KEGG   Electrophorus electricus (electric eel): 113578669
Entry
113578669         CDS       T05787                                 
Symbol
rfc4
Name
(RefSeq) replication factor C subunit 4
  KO
K10755  replication factor C subunit 2/4
Organism
eee  Electrophorus electricus (electric eel)
Pathway
eee03030  DNA replication
eee03410  Base excision repair
eee03420  Nucleotide excision repair
eee03430  Mismatch repair
Brite
KEGG Orthology (KO) [BR:eee00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    113578669 (rfc4)
   03410 Base excision repair
    113578669 (rfc4)
   03420 Nucleotide excision repair
    113578669 (rfc4)
   03430 Mismatch repair
    113578669 (rfc4)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:eee03032]
    113578669 (rfc4)
   03036 Chromosome and associated proteins [BR:eee03036]
    113578669 (rfc4)
   03400 DNA repair and recombination proteins [BR:eee03400]
    113578669 (rfc4)
DNA replication proteins [BR:eee03032]
 Eukaryotic type
  DNA Replication Elongation Factors
   RFC (replication factor C)
    113578669 (rfc4)
  DNA Replication Termination Factors
   ELG1-RFC complex
    113578669 (rfc4)
Chromosome and associated proteins [BR:eee03036]
 Eukaryotic type
  Sister chromatid cohesion proteins
   CTF18-RFC complex
    113578669 (rfc4)
DNA repair and recombination proteins [BR:eee03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   MMR (mismatch excision repair)
    RFC (replication factor C)
     113578669 (rfc4)
  Check point factors
   HRAD17(Rad24)-RFC complex
    113578669 (rfc4)
SSDB
Motif
Pfam: Rep_fac_C AAA DNA_pol3_delta2 Rad17 AAA_assoc_2 AAA_22 AAA_16 AAA_11 DUF815 AAA_30 AAA_24 Mg_chelatase SLFN-g3_helicase AAA_14 AAA_28 AAA_19 RuvB_N Gp44_lid AAA_5 Kinesin ResIII DUF2096 AAA_7 bpMoxR Hydantoinase_B
Other DBs
NCBI-GeneID: 113578669
NCBI-ProteinID: XP_026867873
LinkDB
Position
Unknown
AA seq 357 aa
MQAFLKGSTQNVKPQRDKAAASTSGEKKQKPVPWVEKYRPKCVNEVAFQEEVVAVLKKSL
EGADLPNLLFYGPPGTGKTSTILAAARELYGPELYRQRVLELNASDERGIQVIREKVKNF
AQLTVAGTRPDGKACPPFKIIILDEADSMTNPAQAALRRTMEKESRTTRFCLICNYVSRI
IEPLTSRCSKFRFKPLANEVQQERLLEICEKESLKYTKEGIDALVKVSEGDLRKAITLLQ
SAARLSAEKEVTESIVTETAAVVPPKVIENLLQTCYKGTFEKLEIAVKNIIDEGYAATQV
LSQLHDIIIEERLSDKQKSAITEKMAVVDKCLVDGADEYLQLLGLCAVIMQQATQSN
NT seq 1074 nt   +upstreamnt  +downstreamnt
atgcaggcttttttgaaaggatctacacaaaatgtcaaaccccagagggacaaggcagca
gcttcgaccagtggagaaaagaaacagaaaccagtaccgtgggtagaaaaatacagaccg
aagtgtgtcaatgaagtggcttttcaggaggaggttgttgccgttttgaagaagtcacta
gagggcgctgatctacctaacttgctcttttatggcccacctggaacaggaaagacctcc
actattcttgctgcagcaagagagctttatgggccagagttgtaccgacaaagggtgctg
gagctgaatgcctctgatgaaagagggattcaggtgatccgtgagaaggtgaagaatttt
gctcagctgacggtggctggtacccgaccagacgggaaggcatgtcctccgtttaaaatt
ataatactggatgaggccgattcaatgaccaaccctgcccaggcagcactgaggcgcacc
atggagaaggaatcgcgcaccacccgcttctgtctcatatgcaactacgtcagcagaatc
atcgagcctttgacatcccggtgctcgaagtttcgcttcaaacccctcgctaacgaggtc
cagcaggagcggctgctagaaatatgtgagaaggagagcctcaaatacaccaaagagggg
atcgacgcgctggtgaaggtgtcggagggggatctccgaaaagccataacacttctccag
agtgcagcaaggctgagcgcagagaaagaggtcacggagagcatagtcacagaaactgca
gcggtggttccacctaaagtaattgaaaacctgctccaaacctgttacaaaggcaccttt
gaaaaactagagattgctgtgaagaacataatagatgaaggctatgctgccacacaggtt
ctcagccagctccacgatatcatcatagaggagcgcctcagcgacaaacagaagtctgct
atcacagagaagatggcggtagttgataagtgcttggtggacggtgctgatgagtacctg
cagctgctgggactatgtgctgttatcatgcaacaggctacgcagagcaactga

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