Electrophorus electricus (electric eel): 113585029
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Entry
113585029 CDS
T05787
Symbol
vps8
Name
(RefSeq) vacuolar protein sorting-associated protein 8 homolog isoform X1
KO
K20178
vacuolar protein sorting-associated protein 8
Organism
eee
Electrophorus electricus (electric eel)
Pathway
eee04148
Efferocytosis
Brite
KEGG Orthology (KO) [BR:
eee00001
]
09140 Cellular Processes
09141 Transport and catabolism
04148 Efferocytosis
113585029 (vps8)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
eee04131
]
113585029 (vps8)
Membrane trafficking [BR:
eee04131
]
Endosome - Lysosome transport
Tethering complex
CORVET complex
113585029 (vps8)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Beta-prop_VPS8
TPR_Vps8
zf_RING_Vps8
VPS8_N
TPR_Vps41
TPR_VPS8_2
WD40_CDC20-Fz
Clathrin
zf-RING_Vps41
zf-RING_5
zf-RING_UBOX
zf-RING_2
zf_RING_Vps8_fungal
zf-RING_11
DUF5771
EIF3I
zf-C3H2C3
ANAPC4_WD40
Beta-prop_HPS5
Motif
Other DBs
NCBI-GeneID:
113585029
NCBI-ProteinID:
XP_026878110
LinkDB
All DBs
Position
Unknown
AA seq
1439 aa
AA seq
DB search
MMSESPDTRSLVSASSQLNLTEIEAIDDKEFDIPQVDTPPTLESILNEPEEEDEPFVLED
TCLLNTENIDAHSCETSSLASSDSGDRAHLKRCKANACTHEHERACTHTRRKAIETNATV
HGSVLRHSTLKGVSAQIVSAAEKVDAGLPTAITVSGVIAVGTSHGLALVFGKDQNQALRL
CLGTTAMGAEYGAVSALSINRDCTRLLCGFAKGQITMWDLANGKLLRTITDAHPPGTAIL
HVEFTDLPTLAVCNDSGGSVFELSFRRVMGMRTCESRCLFSGSKGEVCCVEPLHAAAELK
DHPITPYCLLAMASLTKILVIGLKPSLKVWMTFPYGRTDPASVPVLAWQFAAVQKAVNPV
VAFCRGDTVHFLLVKKDESGTIHVIKQRQLQLSCDLISLTWLNSRTLVLMDSSEKLHVLD
RPSQDELETLDLHEVQLVYNSSHFKSLATGGNVSQALALVGERACYQSVCSYAGQIFYLG
TKSVHVMTLRSWRERVEHFLKQERFTEALSLAWSFHEGTAKAVLGLFGDPVKRKAVVADK
MVEILFQYVERSLKKCPEQGKIQVLEQHFQDMVPVVVDYCLLLQRTDLLFNQIYSRLLEN
PVARGVFLESLEPYILSERIGCLTAPVMRDLLSYFQENGMMESVEGCLVHMDITNLDIQQ
VVRMCWDNQLYDAMIYVFNSGMNDYISPMEKLFQVIGPPLQEGKPLTDEQVIMGNKLLVY
ISCSLAGRAYPLGDIPEDLVPQVKNQVFEFLIRLHTVESTLEEEVHPYIRTLLHFDTREF
LNVLALTFEDFKNDKQALEYQQRIVDILLKVMVDNSDFTPSQVGCLFTFLARQLAKPDNT
LFVNRKLFDQVLEFLCSPDDDTRHTERQQVLLELLQVGGVVQFDQGRLLALAEKAEFYQI
CEFMYEQKHLYDRIIDCYLKDPLRKEEIYNYVHNILSLPGYSPKDKQTARRKALEHVKEL
VRINPAKTAELVASHFGGEVECIITALQDDYLVFQLLKNLLDPSEGPNPQAVLTLRPDLH
ELLVGLLCRFCPRQVTPFLQTSQHYRLEETIEITKKHDLREATSYLLEKKGDVQGAFQVL
LQTLKTKLHTLTQENPELARPRSEDEDAEEADDDQTPLSVVEEALIDLIQLCHRNSHGLN
QQQREALWFPLLEAMMSPQKLLKGPSAKHTSEALKELTMKVLNSMSSFIALPAIIQRILQ
DPVYGKGKLAEIQGLILGMLETFNYEQTLLETTTSLLNSDLHWSLAHLRKAVSRGLHPRQ
DHCNICLQQYKRRQESEEEIIIFSCGHLYHCQCLQRKEQGVMGKEPGLMGDGVHSWSCYK
CTSRQGTRPADRVSVVGGRMRATSLAQTKVTSAYRGADTEAHGRKDLAEVTLDSQQIQAW
DQLRCMYRGPSRLAILTDIGHSHSSEKAGLLNTAHPPTGSIYHSENFSLKLSPPPVVEE
NT seq
4320 nt
NT seq
+upstream
nt +downstream
nt
atgatgtccgagtctccagacactcgcagtctcgtctctgcgtcctcgcagctcaatctg
acggaaatagaggcgattgacgataaagaatttgacattcctcaagttgacacaccacca
actctagaaagtattctgaacgagcccgaggaggaggatgagccctttgtcctggaggac
acatgtctgctgaacacggagaacattgacgcgcattcctgtgagacttcctctcttgcc
agctccgacagtggagaccgcgcccacctgaagaggtgcaaagcaaacgcatgcacgcac
gaacatgaacgcgcgtgcactcatacgaggaggaaagccatagagactaatgctactgtc
catggctccgttttgagacacagcacactgaaaggtgtctcagcccagatcgtctctgcc
gctgagaaagtcgacgcagggttgcccacagcaatcacggtgtccggtgttatcgctgtg
