Electrophorus electricus (electric eel): 113579732
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Entry
113579732 CDS
T05787
Name
(RefSeq) CCR4-NOT transcription complex subunit 4-like
KO
K10643
CCR4-NOT transcription complex subunit 4 [EC:
2.3.2.27
]
Organism
eee
Electrophorus electricus (electric eel)
Pathway
eee03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
eee00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
113579732
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
eee03000
]
113579732
03019 Messenger RNA biogenesis [BR:
eee03019
]
113579732
04121 Ubiquitin system [BR:
eee04121
]
113579732
Enzymes [BR:
eee01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
113579732
Transcription factors [BR:
eee03000
]
Eukaryotic type
Zinc finger
Cys3His zinc factors
113579732
Messenger RNA biogenesis [BR:
eee03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
113579732
mRNA degradation factors
3'-5' decay
Ccr4-NOT complex
113579732
Ubiquitin system [BR:
eee04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
113579732
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
zf-RING_4
RRM_1
DZR_2
zf-CCCH_2
Med7
zf-C3HC4_3
Nup35_RRM_2
zf-UDP
Torus
Motif
Other DBs
NCBI-GeneID:
113579732
NCBI-ProteinID:
XP_026869672
LinkDB
All DBs
Position
Unknown
AA seq
741 aa
AA seq
DB search
GYQICRFCWHRIRTDENGLCPACRKPYPEDPAVYKPLSQEEIQRIKSEKKQKQNERKQKV
TENRKHLASVRVVQRNLVFVVGLSQRLADPEVLKRPEYFGKFGKIHKVVINNSTSYAGSQ
GPSASAYVTYIRSEDALRAIQCVNNVVVDGRTLKASLGTTKYCSYFLKSMQCPKPDCMYL
HELGDEAASFTKEEMQAGKHQEYEQKLLQDLYKLNPNFLQTSTCGGEKSKGKSNATQRQN
STSKENWPLLQSYGKLVNGLPTEHRKSPPLLDCLTDSDHMTPDEVDPELSTDQSPGLPAF
PSALEPASPVEKPTEPVSIGNGENTQQVPSSDSPSPPPGLSKPSLVVPISMADLTARSPF
EGAAAESQSLFSDNSNFRHPNPLPSGLPSFPSSPQGGSEWPMTPEPHSLFASDTIPVASS
TDWQAAFGFGSSAKQQQQDDDLGFDPFDVTRKALADLIEKELSVQEAPPCSPTLPPHTAA
IPNGQPRGPQPLHRGLFGSFSLAPHITSRHPWMGLPTRNNLTHVSHMASTALTHSHFLDA
SGPHQHHSTGLGGIPISESSSSAESINVKEWQDGLRALLPNININFGGLPSSTSSSSSSS
TSSVNHIGVSAGSAGVSHSLSWDGTASWMDPAIITGVPASAGSSLDCLQDDSPPHWLKSL
QALTEADGPGGSGAAPQAQHTGLLDAAAQLSLHRAGWAPYLPPPTLTPSQFHSPPPGFQT
AFRPPAQTATDLLQSAGMDRH
NT seq
2226 nt
NT seq
+upstream
nt +downstream
nt
ggctaccagatctgccgcttctgctggcatcgaattcgcacggatgagaacggcctgtgc
ccagcgtgccgaaagccgtaccccgaggacccggccgtgtacaagcccctctcacaggag
gagatccagaggataaagagcgagaaaaagcagaagcagaatgagaggaagcagaaggtg
acagagaaccgcaaacacctggccagtgtacgtgtcgtgcagcgcaacctggtgtttgtt
gtgggactctcacagagactcgctgaccccgaggttcttaaacggccagaatattttgga
aagtttggcaaaatacataaagttgtcatcaacaacagtacatcatatgcaggctcacag
ggtcctagtgccagtgcctatgttacttacatccgctcagaggatgccctaagagcaata
cagtgtgttaacaatgtggtagtcgatggtagaacacttaaggcttctttaggtacaaca
aaatactgcagttattttctgaaaagcatgcagtgccccaagccagactgtatgtattta
catgaactgggagatgaggcagctagttttactaaagaggaaatgcaggctgggaaacac
caagaatatgaacaaaaactcctgcaagatctttacaaactgaatcccaactttctacaa
acatcaacatgtggaggggagaagtcaaaaggcaaatcaaatgctacacaaagacagaat
agtaccagtaaagagaattggcccttgctacagagctatggcaaattagttaacggttta
cctacagaacatcgcaagtccccaccacttttagactgcctgacagattcagatcacatg
actccagatgaagtagaccccgagctcagcacggaccagagcccaggcctcccagcattc
ccctcggccctagagcctgccagtcctgttgaaaaaccaacggaacctgtaagtataggg
aacggagagaacacacaacaggttccgagcagtgactcaccctcaccgcctcctgggcta
tcaaagcccagtctggtggtgcccatcagcatggcagacctcacagcacgttcccccttc
gagggagcagctgccgagtcacagtctctgttctcagacaacagcaacttcaggcacccc
aaccccctccccagtggactgccctccttccccagctcaccgcagggcggctcagagtgg
cccatgacccccgaaccccacagcctttttgcctcagacacaatccctgtcgcctcctcc
acggactggcaggctgcctttggttttggttcctcggccaaacagcagcagcaggatgac
gacctaggcttcgaccccttcgatgtaacccggaaggccctggccgacctcattgagaaa
gagctctctgtgcaggaggccccgccctgctcacccacactcccaccccacacagctgcc
atccccaacggacaaccacgcggcccccagccgttgcaccgcggcctctttggctccttc
agcctggcgccacacatcacctcacgccacccctggatgggcctgcccacccgcaacaat
ctcacgcacgtgagccacatggccagcacagcactcacgcacagccacttcttagacgca
agtggcccgcatcagcaccacagcacaggcctcggggggatacccatatcagaaagcagt
agctcagcagaaagcatcaacgtgaaagaatggcaggacggtctgagagctctcctgcca
aacatcaacatcaacttcggaggcctcccaagctctacctcctcttcctcctcctcctcc
acttccagcgtgaatcacattggggtgtcggcagggtcagcaggggtctcgcacagtctg
agctgggacggcacggcaagctggatggacccagccatcatcaccggtgtcccagcatct
gcgggcagtagtttggactgtctccaggacgacagcccgccccactggctgaaatccctg
caggcgctgacggaggcagatgggcccggtggctcgggggcagcgccccaggcacagcac
accggcctgctggacgcagcggcccagctctcgctgcacagagccggctgggccccttac
ctcccgccccctacactcactcccagccagttccactctccacccccaggcttccagaca
gccttcagacccccggcgcagaccgccacggacctcctacagagcgccggcatggaccgc
cactag
DBGET
integrated database retrieval system
