Electrophorus electricus (electric eel): 113584166
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Entry
113584166 CDS
T05787
Symbol
polr2a
Name
(RefSeq) DNA-directed RNA polymerase II subunit RPB1 isoform X1
KO
K03006
DNA-directed RNA polymerase II subunit RPB1 [EC:
2.7.7.6
]
Organism
eee
Electrophorus electricus (electric eel)
Pathway
eee03020
RNA polymerase
eee03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
eee00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
113584166 (polr2a)
09124 Replication and repair
03420 Nucleotide excision repair
113584166 (polr2a)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
eee03021
]
113584166 (polr2a)
03400 DNA repair and recombination proteins [BR:
eee03400
]
113584166 (polr2a)
Enzymes [BR:
eee01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
113584166 (polr2a)
Transcription machinery [BR:
eee03021
]
Eukaryotic type
RNA polymerase II system
RNA polymerase II
Core subunits
113584166 (polr2a)
DNA repair and recombination proteins [BR:
eee03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase II complex
113584166 (polr2a)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RNA_pol_Rpb1_1
RNA_pol_Rpb1_5
RNA_pol_Rpb1_2
RNA_pol_Rpb1_6
RNA_pol_Rpb1_7
RNA_pol_Rpb1_3
RNA_pol_Rpb1_R
RNA_pol_Rpb1_4
Motif
Other DBs
NCBI-GeneID:
113584166
NCBI-ProteinID:
XP_026876714
LinkDB
All DBs
Position
Unknown
AA seq
1966 aa
AA seq
DB search
MHGPPSSDSACPLRLIKRVQFGIISPDELKRMSVTEGGIKYPETTEGGRPKLGGLMDPRQ
GVIERTGRCQTCAGNMTECPGHFGHIELAKPVFHVGFLTKIMKVLRCVCFFCSKLLVDSN
NPKIKDILAKSKGQPRKRLTHVYDLCKGKNICEGGEEMDNKFGVEQQENDEDITKEKGHG
GCGRYQPRIRRVGLELYAEWKHVNEDSQEKKILLSPERVHEIFKRIADEEDVILGMDPKY
ARPEWMIVTVLPVPPLAVRPAVVMQGSARNQDDLTHKLADIVKINNQLRRNEQSGAAAHV
IAEDVKLLQFHVATMVDNELPGLPRAMQKSGRPLKSIKQRLKGKEGRVRGNLMGKRVDFS
ARTVITPDPNLQIDQVGVPRSIAANMTFPEIVTPFNIDRLQELVRRGNSQYPGAKYIIRD
NGDRIDLRFHPKPSDLHLQIGYKVERHMCDGDIIIFNRQPTLHKMSMMGHRVRILPWSTF
RLNLSVTTPYNADFDGDEMNLHLPQSLETRAEIQELAMVPRMIVTPQSNRPVMGIVQDTL
TAVRKFTKRDVFLERGEVMNLLMFLSTWDGKVPQPAILKPRPLWTGKQIFSLIIPGHINV
IRTHSTHPDDEDSGPYKHISPGDTKVIVENGELIMGILCKKSLGTSAGSLVHISYLEMGH
DVTRLFYSNIQTVVNNWLLIEGHSIGIGDSIADAKTYLDIQNTIKKAKQDVIEVIEKAHN
NELEPTPGNTLRQTFENQVNRILNDARDKTGSSAQKSLSEYNNFKSMVVAGSKGSKINIS
QVIAVVGQQNVEGKRIPFGFKHRTLPHFIKDDYGPESRGFVENSYLAGLTPTEFFFHAMG
GREGLIDTAVKTAETGYIQRRLIKSMESIMVKYDATVRNSINQVVQLRYGEDGLAGEAVE
FQNMATLKPSNKAFEKKFKFDYTNERALRRTLQEDVLKDVLTNAHVQSSLEREFEKMRED
