KEGG   Electrophorus electricus (electric eel): 113579649
Entry
113579649         CDS       T05787                                 
Name
(RefSeq) LOW QUALITY PROTEIN: TAF5-like RNA polymerase II p300/CBP-associated factor-associated factor 65 kDa subunit 5L
  KO
K03130  transcription initiation factor TFIID subunit 5
Organism
eee  Electrophorus electricus (electric eel)
Pathway
eee03022  Basal transcription factors
Brite
KEGG Orthology (KO) [BR:eee00001]
 09120 Genetic Information Processing
  09121 Transcription
   03022 Basal transcription factors
    113579649
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:eee03021]
    113579649
   03036 Chromosome and associated proteins [BR:eee03036]
    113579649
Transcription machinery [BR:eee03021]
 Eukaryotic type
  RNA polymerase II system
   Basal transcription factors
    TFIID
     113579649
   Coactivators
    SAGA/TFTC/STAGA complex
     113579649
Chromosome and associated proteins [BR:eee03036]
 Eukaryotic type
  Histone modification proteins
   HAT complexes
    PCAF complex
     113579649
    STAGA complex
     113579649
    TFTC complex
     113579649
    SAGA complex
     113579649
    SLIK complex
     113579649
SSDB
Motif
Pfam: WD40 WD40_Prp19 Beta-prop_CAF1B_HIR1 WD40_WDHD1_1st WD40_CDC20-Fz Beta-prop_EML_2 TFIID_NTD2 Beta-prop_TEP1_2nd EIF3I Beta-prop_WDR90_POC16_2nd WD40_MABP1-WDR62_2nd Beta-prop_EML WDR55 Beta-prop_TEP1_C Beta-prop_SCAP WD40_MABP1-WDR62_1st Beta-prop_WDR75_1st ANAPC4_WD40 Beta-prop_IFT122_1st WDR90_beta-prop_4th Beta-prop_IFT140_1st Beta-prop_RIG_2nd Beta-prop_EIPR1 NBCH_WD40 Beta-prop_SPT8 Beta-prop_HPS5 Beta-prop_Vps41 Beta-prop_WDR19_1st PEP5_VPS11_N WD_LRWD1
Other DBs
NCBI-GeneID: 113579649
NCBI-ProteinID: XP_026869540
LinkDB
Position
Unknown
AA seq 519 aa
MKRGRAEQIQYAVAQYLKRRQYVDVESSLKGAKLTQSAEEMAASLTVQTESSCANVVSAA
PCHSDSQQYESQFSRLRTFLLEAEIPLGREVSAVLFPLFLYLHLDMVRCGLKGAVDAFYG
RFHSLFQQDGEQKAIVEQLRGVLTPQDVASNSKLCALLDHKYVVHLTDRAYSYLLRYLQS
EDNSALCRVLSTHLQVEVTAVRHTDYQLYGAGLVAGVDGAEGAESVEVPAGXXXXXXLPQ
SEAALEALQDCIKRVREGPPSLTTVCFYAFRDPEGLLNGAEVSPDSRLLAAAFDXLEEEA
DEEDSSGSETKTLRGHCGPVYRAAFLTDSSGLLSCSEDSTVRYWDLHTFTNAALFAGHAY
PVWDVCVCVCVXYFATASQDRTARLWTLSRAFPLRVYAGHLADVDCARFHPNSNYLATGS
TDKTVRLWSIQQGATARLFTGHRGPVHALAFSPNGRYLASAGEDQRVKLWDLASGGLLKD
LRGHAHSVTALSFSPDSSLVASAALDNSVRDLGEFKHEE
NT seq 1560 nt   +upstreamnt  +downstreamnt
atgaaacggggccgtgcggagcagatccagtacgcggtggcgcagtacctgaagcggcgc
cagtatgtggatgtagagagctcgctcaaaggggctaagctgacgcagtccgcagaggaa
atggccgccagtctcacggtccaaacagagtctagctgtgcaaacgtggtgtcagcagca
ccctgccattcagactctcagcagtatgagtctcagttctccaggttacgcacctttttg
ctggaggcggagataccgttgggccgggaggtgagcgcggtcctgtttcctctcttcctc
tacctgcatctggacatggtgcgctgtggcctgaagggggcagtagacgcgttctacggc
cgcttccactcgctctttcagcaggatggcgagcagaaggccatcgtcgagcagctccgt
ggagtgctcacaccgcaggatgtggcctcaaactccaaactgtgtgccctgctggaccac
aagtacgtggtccacctgacagaccgcgcctacagctacctcctacgctacctgcagagt
gaggacaacagcgccctctgcagggtgctcagcacacacctacaggtggaggtgacggcc
gtgcgccacaccgactaccagctctacggggcggggctcgtagcgggggtggacggggca
gagggggcggagtccgtggaggtcccggcagggnnnnnnnnnnnnnnnnnnctgccacag
agcgaggcggcgctggaggcgctgcaggattgcatcaagcgcgtgcgggagggcccgccc
tcgctgaccaccgtctgcttctacgccttccgggacccggaggggctcctgaacggcgcc
gaggtgtcgcccgacagccgcctcctcgccgccgcctttgacangctggaggaggaggcg
gatgaagaggacagctcggggagcgagacgaagaccctgcggggccactgtgggccagtg
taccgcgcggccttcctgacggacagctcgggcctgctgtcgtgctctgaggactcaacg
gtgcgctactgggacctgcacacgttcaccaacgcggcgctgttcgccggccacgcctac
cccgtgtgggatgtgtgtgtgtgtgtgtgtgtgtngtacttcgccacggcgtcacaggac
cgcacggcacgcctctggacgctctcgcgcgccttcccgctgcgcgtctacgccggccac
ctggccgacgtggactgcgcgcgcttccaccccaactccaactacctggcgacaggctcc
actgacaagactgtgcgcctgtggagcatccagcagggggcaacggcacgcctgttcacg
ggccaccgcgggcccgtgcatgccctggccttctcgcccaacggccggtacttggcatcg
gcgggcgaggaccagcgtgtcaagctgtgggacctggcgtcgggcggcctgctgaaggac
ctccgcggccacgcccactccgtcacggccctgtcgttcagcccggacagctcgctggtg
gcgtctgccgccctggacaactccgtgcgggatctaggcgagtttaaacatgaagaataa

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