KEGG   Electrophorus electricus (electric eel): 113580869
Entry
113580869         CDS       T05787                                 
Symbol
thoc6
Name
(RefSeq) THO complex subunit 6 homolog
  KO
K13175  THO complex subunit 6
Organism
eee  Electrophorus electricus (electric eel)
Pathway
eee03013  Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:eee00001]
 09120 Genetic Information Processing
  09122 Translation
   03013 Nucleocytoplasmic transport
    113580869 (thoc6)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:eee03019]
    113580869 (thoc6)
   03041 Spliceosome [BR:eee03041]
    113580869 (thoc6)
Messenger RNA biogenesis [BR:eee03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Transport factors
    TREX complex
     113580869 (thoc6)
Spliceosome [BR:eee03041]
 Other splicing related proteins
  Spliceosome associated proteins (SAPs)
   TREX complex
    113580869 (thoc6)
SSDB
Motif
Pfam: WD40_WDHD1_1st WD40 Beta-prop_TEP1_2nd WD40_Prp19 WD40_CDC20-Fz Beta-prop_EML WDR55 ANAPC4_WD40 Beta-prop_EML_2 WD40_MABP1-WDR62_2nd Beta-prop_RIG_2nd WDR54 EIF3I NBCH_WD40 Beta-prop_SCAP Beta-prop_IP5PC_F Beta-prop_CAF1B_HIR1 Beta-prop_EIPR1 Beta-prop_WDR19_1st WD40_like Beta-prop_WDR90_POC16_2nd Beta-prop_IFT122_1st Beta-prop_LRRK2 Beta-prop_IFT140_1st Beta-prop_NOL10_N Beta-prop_WDR75_1st WDR90_beta-prop_4th WD40_MABP1-WDR62_1st Beta-prop_DCAF4 Beta-prop_Vps41 WD40_RFWD3
Other DBs
NCBI-GeneID: 113580869
NCBI-ProteinID: XP_026871488
LinkDB
Position
Unknown
AA seq 323 aa
MGPVELLHMSVFSQTFSPCGRFLAAGNNYGEIAVFSLSAALSPDATGMSQKPILTFAAHE
GPVFSLISTDTHLLSAGNGEISAWSWAELTKRSTKALWTRRPNYKTSLEIPEINAMIVNS
KDNSLIVGGGDNNIHIMDMETGTFKSVLQGHTDYIHCLSFREREGELLSGGEDGAVRIWD
ARTGQTVHCIEVFKYEECTRPQFGKWIGCLTTDSDWMLCGGGPALSLWHLRSMSPTSVFS
LAGCQREAVFYQDLILTVGEGPYVSHCVPGGTVKAQIPSSSPSLNTLTLNLNSNEHRVMT
TAGSSDQIDVFTNFSYRAFSLSF
NT seq 972 nt   +upstreamnt  +downstreamnt
atgggcccagttgagcttctccacatgtccgtgttctcgcagacgttctccccctgcggt
cgttttttggcagctggtaataactacggagagatcgctgtgttcagcctgtccgctgct
ctgagcccagacgcaacaggcatgagtcagaaacccattctcacatttgctgcccatgag
ggccctgtgttctccctgatctccacagacacgcatctcctgagtgcgggcaacggtgaa
atcagtgcatggagctgggctgagctcaccaagaggagcaccaaagctttatggacaagg
agacccaattataaaaccagccttgagattccagagatcaatgctatgattgtcaattca
aaagacaacagcttgatagttggcgggggtgacaataacattcacatcatggatatggaa
accgggaccttcaagtctgtactgcagggccacacagactacatccactgcctgtctttc
agggagagagagggggagcttctctcaggtggagaggatggggcggtcaggatatgggac
gctcggacaggccaaacggtgcactgtattgaggtatttaagtatgaggaatgcacccgc
ccccagtttgggaagtggattggctgccttacgacagactctgattggatgctctgtgga
ggaggcccggctctctctctctggcacctgcgctccatgtctcctacctccgtcttctct
ctagctggctgccagagagaggctgtcttctaccaggacctgatcctgacagtaggcgag
gggccgtacgtgtcccactgtgttccgggaggcaccgtaaaggctcagatcccgtccagt
tccccctcactcaacacgcttaccctgaacctcaacagcaatgaacacagggtaatgaca
actgcaggcagtagtgaccagatcgatgttttcaccaacttctcctacagagccttctct
ctgtctttctga

DBGET integrated database retrieval system