Electrophorus electricus (electric eel): 113583397 Help Entry 113583397         CDS       T05787                                  Symbol skiv2l Name (RefSeq) helicase SKI2W isoform X1   KO K12599   antiviral helicase SKI2 [EC:5.6.2.6] Organism eee  Electrophorus electricus (electric eel) Pathway eee03018   RNA degradation Brite KEGG Orthology (KO) [BR:eee00001]  09120 Genetic Information Processing   09123 Folding, sorting and degradation    03018 RNA degradation     113583397 (skiv2l)  09180 Brite Hierarchies   09182 Protein families: genetic information processing    03019 Messenger RNA biogenesis [BR:eee03019]     113583397 (skiv2l) Enzymes [BR:eee01000]  5. Isomerases   5.6  Isomerases altering macromolecular conformation    5.6.2  Enzymes altering nucleic acid conformation     5.6.2.6  RNA 3'-5' helicase      113583397 (skiv2l) Messenger RNA biogenesis [BR:eee03019]  Eukaryotic type   mRNA surveillance and transport factors    Transport factors     eIF4F and regulatory proteins      113583397 (skiv2l)   mRNA degradation factors    3'-5' decay     Ski complex      113583397 (skiv2l) BRITE hierarchy SSDB OrthologParalogGFIT Motif Pfam:  DSHCT Ski2_N MTR4_beta-barrel DEAD Helicase_C DEXQc_Suv3 ResIII MTR4-like_stalk HTH_23 DUF5958 DUF3516 Motif Other DBs NCBI-GeneID:  113583397 NCBI-ProteinID:  XP_026875515 LinkDB All DBs Position Unknown AA seq 1260 aa AA seqDB search MDKIALPPPGRDDLPLALLEMGCSGRFELLTRPLPSHSPLPPQSTLPHGLPPTSLDLKMD VEKRFLQDPAWMPIHDTNDAFQTFLKLTKRDRHVDSLLHCSLSPLHSSLSVVRDPTTGML LDFTEVLLEHTGLSAKNSLSLHRQPGPPSESLRGSNTNYPFLPGGMEELTLEQIQKKSEM EEDLDLEHDLLTVPPGLKAGMDFSHKEAKTTKGDVNLLSLLSTFDDIIDVLPDEKEKGME SEASKPPRTNSLEDLGIKDTPAPSAPPSAPPSALPSAPPSAPPSDRADDGMKKDRKEKVE KKWAMPVDISSPCDDFYKRVPDPAFKYPFELDVFQKQAILRLEAHDSVFIAAHTSAGKTV VAEYAIALSQKHMTRTIYTSPIKALSNQKFRDFKNTFGDVGLLTGDVQLSPEASCLIMTT EILRSMLYNGSEVIRDLEWVIFDEVHYINDAERGVVWEEVLIMLPEHVSIILLSATVPNA VEFSEWIGRIKKRPIYVISTVKRPVPLEHYLYTGNSTKTQKELFLLLDATGSFLTTGYYA AVEAKKERTSKHAQSFGTKNPSHNTTPSQDRAVWQTLLNYLSVRQQTPVVAFTFSRTRCD DNARALTMLDLTSSVEKNEVHSFFQKSLSRLRGGDRQLPQILQMRDLLKRGIAVHHSGIL PILKEVIEMLFSRGLVKVLFATETFAMGVNMPTRTVVFDSIRKHDGTGFRNLLPGEYIQM AGRAGRRGLDATGTVIILCKAGVHDMADLHAMMLGKPTVLQSQFRLTYTMILNLLRVEAL RVTDMMRRSFSESHRDTQAHERRITELRGVLSSLPPLDTEGQLSDLLSYYHTVTELRITA ETLQQAVMESMSGLKALSVGRVVVVNNAQHLNALAVILQVSSDAVNRVFTVLIMCEKGNE ETKCAPEAGRGYTHLHSNRLFIPEGPCSHTVQKLKAQDITAITVKTLKVIPERIIDNYNK RQQPRFRLDPPGQAISTATQELLRLAEANPDGVTTLDPVNDLHLKGVDVVEAVMRQRVLQ DSLKDFHCTHSPTFTEQFARVQERMGVQEELDRLLFLVSDQSLTLLPEYHQRIKVLEALN YIDGSGAVQLKGRVACQISSHELLLTELLFENTLSPMAPEESAALLSCLVFTQNTQVEPH VPNTIQEGIDRVLIVAQRIGDLQRDCGLSQTAEDFAAQFKFGLTEVVYCWARGMPFAEIA QLTDVQEGTVVRCIQRLDEVLKEVRQAARIVGDSVLGSKMEKASLAIRRDIVFTASLYTH NT seq 3783 nt NT seq  +upstreamnt  +downstreamnt atggataaaatagctttacctccacctggccgtgatgacttgcctctcgccttgttggag atgggctgttcagggaggtttgagcttctcactcgcccgctgcctagccacagtccgcta cctccgcagagcacgctcccccatggccttcctcccacaagcttagacttgaagatggac gtagagaaacgttttctgcaggatccagcgtggatgcccatacatgacacaaacgatgca ttccagacgtttctgaagttgaccaaaagagatagacatgtggactcgttgctgcactgt tctctgtcccctctgcactccagcctgtctgtggtgagagatcccaccactggcatgctg ctagacttcactgaggtgttactggaacacactgggctgtcagcgaagaactctctatca ttgcacagacagccaggacctccatctgaaagtctgcgtggcagcaatacaaactaccct ttcctgccaggtggtatggaagagctgacattggagcaaatacagaagaagtcagagatg gaggaggacctcgacttggaacatgatttactaacagtccctccaggactgaaagctggc