IQLSKHLGGVKVMATTGGTNLRDDIMRLDETVHVVIATPGRILDLIKKGVAKVDKVQMMI
MDEADKLLSQDFVVLIEDIISFLAKNRQILLYSATFPISVQKFMVKHLQKPYEINLMEEL
TLKGITQFYAYVTERQKVHCLNTLFSRLQINQSIIFCNSTQRVELLAKKITQLGYSCFYI
HAKMMQEYRNRVFHDFRNGLCRNLVCTDLFTRGIDIQAVNVVINFDFPKNAETYLHRIGR
SGRFGHLGLAINLITAEDRFNLKVVEDQLVTEIKPIPGNIDKSLYVAEFHSASLNSEAET
QEQETLPLAVKPQAL
NT seq
1488 nt
NT seq
+upstream
nt +downstream
nt
atggctactgcaaggatggagagtgtaggccctgtgataatggggatcagcaagcagaat
ggccagtttagaggacataccaagccatcctctcaaactggacccacaggtgagagtagt
cagcctggaaagattcctgctgtagcccaaaaccctgctgggggctctcaagaaggacct
ggaatcaggtttggtgatgactggaaaaaaagacttcagctcccacccaaagacaacaga
atcaaaacatcagatgtaacagccaccaaggggaatgagtttgaggactactgcttgaag
agggagctattgatgggcatctttgaaatgggctgggagaaaccttcccccattcaggaa
gagagtatacccattgcactgtctggtcgtgacatcctggctcgtgccaaaaacgggaca
ggaaagagtggggcatacctgatacccatgttggagaggatcgacctaaagaaagaccac
atccaggccatagtgatggtgcccacccgtgagcttgccctgcaggtcagccagatcacc
atccagcttagtaagcatctgggtggagtcaaagtcatggcaaccacaggggggaccaac
ctacgggatgacatcatgcgtctggatgagacagtgcatgttgtcatagctacaccaggg
aggattctggacttaatcaagaagggagtagccaaagtggacaaagttcaaatgatgata
atggatgaggctgataagctgctgtctcaggattttgtggtgctaattgaggacattatt
agcttcctggccaagaacaggcagattttgctctattctgctacctttccaatcagcgta
caaaaatttatggtgaaacacctgcagaagccctatgagattaacctgatggaggaatta
accctgaagggcatcacacagttctatgcttatgtcactgagaggcaaaaagtgcactgc
ctcaatacactcttctcaaggctgcagatcaatcagtccattatcttctgcaactccact
cagagagtggaactccttgccaagaagataacccaactgggctactcttgtttctacatt
catgccaaaatgatgcaggagtatcgaaaccgtgttttccatgacttcagaaatggactg
tgcagaaatctggtctgcacagatttattcacccgaggcatagacatccaggcagtaaat
gtggttatcaactttgactttcccaagaatgcagagacctatctgcatcgtattggacgc
tcagggaggtttggtcacctgggtctggccattaacctgatcacagcagaggatcgcttt
aacctgaaggtcgttgaggatcagctggtgactgaaattaaacccatccctggcaacatt
gacaaaagcctatatgtagcggagttccactcagccagcctcaactctgaggcagagaca
caggaacaggagaccctgccccttgcagtgaagcctcaagccctctaa
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