Electrophorus electricus (electric eel): 113584269
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Entry
113584269 CDS
T05787
Symbol
ddx6
Name
(RefSeq) probable ATP-dependent RNA helicase DDX6
KO
K12614
ATP-dependent RNA helicase DDX6/DHH1 [EC:
5.6.2.7
]
Organism
eee
Electrophorus electricus (electric eel)
Pathway
eee03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
eee00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
113584269 (ddx6)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
eee03019
]
113584269 (ddx6)
03036 Chromosome and associated proteins [BR:
eee03036
]
113584269 (ddx6)
Enzymes [BR:
eee01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
113584269 (ddx6)
Messenger RNA biogenesis [BR:
eee03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
Common to processing body (P body) and stress granule
113584269 (ddx6)
mRNA degradation factors
5'-3' decay
Decapping complex
113584269 (ddx6)
Chromosome and associated proteins [BR:
eee03036
]
Eukaryotic type
Gene silencing
piRNA pathway
113584269 (ddx6)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DEAD
Helicase_C
CMS1
SNF2-rel_dom
AAA_22
Motif
Other DBs
NCBI-GeneID:
113584269
NCBI-ProteinID:
XP_026876878
UniProt:
A0AAY5EKW6
LinkDB
All DBs
Position
Unknown
AA seq
484 aa
AA seq
DB search
MSTARTENPVILGLSNQNGQMRGSVKPPGGPGGGGGGAPTTQPTQIKAPSTINNGNSQPV
STANTVIKPGDDWKKNLKLPPKDMRMKTSDVTATKGNEFEDYCLKRELLMGIFEMGWEKP
SPIQEESIPIALSGRDILARAKNGTGKSGAYLIPLLERIDLKKDCIQALVIVPTRELALQ
VSQICIQVSKHMGGVKVMATTGGTNLRDDIMRLDETVHVVIATPGRILDLIKKGVAKVGQ
VQMIVLDEADKLLSQDFVQMMEEILSFLPKQRQILLYSATFPLSVQKFMNSHLQKPYEIN
LMEELTLKGVTQYYAYVTERQKVHCLNTLFSRLQINQSIIFCNSSQRVELLAKKISQLGY
SCFYIHAKMRQEHRNRVFHDFRNGLCRNLVCTDLFTRGIDIQAVNVVINFDFPKLGETYL
HRIGRSGRFGHLGLAINLITYDDRFNLKGIEEQLGTEIKPIPSSIDKSLYVAEYHSESSE
EVKQ
NT seq
1455 nt
NT seq
+upstream
nt +downstream
nt
atgagtacagccaggacagagaacccggtgattctgggattgtcaaaccagaatggccag
atgagagggtctgtaaagccaccaggggggccgggtgggggaggaggcggagctcccaca
acacagcccacccagatcaaagctccaagcacaatcaacaatggcaactctcagcctgtg
tctacagcgaacaccgtcatcaaacctggggatgactggaagaagaacttgaagcttcct
ccaaaggatatgcgtatgaaaacctctgacgtgactgctaccaaagggaatgaatttgaa
gattactgtctgaagcgggagttgctgatgggcatctttgagatgggctgggagaaaccg
tcacctatccaggaggagagcattcccattgctttgtctgggagggacattctagcccgg
gccaagaatggcacaggaaagagtggcgcctacctcattcccttacttgaacgcattgac
ctgaagaaagactgtattcaagcattggtcattgtgcccaccagagaactggctctgcag
gtgagccagatctgcatccaggtgagcaaacacatgggtggggtcaaggtcatggcaacc
acaggtggaaccaacctccgtgacgacatcatgaggcttgatgagacggtgcacgttgtt
attgctactcctggaagaattttggatctcatcaaaaaaggggtggccaaagttggacag
gtgcagatgattgtactggatgaggccgataagctcctgtcccaggactttgtgcagatg
atggaggagattctgagcttcttgcccaaacaaaggcaaattctgctgtactctgccacc
ttccctctcagtgtacagaagttcatgaactcccatctgcagaagccttacgagataaac
cttatggaggagctcacgctgaagggcgtgacccagtattatgcgtatgtgactgaaagg
cagaaagtccattgccttaacacactcttttctaggctccagatcaatcagtctataatc
ttttgcaactcatcccagcgagtggagctactggcaaagaagatctcgcagcttggctat
tcctgtttttacattcatgccaagatgagacaggagcacaggaaccgtgtgtttcacgat
ttcagaaatgggttgtgccgaaatctcgtttgcaccgatctcttcacaagaggaattgac
attcaagctgtgaatgtcgtgatcaactttgatttccccaaacttggggagacgtacctc
catcgtattggcagatctggtcgcttcgggcacttgggtctggccatcaacctcatcacc
tatgatgaccgcttcaacctaaagggcattgaagagcagttgggcactgagatcaagccc
atccccagcagcattgataagagcctgtatgtggcagagtaccacagtgagagcagcgag
gaggtcaaacagtga
DBGET
integrated database retrieval system