atggacttcagtcacaaagaagccaaaaccacgaaaggcgatgtgaatctgctatcgctt ctgtccacttttgatgacataattgacgtcttgccggatgaaaaggagaaaggcatggaa agtgaagcctcaaaacctcccagaaccaacagcttggaggatctgggcattaaggacact ccagccccctctgccccgccctctgccccaccctctgccctgccctctgccccgccctct gccccgccctctgacagggcagacgacgggatgaaaaaagacagaaaggagaaggtagag aagaagtgggccatgcctgtggacatcagctcaccatgtgacgatttctacaaacgggtg ccagaccctgcctttaagtacccgtttgagctggacgtgttccagaagcaggctatcctc aggctggaggcacatgactctgtattcattgctgctcacacatcagctggcaagactgtg gtggctgagtatgccatcgcactttcccaaaaacacatgaccaggaccatctatacctct cctatcaaggccttgtccaatcagaaattccgggattttaagaatacttttggggatgtg ggacttttgacaggagatgtgcagcttagcccggaggcgtcctgtctcatcatgaccact gaaatattgaggtccatgctgtataatggatcggaagtgatccgggacttggaatgggtc atatttgacgaagttcattatatcaacgatgcagagaggggtgtggtttgggaggaggtg ctaatcatgctgccagaacatgttagcatcattttgctcagtgcgacagtgcccaatgct gtggagtttagcgagtggattgggcgcattaagaagaggcccatctatgtgatcagtaca gtgaagaggccagtgcccctggagcactacctgtacacgggaaacagcaccaagacccag aaagagctcttccttctcctcgatgctactggaagcttcctcaccacagggtactacgct gccgtggaggccaaaaaggagcgcaccagtaaacacgcacagtcgttcggcacaaagaac ccctcgcacaacaccacgcccagccaggaccgtgccgtgtggcagacactcctcaactac ctgtccgtgcggcagcagactccggttgtggccttcaccttctctcgcacacggtgtgac gacaacgcccgtgccctcaccatgctggacctgaccagctcggtggagaagaatgaggtc cactccttcttccagaagagcctgagccggctgaggggtggtgaccgacagctcccgcag attttgcaaatgagagacctgctgaagagaggcatcgctgtgcatcacagtggcatcctg ccaatcctgaaggaggtcattgaaatgctcttctcgagaggtcttgtgaaggtcctgttt gccacagagacatttgccatgggggttaacatgccaacccggaccgtggtgttcgacagc atccgcaagcacgatggcaccggcttcagaaacctcctgcctggtgagtacattcagatg gcaggccgagcaggcaggagaggtctagatgccacaggcaccgtcatcatcctctgcaag gctggagtgcacgacatggcagaccttcacgccatgatgctggggaagccgactgtgctg cagtctcaattcaggctcacctacaccatgatccttaacctcttgcgtgtggaggcactt cgcgtcactgacatgatgcgcaggagcttctcggagagccacagggatacacaggcccat gagaggaggatcacggagttgagaggtgtgctctcctctctgcctcctctggacacagag ggtcagttatctgacctgctgtcatattaccacacagttacagaactccgcatcacagca gagactctgcaacaagcagtcatggagtccatgagcggtctgaaggcactctctgtgggc cgcgtggttgtggtcaacaatgcccaacaccttaatgcactggcagtcatcttgcaggtg tccagtgacgctgtgaatcgggtcttcaccgtcctcatcatgtgtgagaaagggaatgag gagaccaaatgcgctcccgaggctggccgaggatacacacacctccacagcaaccgcctc ttcatccccgagggtccctgtagtcacacagtgcagaagctgaaggcacaggacatcacc gccatcacagttaaaacgctgaaggtcattccagagcgtatcattgacaactacaacaag aggcagcagccccgtttcagactggatccacccgggcaggccatttccaccgccacccag gaacttctgcgattggcggaggccaacccggacggcgtaacgaccctcgacccagtgaat gaccttcacctgaagggggtggatgtagtggaggctgtgatgagacaacgtgtgctccag gacagcctcaaagacttccattgcacccactcacccaccttcacggagcagtttgcacgt gtgcaggagagaatgggtgtgcaagaggagctggacaggctgctgttcctggtgtctgat cagtcgctcaccctgctacccgagtaccatcagagaattaaggtgctggaggccctgaac tacatcgacggcagcggcgctgtgcagttgaagggccgcgtggcctgtcagatcagcagc cacgagctgctgctcactgagttgctgtttgagaacaccctgagccccatggccccggag gagagtgcagccctgctgtcctgcctcgtcttcacccagaacacacaagtagagccacac gtccccaacaccatacaggagggcattgaccgggtgctgatcgtggctcagcgcatcggc gacctgcagcgtgactgtgggctgtcacagacagctgaagactttgcggctcagttcaag ttcggcctgacggaggtggtttactgctgggctagaggcatgccctttgctgagatcgcc cagcttacggacgtgcaggaaggcacagtggtgcgttgtatccagaggctggatgaggtg ctgaaggaagtgagacaagctgcccgcatcgttggagactctgtgttgggcagtaagatg gagaaggcctccctggccatacgcagggacatcgtgttcacagcgtctctctacacacac tga

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