REILRAIFPTGDSKVVLPCNLARMIWNAQKIFRINPRTPTDLNPLRVVEGVHELSKKLVI
VNGDDPLSKQAQENATLLFNIHLRSTLCSRRMTEEFRLSTEAFDWLLGEIETKFNQSVVH
PGEMVGALAAQSLGEPATQMTLNTFHYAGVSAKNVTLGVPRLKELINISKRPKTPSLTVF
LLGQAARDAERAKDILCRLEHTTLRKVTANTAIYYDPNPQNTVVAEDQEWVNVYYEMPDF
DVTRISPWLLRIELDRKHMTDRKLTMEQIAEKINAGFGDDLNCIFNDDNAEKLVLRIRIM
NSDENKFQEDEEVVDKMDDDVFLRCIESNMLTDMTLQGIEQISKVYMHLPQTDNKKKIII
TEDGEFKALQEWILETDGVSLMRVLSEKDVDPVRTTSNDIVEIFTVLGIEAVRKALEREL
YHVISFDGSYVNYRHLALLCDTMTCRGHLMAITRHGINRQDTGPLMKCSFEETVDVLMES
SSHGECDPMKGVSENIMLGQLAPAGTGCFDLLLDAEKCKYGMEIPTNIPGISVAGPTGMF
FGSAPSPMSGMSPAMTPWNTGATPAYGAWSPSIVSGMTPGAAGFSPSAASDASGFSPGYS
PAWSPTPGSPGSPGPASPYIPSPGGAMSPNYSPTSPAYEPRSPGGYTPQSPGYSPTSPSY
SPTSPSYSPTSPNYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTS
PSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYS
PTSPSYSPTSPNYTPTSPSYSPTSPSYSPTSPSYSPTSPNYTPTSPNYSPTSPSYSPTSP
SYSPSSPRYTPQSPTYTPSSPSYSPSSPSYSPTSPKYTPTSPSYSPSSPEYTPTSPKYSP
TSPKYSPTSPKYSPTSPTYSPTTPKYSPTSPTYSPTSPTYTPTSPKYSPTSPTYSPTSPK
YSPTSPTYSPTSPKGSTYSPTSPGYSPTSPTYSPAISPDDSDEENN
NT seq
5901 nt
NT seq
+upstream
nt +downstream
nt
atgcacggaccgccttccagcgacagcgcatgcccattgcgcctcatcaagagagttcag
ttcggcatcatcagcccagatgagcttaaacggatgtcagttacagaagggggcatcaag
taccctgagaccacagaggggggtcgcccaaaactgggtggtctcatggacccccgacag
ggtgtcatagagcggacgggaagatgccagacatgtgcaggtaacatgactgagtgccca
ggacactttggacacattgagttggcaaaaccagtcttccatgtcggcttccttacaaaa
atcatgaaagtcctccgatgtgtgtgtttcttttgttccaaactgctggttgactcgaat
aacccaaagatcaaagatattctcgccaagtcgaaaggccagccgagaaagcgcctgaca
cacgtgtatgacttgtgtaaaggaaaaaatatttgtgagggcggggaggagatggacaac
aagtttggagtagagcagcaggaaaatgacgaggacataaccaaggagaagggtcacggt
ggctgtggcaggtaccagccccggatcaggcgcgtgggtctggagttgtatgcggaatgg
aagcacgtgaatgaggactctcaggagaagaagatcctgctcagccccgagagagtgcac
gagattttcaagcgcatcgcggacgaggaggacgtcatcctgggcatggaccccaaatac
gcgcggccagagtggatgatcgtcaccgtgctgcccgtgccgcccctggctgtcagacct
gcggtcgtcatgcaggggtctgctagaaaccaggatgacctgacacacaagctagctgac
attgtgaaaattaacaaccagctacggcggaacgagcagagcggagctgctgcccacgtt
atagcggaagacgtcaagctcctgcagttccacgtggccaccatggtggacaacgagctg
ccgggcttacctagggcgatgcagaaatcgggccgcccgctgaaatccatcaagcagagg
ttgaagggcaaagagggtcgagtgcgaggcaacctgatgggcaagcgtgtggacttctct
gctcgaacggtcatcacgcctgaccccaacctccagatcgaccaggtgggcgtccctcgc
tccatcgctgccaacatgaccttcccagagattgtcactccctttaacatcgacaggctc
caggagcttgtgaggagaggcaacagtcagtatccaggagccaaatatatcatccgtgac
aacggagaccgaatcgacctccgatttcaccccaaaccgagcgatcttcaccttcagatc
