Electrophorus electricus (electric eel): 113584288
Help
Entry
113584288 CDS
T05787
Name
(RefSeq) LOW QUALITY PROTEIN: transcription initiation factor TFIID subunit 4-like
KO
K03129
transcription initiation factor TFIID subunit 4
Organism
eee
Electrophorus electricus (electric eel)
Pathway
eee03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
eee00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
113584288
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
eee03021
]
113584288
03036 Chromosome and associated proteins [BR:
eee03036
]
113584288
Transcription machinery [BR:
eee03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIID
113584288
Coactivators
SAGA/TFTC/STAGA complex
113584288
Chromosome and associated proteins [BR:
eee03036
]
Eukaryotic type
Histone modification proteins
HAT complexes
TFTC complex
113584288
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TAF4
TAFH
TAF
Motif
Other DBs
NCBI-GeneID:
113584288
NCBI-ProteinID:
XP_026876905
LinkDB
All DBs
Position
Unknown
AA seq
959 aa
AA seq
DB search
MAGASDPLEEMLFSEVDEKAVSDLVGSLESQLGGPNSAAGAHGESRGGAHTAKQHPGRAL
PARVGTPSEDQPQQGQHAAARSQDAKPARISPDTRAKPPSLGSAASLEEGSTSETGASAS
GVQSHGPSASSGVSDGVTSPPVSIHAGNKGATPGSGETSGACDTRPKHLSPTARSTRAAA
QSLNGDGGAVTSTNSPTDPAATDASAAAVFSSATATTCANTTTFTVSNAGASATAIALDR
GTPTIALRRLPSHIVASIAQSRNGTAVSALVQQAARTGETSPAPQVNHARNCDGAEAKSG
APSASKVVVPGQPGTVNSAINTACSPPVVSPSAAVTSAPTAVKPTAAAGAQTPTTAGMLR
PAPPATTPLASTTPAQTRAGLAPPPRIVAPQLIVRPPQQQTTIQLPPGFTIPPGMVLVRT
ELGQLVLVPQQALAQAQAQSSLXXPTTPTGGAAFRVATPQRAPLAAAVAVTAPQQVPATL
GPQGPHGQPTLAPPSTAGPAPGAPVVSQEMQENVKKCKNFLATLIKLASHNSPSPETSRN
VKALVQDLLDAKIEPEEFTNRLQSELKSSPQPYLVPFLKKSLPALRLSLLNSQQSLVQPP
QAAKTSVSPAGAVAGTVTPGNATRQPNSTPVLPQGIKRAGAVAGQVRMPVVITQTVRAAG
AVGKAPTIQTGRSPTAIGVQLSGTQKNKLNDPGGGSGGGLDDDDINDVASMAGVNLNEES
ARILATNSELVGTQIRSCKDEAFLPTGLLHRRVLEMARKFGVTEVPLETVNYISHATQAR
LRTVLEKVSSIAQHRMDSGKDEDWCEQTSDVRSQLKFFEQLERLEKQRKDEQEREILLRA
AKSRSRLEDPEQARLKQKAKEMQQQELAQMRQRDANLTALAAIGPRKKRKLDSPGATATG
PEVSCGSAGSPASSSVLSASSRQYPRLRITRVNLRDFIFYLEQERETSRSLLLYRALLK
NT seq
2880 nt
NT seq
+upstream
nt +downstream
nt
atggcgggcgcctccgaccctctggaagagatgctgttctccgaggtggacgagaaagcg
gtgagcgacctggtgggctcgttggagtcgcagctcggtggcccgaacagcgcggccgga
gcgcacggtgagagcaggggcggcgcgcacacagccaagcagcacccggggcgcgcgcta
cctgcccgggtaggcaccccatccgaggaccagccacaacaagggcaacatgcagctgcg
aggagccaggacgccaagcctgcacgcatcagcccggacacgcgcgccaagccgccttct
ctgggctccgccgcgtccctcgaggagggctcgacttcagagaccggcgcgagcgcgagc
ggtgtgcagtcacatggaccgtctgccagcagcggggtgtccgacggggtaacttctccg
