Electrophorus electricus (electric eel): 113579289
Help
Entry
113579289 CDS
T05787
Name
(RefSeq) transcription factor Sox-17-alpha-like
KO
K04495
transcription factor SOX17 (SOX group F)
Organism
eee
Electrophorus electricus (electric eel)
Pathway
eee04310
Wnt signaling pathway
Brite
KEGG Orthology (KO) [BR:
eee00001
]
09130 Environmental Information Processing
09132 Signal transduction
04310 Wnt signaling pathway
113579289
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
eee03000
]
113579289
Transcription factors [BR:
eee03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
HMG SOX
113579289
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
HMG_box
Sox17_18_mid
HMG_box_2
HMG_WDHD1
HTH_24
Motif
Other DBs
NCBI-GeneID:
113579289
NCBI-ProteinID:
XP_026868901
LinkDB
All DBs
Position
Unknown
AA seq
449 aa
AA seq
DB search
MSSPDAGYASDDTSQARGTSSVMMPGVGQCAWTDPLSPLADTKVKSDACAGGPGRGKSEP
RIRRPMNAFMVWAKDERKRLAQQNPDLHNAELSKMLGKSWKALSVVDKRPFVEEAERLRV
QHMQDHPNYKYRPRRRKQVKRIKRLDSGFLLPGTSEPQTPLGMESLGVGYSLPPTGMPQG
SLPQYCDAQGLFENYSLPTPDSSPMDELGTETTFFAVHPQEESSQGAYGYSQHQDYVPHG
HPQHIVNTHIHGGGQGEVHPHVTAHSHGGVHQGVNPHTLVSAHSHSNSQTNLMTSTHSQE
LGSTNVSAQMGHNINAPHNPLPSHPLSQVLFNRNLSAGSNQGPPPAYLPCQSTLGVFYNP
ASQVKHTVEDLSPPQESHTHPHTLAEQHSRTPTEAHRHGPEMLSEVDTNEFEQYLSYGIP
QAPMQGPDLISSVLSDASTAVYYCNYSNT
NT seq
1350 nt
NT seq
+upstream
nt +downstream
nt
atgagcagtcccgatgcgggctacgccagcgacgatacaagccaagctcgcggcaccagc
tcagtcatgatgcccggcgtgggccagtgcgcgtggacagacccgctgagtccgctcgca
gacaccaaagtgaagagcgacgcgtgcgctggcggtcctgggcgtgggaagagcgaaccg
cgcatccgcaggccaatgaatgcatttatggtttgggcaaaagatgagcgaaagagactt
gcacagcaaaatcctgacctgcacaacgctgaactcagcaaaatgctcggtaagtcgtgg
aaggcgctgtcagtggtggacaagcggccatttgtggaggaggccgagcggctgcgcgtg
cagcacatgcaggaccacccaaactacaagtacaggcctcggcgtcgtaagcaggtgaag
aggatcaagcgtctggactccggcttcctgctgcctgggacgtctgagccccagacccct
ctgggcatggagagtctgggggtgggctattccctgccccccaccggcatgccccagggg
agtctgccacagtactgtgatgcccagggtctctttgaaaactacagtctgcccacgcct
gactcctccccaatggacgagctggggacagagaccacatttttcgctgtccatcctcag
gaggagagttcccagggagcttatggctacagtcagcaccaagactacgtgccccatggg
caccctcaacatattgtcaacacacacattcatggcggtgggcagggagaggtgcatcct
cacgtcacagcacactcgcatggcggtgtgcaccaaggggtcaacccacacacactcgtt
agtgcacactcccacagcaacagccaaaccaatctgatgaccagcacacactctcaggaa
ctgggcagtacgaatgtcagtgcacagatgggccacaatatcaatgctccccacaatcct
cttccctcccatccactgtctcaggtactcttcaacagaaacctatcggctggctccaat
cagggcccaccccctgcctacctgccctgccagtccaccctaggcgtgttctataaccct
gcctctcaagtgaagcatacagttgaggatctatcacctccccaggagagtcatacacat
ccacatacccttgctgaacagcactcacgcactcctacagaagcacaccgccatggtcct
gagatgctgagtgaggttgacactaatgaatttgagcagtatctctcatatgggattcct
caggcacccatgcaggggcctgacctaatatcctctgtattgtcagatgctagcactgct
gtgtactactgtaactatagcaacacatga
DBGET
integrated database retrieval system
