Electrophorus electricus (electric eel): 113581860
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Entry
113581860 CDS
T05787
Symbol
xab2
Name
(RefSeq) pre-mRNA-splicing factor SYF1
KO
K12867
pre-mRNA-splicing factor SYF1
Organism
eee
Electrophorus electricus (electric eel)
Pathway
eee03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
eee00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
113581860 (xab2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
eee03019
]
113581860 (xab2)
03041 Spliceosome [BR:
eee03041
]
113581860 (xab2)
Messenger RNA biogenesis [BR:
eee03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Other transport factors
113581860 (xab2)
Spliceosome [BR:
eee03041
]
Complex B
Other components
Prp19-related factors
113581860 (xab2)
Complex C
113581860 (xab2)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
HAT_Syf1_CNRKL1_C
HAT_Syf1_M
HAT_Syf1_CNRKL1_N
HAT_PRP39_C
HAT_PRP39_N
TPR_14
Suf
TPR_19
TPR_2
TPR_8
TPR_12
TPR_15
ARM_TT21_C
TPR_16
ARM_TT21
NRDE-2
RPN7
TPR_1
Tcf25
DUF4515
LTN1_E3_ligase_6th
DUF7041
Motif
Other DBs
NCBI-GeneID:
113581860
NCBI-ProteinID:
XP_026873106
LinkDB
All DBs
Position
Unknown
AA seq
849 aa
AA seq
DB search
MPVLNAKPDVVFEEDDLPYEEEIIRNPYSVKCWMRYIEHKQNGPKSVLNMIYERALKELP
GSYKLWYNYLRERRKQVKGKCVTDPAYEEINNCHERALVFMHKMPRIWLDYCQFMVSQRK
ITRSRRTFDRALRALPITQHSRIWPLYLTFARNLPLPETAIRVYRRYLKLSPENAEEYID
YLRSVGRLDEAAVRLGAVVNDENFVSKEGKSNYQLWHELCDLISQNPDKVTSLNVGAIIR
GGLTRFTDQLGKLWCSLADYYIRSGHFEKARDVYEEAIQTVVTVRDFTQVFDSYAQFEES
MIAAKMETTSEMGNDEDDDIDLELRLARFEQLITRRPLLLNSVLLRQNPHNVHEWHKRVK
LYEGNPRQIINTYTEAVQTVDPVKATGKPHSLWVAFARFYEDNDQLDDARTIFEKATKVH
YKQVDDLAAVWCEYGEMELRYENYDQALRILRKATAIPSRKAEYFDASEPVQNRVYKSLK
VWSMLADLEESLGTFQSTKAVYDRIIDLRIATPQIIINYAMFLEEHSYFEESFKAYERGI
ALFRWPNVYDIWNTYLTKFIDRYGGKKLERARDLFEQALDGCPAKFAKTIYLLYAKLEEE
FGLARHAMAVYERATQAVEAEERHYMFNIYIKRAAEIYGVTHTRSIYQKAIEVLPDEHAR
DMCLRFADLESKLGEIDRARAIYSYCSQMCDPRMTANFWQTWKEFEIRHGNEDTIREMLR
IKRSVQATYNTQVNFMSSQMLKATSSATGTVSDLAPGQSGVDDMKMLEQKAQLLAAEAEQ
DKPKPKEKILFVRSDASRSELAELAKQANPDEINIDDEEEDEDGDEEPDEVQLEQKSVPT
AVFGGLKDE
NT seq
2550 nt
NT seq
+upstream
nt +downstream
nt
atgccggttcttaacgcaaaaccagacgttgtgtttgaagaagatgatttgccatacgaa
gaagaaataatacggaatccatattccgtcaagtgctggatgagatatattgagcacaaa
caaaatggacccaagtccgtacttaatatgatatacgaacgagcgcttaaagagttgcct
ggcagttacaagttgtggtacaactatctgagagagaggaggaagcaagttaaaggaaaa