ggatataaggtggaacggcacatgtgcgatggtgacatcatcatctttaacagacagccc
accctgcacaaaatgtctatgatgggtcacagggttcgaatcttgccctggtctacattc
cgactcaacctcagtgtaacgaccccttacaacgctgactttgacggggatgagatgaac
ctgcacctgccacagtcgctggagacgcgcgcggagatccaggagctggccatggtgcca
cgcatgatcgtcacaccccagtccaacagacccgtcatgggaatcgtgcaggacactctc
actgcagtgcgcaagttcaccaagagagacgtctttctagagaggggggaggtgatgaac
ctgctgatgttcctctccacctgggacggcaaagtgccacagcccgccatcctgaaacca
cgccccctgtggaccggcaagcagattttcagcctgatcatcccaggccacatcaacgtc
atacgcacacacagcacccacccagacgacgaggacagcggcccctacaagcacatctcc
cctggcgacaccaaggtcattgtggagaacggcgagttgatcatggggatcctgtgcaag
aagtctctgggcacctctgccggttctctcgtccacatctcctacctggagatgggccat
gacgtcacgcgcctgttctactccaacatccagactgtggtcaacaactggctgctcatt
gagggtcattccatcggcatcggtgactctattgcggatgcaaagacatatcttgacatt
cagaacactattaagaaagccaagcaggatgtgatagaggtcatcgagaaagcccacaat
aacgagctggagcccacacctggaaacaccctgagacagacctttgagaaccaggtcaac
cgcattttgaatgacgctcgagacaagaccggatcctccgctcagaagtcactgtccgag
tacaacaacttcaagtccatggtggtggctggatccaagggttccaaaattaacatttca
caggttatcgctgtggtgggccagcagaacgtggagggcaagcgaatccccttcggcttc
aagcaccgcacccttccacacttcatcaaagacgactacggtcctgagagcagaggcttt
gttgagaactcctacctggctggactcacacccacggagttcttcttccatgctatggga
ggaagagagggtctgatcgatacggctgtcaaaacagccgagacaggttacatccagcgt
cgtctgatcaaatctatggagtcgatcatggtgaagtatgatgccacagtgagaaactcc
atcaaccaggtggtgcagctgcgctatggtgaggacgggctggcgggagaagccgtggag
ttccagaacatggccactctcaagccctccaacaaagccttcgagaagaagtttaagttt
gactacaccaacgagcgagctctccggcgcaccctgcaggaggacgtgttgaaggacgtg
ttgaccaacgcacacgtgcagagttccctagagagggagtttgagaagatgagagaagac
cgagagattctaagggctattttccctactggagacagcaaggtggtgctgccatgcaac
ctggccagaatgatctggaatgcgcagaagattttcagaatcaacccacgaactccaact
gatctcaatcctttaagagtggtggagggcgttcatgagctaagcaagaagctggtgatc
gtaaacggcgatgaccctttgagcaagcaggcccaggagaatgccaccctgctcttcaac
atccacctgcgctccaccctctgctcccgccgtatgacagaagagttcaggctcagtacg
gaggcctttgattggctgctgggggagattgagaccaagttcaatcagtctgttgttcac
ccgggggagatggtgggggcgttggctgcccagtctctgggtgagcccgccacccagatg
acgctgaacaccttccactacgccggagtgtcggccaagaacgtcaccctgggtgtgcct
cgactcaaagagctcatcaacatctccaagcgtcccaagaccccatcgctcactgtgttc
ctgctgggccaggcggcccgagacgcagagcgggccaaggacatcctgtgtcgcctggag
cacaccacgctgcgcaaggtcacggccaacacggccatctactatgaccccaacccgcag
aacacggtggtggcagaggaccaggagtgggttaacgtctactatgagatgcctgacttc
gatgtgacccgcatctccccctggctgctccgtattgagctggatcgcaaacacatgaca
