Electrophorus electricus (electric eel): 113579949
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Entry
113579949 CDS
T05787
Symbol
rfc1
Name
(RefSeq) replication factor C subunit 1
KO
K10754
replication factor C subunit 1
Organism
eee
Electrophorus electricus (electric eel)
Pathway
eee03030
DNA replication
eee03410
Base excision repair
eee03420
Nucleotide excision repair
eee03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
eee00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
113579949 (rfc1)
03410 Base excision repair
113579949 (rfc1)
03420 Nucleotide excision repair
113579949 (rfc1)
03430 Mismatch repair
113579949 (rfc1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
eee03032
]
113579949 (rfc1)
03400 DNA repair and recombination proteins [BR:
eee03400
]
113579949 (rfc1)
DNA replication proteins [BR:
eee03032
]
Eukaryotic type
DNA Replication Elongation Factors
RFC (replication factor C)
113579949 (rfc1)
DNA repair and recombination proteins [BR:
eee03400
]
Eukaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
RFC (replication factor C)
113579949 (rfc1)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RFC1
AAA_lid_RFC1
BRCT
AAA
PTCB-BRCT
AAA_22
AAA_30
AAA_5
AAA_7
AAA_14
Rad17
AAA_33
RuvB_N
AAA_16
BRCT_2
AAA_17
RNA_helicase
nSTAND3
NTPase_1
AAA_19
AAA_18
Motif
Other DBs
NCBI-GeneID:
113579949
NCBI-ProteinID:
XP_026870010
LinkDB
All DBs
Position
Unknown
AA seq
1146 aa
AA seq
DB search
MDIRRFFAPTKPAAPKPTQGSTSTDQDHARNKKKPSSKITSPKSDKRSVKRKKRLIVDSE
SEEEEEKKEGKQKKDPKEKNASSGKKNPVTYVSDSDSDEVFTSLKKSSKPGKNGCSQMTS
HLGKSEEAQTASLKSPVTSSAPSLKRGTKNGVSLTPTKAAAPQPRYTPTSVVDYFGSSVI
QRSDKKLVAATSTKRKAPVQDHESSCSDELIAKQLQMDEDIELEKQIHEDEEFAKTLAML
DEAPLPKKARVDTISPLKDSSRTSSADTKAKAKSDSPKQSLVRASSKLALLKRRADKEEE
RKKNKQEKKGKMVVSPKKEPATPTTSEMAVTPKTDRAFAAASKSRSFSTPKSGSSKTSPT
KPETSPEDSEKKRVNSAAYRSYLNREGPRALGSKEIPQGEENCLEGCVFVLTGVLESMER
EDAKSLIERYGGKVTGNVSRKTTYLVLGRDSGASKTEKAHSFGTKILNEDELLDLIRTKP
GKKSKYEIAAEAENKRTKSQTLGSKGKATPPRLKHTPLGPSPAKKSLSAGKTRAVSTSSP
GTSRASPRRGTASDVKKSLKFGCGKTPPPAPHHATDGDTCSLLWVDKYRPRSLKNLIGQQ
GEQSCANKLLRWLQHWHKHHRGDTKTAPRFGKFGGKDDGSGFKAALLSGPPGVGKTTTAA
LVCEELGYSYVEMNASSTRSRTSLKEVIAESLNNTSIKNFYSGTSQTVSDKHVLIMDEVD
GMAGNEDRGGIQELIGLIKQSKIPIICMCNDRNHQKIRSLANYCFDLRFQRPRVEQIKGA
MMSIAFKEGLKVPPPALNEIILATNQDIRQVLHNLSMWTATDKVMTYDQAKADAKNARKD
MKMGPFDVCRKVFTSGEETAHMSLIDKSDLFFHDYSLAPLFVQENYIHVRPAAAGGNLKN
YLVLLSKTADSICDGDLVDKQIRSKQTWSLLPTQAIYASVLPGELMRGYMGQFPTFPSWL
GKNSATNKHSRIVQELASHMGLKTLCSKDAVNLDYLPYLRSALLVPLQSHGAEGTSQTVK
LMDDYDIIKEDFDSIIEISSWGGQPDPYSRLDSKVKAAFTRAYNRESHLTPYSIQMVKKG
RRSTTDFESLDPENDLQGQEEEEEEEGLTADAMIRRKKTKLTKEPKQEKAGDSGKGKGKG
KGKGKK
NT seq
3441 nt
NT seq
+upstream
nt +downstream
nt
atggatatacgcaggttctttgcgcccacaaaacccgcggcgcccaaacccacccagggc
agtaccagtactgaccaagatcacgcaaggaataaaaagaaaccgtcctccaagatcaca
agccctaaatctgataaacgctcagtaaaacgaaagaaaagactaattgtcgattcagag
tctgaggaggaagaagagaagaaagaaggaaaacagaagaaagatcccaaagagaagaat
gcttcctcaggaaagaagaaccctgttacttatgtgtctgattcagattcggacgaagtg
ttcacatcgctgaaaaagtcctccaaacctggcaagaatggatgtagccagatgacttca
cacttgggaaagtcagaggaggcacaaactgcatctctcaaatcaccggtcacgtcctcg