tgcgtaacagatccagcatatgaagagatcaataactgccacgagagagcgctggtgttc
atgcacaagatgccgaggatatggctggattactgtcagttcatggtgtcccagcgcaaa
atcacacggagccgtcggacgtttgaccgtgcgctcagggccctgcccattacccagcat
tcccggatttggcccttgtacctcacctttgctcgaaacctacccctgcctgagaccgcc
attcgtgtttaccgcaggtacctcaagctttctccagagaacgcggaggagtacattgat
tatctgcgctccgttggccgtctggatgaagcagcagtccgcttaggggctgtggtcaat
gatgaaaactttgtctcaaaggaggggaagtcaaactaccagctctggcacgagctgtgc
gacctcatctctcagaacccggacaaggtgacctcgttgaacgtgggcgccatcatccgt
ggtgggctcactcgcttcacagaccagttgggcaagctgtggtgctccctggccgattac
tacatccgcagcggccactttgagaaggcgcgggatgtgtacgaggaggcgatccagacg
gtggtcaccgtccgagacttcacgcaggtgtttgacagctacgcccagtttgaggagagc
atgattgctgccaagatggagaccacgtcggagatgggaaatgacgaggacgatgacatc
gacctggagttgcgcttggcgcggttcgagcagctcatcacccggcggccgctcttactg
aacagcgtgctgctgcggcagaacccgcacaacgttcacgagtggcacaagagggtcaaa
ctctacgagggcaaccctcgacagataatcaacacctacacagaggccgtacagacagtg
gaccccgtgaaggccacggggaagccccactccctctgggtcgccttcgccaggttctac
gaggacaacgaccagctggatgatgcccggaccatctttgagaaagccaccaaggttcat
tacaagcaggtggatgacctggccgcagtgtggtgcgaatacggagagatggagctgcgg
tacgagaactacgaccaggccctccgcatcctcaggaaagccactgccatcccgtcaagg
aaagcggagtactttgacgcatcagaaccggtgcagaatcgagtgtacaaatcactgaag
gtctggtctatgctagcagatctggaggagagtctcggcacgttccagtcaacaaaggca
gtgtatgaccgcattatcgacctccgtatcgccacacctcagatcatcattaactatgcc
atgttcctcgaggaacacagttactttgaggagagcttcaaggcgtacgagcgtggcatt
gcgctcttcaggtggcctaacgtctatgacatctggaacacgtacctcaccaagttcatc
gaccgctacggaggcaagaagctggaaagagcacgggacctgtttgagcaggctctggat
gggtgtccggccaagtttgccaaaaccatctacctgctgtacgccaagctggaggaagag
tttggcctagccaggcacgccatggccgtgtacgagagagccacgcaggctgtggaggcc
gaagaacgccattacatgttcaacatctacataaagagggctgcagagatctacggggtc
acccacaccaggtccatctaccagaaagccatcgaggtccttccagatgagcatgcccga
gacatgtgtctgcgctttgctgacctggagagtaaactaggggagatcgaccgggcgagg
gccatctactcctactgctcccagatgtgtgaccccaggatgacggccaatttctggcag
acgtggaaggagtttgagattcgtcatggaaacgaggacacgatccgcgagatgctgcgc
ataaagcgcagcgtccaggcaacctataacacacaagtcaacttcatgtcctcgcagatg
ctcaaagcgaccagcagcgccacaggcacggtgtcagacctggccccgggtcagagtggt
gtggatgatatgaagatgttggaacagaaggcccagctacttgctgcagaggctgaacag
gacaaacccaaacccaaagagaagatcctctttgtcaggagtgacgcgtctcgtagtgaa
cttgcggaactggccaaacaagccaacccagatgaaattaacattgatgatgaggaggag
gatgaagacggggatgaggaaccagacgaggtacagctggagcagaagagcgtccccact
gccgtctttggagggctgaaggatgagtga
DBGET
integrated database retrieval system