ccggtcagcatccacgcgggcaacaaaggtgcgaccccgggctccggcgagacgtcgggg
gcatgcgatactcgtccaaaacacctctctccaaccgcgcggagtacgcgcgcggcagcc
cagagtttgaacggggacggcggcgccgtaacgtccaccaactctccaacagaccccgct
gcaaccgacgcgtccgcggcagcggtcttcagcagtgcaacggcaacaacatgtgcaaat
acgacgacttttaccgtatctaacgccggcgcgtccgcgacggccattgcgctggacaga
gggactcctacgatagctttgcgcagacttccgagtcatatcgtggccagcatcgctcag
agcaggaacggcaccgccgtttcggcgctggtacagcaggcagcgcgcacaggagagacg
agtcccgctccacaggtgaaccacgccaggaactgcgacggtgcggaggccaagtcggga
gcgccctccgcttccaaagtagtggttcccggtcagcccgggaccgtgaactcggcgata
aacaccgcgtgctctccgcccgtcgtcagcccgagcgctgccgttacgtctgcgcccacg
gctgtcaaacccaccgctgctgcgggcgctcagacgccaacgacggccgggatgctgagg
cctgcgccccccgctacgacccccctggccagcacgactccagctcagacccgagcgggg
ctggcgcctccgccgaggattgtagctcctcagctcatcgttagacccccacagcagcag
acaacgatccagctgccccctgggtttactatcccaccaggcatggtgttggttcggact
gaactgggccagctggtgctggtgccgcagcaggctctggcccaggcccaggcccagagc
agcctcnntnggcccaccacccctaccggcggcgccgccttccgggtcgcgaccccgcag
agggcgccgttggcagcggctgtagcggtgacggctccccagcaggtccctgccaccctg
ggcccccaggggccacatggtcagcccacgctggcccctcccagcacggctggccctgca
cctggagcgcctgtcgtctcccaggaaatgcaagaaaatgtgaaaaagtgcaagaatttc
ctggcaacgctgattaaattggcatcccataattccccttccccggagacgtctcggaac
gtgaaggcactagtgcaggacctgctggatgccaaaattgaaccggaggagttcaccaac
cgtttgcagtcggagctgaagtcttcaccgcaaccatacctggtcccttttctgaagaaa
agtctgccagctttgcgtctctcgctgttaaacagtcagcagtccctcgttcagcctcct
caggcggctaaaaccagcgtctccccagccggtgcagttgctgggactgtcactccgggc
aacgccacccggcaacccaacagcacccctgtgttgccacagggcattaagagggcaggg
gcagtggcagggcaggtccgtatgccagtggtcatcacccagacggtgcgggcagcaggt
gctgtagggaaggctcccaccatccagacgggcaggagtcccactgccatcggtgttcag
ctctcagggacccagaagaacaaactcaatgaccctgggggaggctcnggtggggggttg
gatgacgatgacatcaacgatgtggcgtccatggctggcgtgaatctgaacgaggagagc
gcgcgcatactggccactaactcagagctggtcggaacgcagatccggtcctgtaaggac
gaagccttcctgcccacaggactactgcaccgccgcgtcctggagatggccaggaagttt
ggggtgacggaggtgcctctggagacggtgaactacatctcccacgccacgcaggcgcgt
ctgcggaccgtgctagagaaggtctcctccatcgctcagcaccgcatggactccggcaag
gatgaggactggtgtgaacagacctcagatgttcgctcccagctgaagttctttgagcag
ctcgaacggttggagaagcaacggaaggacgaacaggagagagagattctcctcagagcg
gccaaaagtcgctcaaggctggaggaccctgagcaggcgcgcttgaagcagaaggctaag
gagatgcagcagcaggaactggcacagatgaggcagcgagacgccaacctgacggcgctg
gccgccattggcccccgcaagaaacgcaagctggactcacccggcgccacggcgactggc
cccgaggtgtcgtgtggctccgccggctcgccagcgtcctcgtctgtgctgtcggcgtct
tcacgccagtaccctcgtctgcgaatcacccgggtgaacctcagggacttcatcttctac
ctggagcaagagcgggagaccagccgctctctactgctctaccgcgctctgttgaagtag
DBGET
integrated database retrieval system