gcacccagcttgaagagggggacgaagaacggagtcagtttgaccccaacaaaggcagct
gcgccccagcccaggtacacccccacctctgtagtggattacttcggcagcagtgtcatc
cagaggtcggacaagaaactcgtggctgctaccagcaccaagagaaaagcaccagtacaa
gaccatgagtcgtcgtgcagtgatgagctcattgcgaaacagttgcagatggatgaggac
atagagttggagaagcagatccatgaagatgaagagtttgcaaaaacgttggccatgttg
gatgaggccccattgcctaaaaaggcccgtgtagacaccatctcgcccttgaaagacagt
tccaggaccagctctgcggacaccaaggctaaggcaaagagtgattcaccgaagcagagc
ctcgtgagggcaagttccaagctggccctgctcaaaaggagagctgacaaagaggaggag
cgaaagaaaaacaagcaggaaaagaaaggcaagatggtcgtctctccgaaaaaagagcca
gccaccccaaccacatcggagatggcggtcacgcccaaaacggacagggcgtttgccgca
gcctccaaatcaagaagcttttccacacctaagagtggcagtagtaagacgtctcccaca
aagcctgagactagtccagaggactctgagaagaagcgggtgaattcagcagcttaccgc
agctaccttaaccgagagggacctcgtgccctgggctccaaggagatccctcagggagag
gagaactgcctggaaggctgtgtgtttgtgctgacaggggttttggagtctatggagcgg
gaagatgcaaagtcattaattgagcgatatggtggtaaagttactgggaatgtgagccgc
aaaaccacgtacctggtgttgggccgtgacagcggagcctccaagacggagaaggcccac
agttttggaaccaagatcctaaatgaggatgaactgctggacctgatccgaaccaaacct
ggcaaaaagtccaaatatgaaatcgcagctgaggctgagaataaacgcactaaatcacag
accctgggctccaaaggcaaagccacccctccacggctgaagcacacacccctggggcca
agcccagccaagaagagcctatcggcgggaaagacccgggctgtttccacttccagccct
ggaacctccagagcttccccccgacgtggcactgcatccgatgtgaagaagagcctgaag
tttggctgcggaaagaccccgccccctgcaccacaccatgccacagatggtgacacctgc
agcttgctgtgggtggataagtaccgtccccgcagcctgaagaatctgataggacagcag
ggagagcagagctgtgccaataagctgttgagatggttgcagcattggcacaagcaccac
agaggcgataccaaaacagcacctaggtttggtaagtttgggggaaaggatgatggttct
ggttttaaggctgccctgttgtctgggcccccgggtgtagggaagaccactactgctgcc
cttgtgtgtgaggagttgggctacagttacgtagagatgaacgccagctccacacgaagc
aggaccagtctgaaagaagtgattgccgagtccctcaataacacaagcattaagaacttc
tactcaggtacatctcaaacagtcagcgataagcatgttcttatcatggacgaggtggac
ggtatggcaggaaatgaagacagaggtggaatacaggagttgattggtctgataaagcag
tcgaagatccccatcatctgcatgtgtaatgaccgtaaccatcagaaaatccgctcgctc
gccaactactgcttcgacctgcgcttccagcgcccccgtgtggaacagataaagggtgct
atgatgtccattgcttttaaagaaggtttaaaggtcccgcctccagcactcaatgaaatc
attctggcaacgaatcaggacattcggcaggtgctgcataatctgagcatgtggacggcc
acagacaaagtcatgacctatgaccaggcaaaagcggatgctaagaatgccaggaaggac
atgaaaatgggtccatttgacgtatgcagaaaagtgtttacctcaggagaggagaccgcc
cacatgtctttgattgacaagtcagatcttttcttccatgactactcactagcgccactg
tttgtccaagagaactacattcatgtacgaccagctgcagcagggggaaatctgaagaat
tatttggtcttgctgagtaaaactgcagacagcatctgtgatggagatctagtggacaaa
cagatccgttctaaacagacctggtctctactacccacacaggcgatctatgccagtgta
ctgcctggtgagctgatgcgaggttatatgggtcagtttcccactttccccagctggctg
ggcaagaactccgccacgaacaaacacagtcgtatcgtacaggagttggcctcacacatg
ggcctgaagactttgtgtagtaaggatgcggtgaatctggactacctgccttatctgcgc
tctgcgctattagtgcctctgcagtcacatggagcagagggaaccagtcagactgtaaag
ctcatggatgactatgacatcatcaaagaggactttgacagcatcattgagatcagtagc
tggggtggacagcctgatccctactccaggctcgactccaaggtgaaagctgcattcaca
cgtgcgtacaacagggagtcccacctgaccccatactcaatacagatggtgaagaaaggt
cgccgaagtaccaccgattttgagagcttagaccctgaaaatgacctccaagggcaggaa
gaggaggaggaagaggaaggtctcactgctgatgccatgatcaggcggaagaagactaaa
ctcaccaaagagcccaaacaggagaaagcaggggattctgggaagggaaagggcaagggc
aaaggaaagggcaagaagtga
DBGET
integrated database retrieval system