gaccgcaagctcaccatggagcagatcgctgaaaagatcaatgcaggttttggggatgat
ctgaactgcatattcaatgacgacaacgccgagaaactggttctgcgtatccgcataatg
aacagcgacgagaacaagtttcaggaggatgaggaagtggtagacaagatggacgatgat
gtttttctgcggtgcatcgagtccaacatgctgaccgatatgaccctgcaaggcatcgaa
cagatcagcaaggtttacatgcatctccctcagacagacaacaagaaaaagatcatcatc
acagaggacggcgagttcaaggctctgcaggagtggattttggagacggacggcgtcagt
ctcatgagggtccttagcgagaaagacgtggatcccgtccggaccacctccaacgacatt
gtggagatctttaccgtccttggcattgaggccgtgcgcaaggctctagagagggagctg
taccatgtcatttccttcgacggctcctacgtcaactaccgccaccttgccctgctctgt
gacaccatgacctgcaggggtcacctgatggccatcacccgtcacggaatcaacaggcag
gacacggggccgctcatgaagtgctcgtttgaagagacggtggatgtgctgatggagtcg
tcctcccatggggagtgtgatcctatgaagggcgtgtctgagaacatcatgctgggccag
ctggctcccgcgggcacgggctgctttgacctgctgttggatgctgagaagtgcaaatat
ggcatggagatccccaccaacatcccgggcatcagcgtcgctgggccaacgggaatgttc
tttggctccgcccccagccccatgagtggcatgtctcctgccatgactccctggaacacg
ggcgccacgccagcttacggtgcctggtcgcccagcatagtgagtgggatgaccccagga
gctgcaggcttctctcccagtgctgcatccgatgccagtggcttctctccaggctactcc
ccagcgtggtctcctacacccggttctcctggctcaccagggccggccagcccttatatt
ccttctcctggtggagccatgtctccaaattactcccctacttcaccagcatatgagccg
cgctcccctggaggctacacaccccagagccctggctactccccgacgtcgccctcctat
tctccaacctctccttcgtactccccgacgagccccaactacagccccacatccccatct
tattctcccacctctccctcctactctccgacgtctccctcctactccccgacctccccg
agctactctccgacgtccccctcctattccccgacgtccccctcctattccccgacgtca
ccttcgtattctccgacgtcaccttcgtattctccgacgtcaccaagctactcgcccacg
tcaccaagctactcgcccacgtcaccaagctactcgcccacgtcgccctcgtattcgccc
acgtcgccctcgtattcgcccacgtcgccctcgtactccccgacgtcgccctcgtactcc
cccacgtcgccgagctacagcccgacgtctcccaactacacccccacgtctcccagctac
tccccaacctctccatcttacagccccacctctccctcatactcgcccacatccccaaac
tacacccccaccagccccaactactctccgacgtccccctcgtactcgcccacttctcca
tcctactctccatccagcccgcgctacaccccccagtcccccacctacaccccgagctct
ccctcttacagcccgagttctccatcttattcccccacctctccaaaatatacccccacc
tctccgtcttacagccccagctctcccgagtatacccccacctcgcccaaatactcaccc
acgtcgcccaaatactcacccacttctcccaaatacagtccgacgtctccaacgtactcg
cccactacacccaagtacagccctacatctcccacctattctccaacatctcccacttac
accccaaccagccccaaatactcccccacctcccctacctactccccaacatcacccaaa
tattcccccacttcccctacctactctcccactagccccaagggctccacctacagcccc
acctcccctggctacagccccacctctccaacatacagtccagccatcagccctgatgac
agtgatgaggagaacaactga
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integrated database retrieval system