gggacatcacatggcttggccctggtttttggaaaagaccagaaccaggcgctgagactg
tgtttgggtaccacggcgatgggagcggagtatggcgcggtgtcggctctcagtattaac
cgcgactgtacacgactgctgtgtggctttgctaagggacagatcaccatgtgggatctg
gccaatggcaagctgttacgcaccatcacagacgcacatcctcccgggacggccattttg
cacgtcgagttcacagatctgccaacgctggccgtatgtaatgacagtggcggctcagtc
tttgagctctccttcaggagagtgatggggatgcggacgtgtgagtcgcggtgtttgttc
agtggcagtaaaggggaggtgtgctgtgtggagccgctgcacgcagctgctgagcttaaa
gaccatcccatcacaccctactgcctgctggccatggcctcgctcaccaagattctagtg
attggactgaaaccttcactaaaggtctggatgacttttccttatggcaggacagaccct
gccagcgtgccagtgctagcgtggcagtttgcggctgtccagaaagcggtgaaccccgtt
gtggccttctgcagaggggacaccgtccatttcctgctggtgaagaaggatgaatctgga
actatccatgtcatcaaacagcgacagctccagctcagctgtgacctcatcagtctgaca
tggctgaactcacgcactctggtgctgatggacagcagtgagaagctgcacgttctggac
cggcccagccaggatgagctggagaccctggacctgcacgaagtccagcttgtctacaac
agcagccacttcaagtccctggccacgggtggaaacgtcagccaggccctggctctggtg
ggggagagggcgtgttaccagtctgtgtgcagctacgcgggacagatcttctacctagga
accaagtccgtccacgttatgaccctgaggagctggcgtgagcgcgtggagcatttcctg
aagcaggagaggttcacagaggcgctctccttagcctggtccttccatgagggcacggcc
aaagccgtcctgggcctgttcggggaccctgtgaagaggaaggcggtggtagcagacaag
atggtggagatcctgttccagtatgtggagcgttcgctgaagaagtgtcccgagcagggc
aagatccaggtgctggagcagcacttccaggacatggtgcctgtcgtggtagattactgt
cttcttctgcagaggacggacctgctgtttaaccagatctactccagactgctggagaac
ccagtggccaggggcgtgttcctggagagcctggagccgtacattctgagtgagcggatt
ggctgcctgaccgcgcccgtcatgcgggacctgctcagctacttccaggagaacggcatg
atggagagcgtggagggctgtctggtgcacatggacatcaccaacctagacatacagcag
gtggtgcgtatgtgctgggataaccagctgtatgacgccatgatctacgtgttcaacagt
ggcatgaatgactacattagccctatggagaaactctttcaggtgattggtcctcctctg
caagaagggaaacctctcacagatgaacaggtcatcatgggaaataagctccttgtctac
attagctgttctctagctggacgggcctatcctttaggagacattccagaagacctggtt
cctcaagtgaaaaatcaggtattcgagttcctgattcgcttgcatacagtggagagcacc
cttgaagaggaggtgcacccttacatccgcactctcctgcactttgacacgcgcgagttc
cttaacgtcttggcactgacatttgaggactttaagaatgacaaacaggctctggagtac
cagcaaaggattgtggatattttactgaaggtaatggtggacaactcggacttcactccg
tcccaggtgggctgcctattcaccttcctcgcccgccagctagccaagcctgacaacacg
ctcttcgtcaacaggaagctctttgaccaggttctggagtttctgtgcagtccagacgac
gacaccaggcacacggagagacagcaggtgctgctggagttacttcaggtgggaggtgtg
gtccagttcgaccagggacgcctcctcgccctcgcagagaaggcggagttctatcagatc
tgtgagttcatgtatgaacagaaacacctttatgatcgaatcatcgactgctacctcaag
gaccccttaagaaaggaggagatttataactatgtccacaacatcctgtccctgcctgga
tacagcccgaaggacaagcagaccgcgcggaggaaggccctggagcacgttaaggaacta
gtccgcattaacccggcgaagacggccgagctggtggctagtcacttcggcggtgaggtg
gagtgcatcatcacggcactacaggatgattatttggtgttccaactcctgaagaacctg
ctggatccaagtgagggcccaaatccccaggctgtcctgacgctcaggcccgacctccat
gagctcttggtgggcctcctgtgccgcttctgcccccgccaggtcacgcccttccttcag
acctcccagcactaccgcctggaggagaccatcgaaatcaccaagaagcacgacttgcgt
gaggccacttcctacctgctggagaagaagggagacgtgcagggagctttccaagtgctg
ctgcagacgttaaaaacaaagctgcacacactgacccaagagaatcctgaactcgccagg
ccaaggtctgaggatgaggatgctgaagaggcagatgatgatcaaactccattgtccgtg
gtggaggaagccctgattgacctcatccaactgtgtcacaggaactcgcatggccttaac
cagcagcagagagaggctctctggtttccccttctggaggccatgatgtcgccacagaaa
ctccttaaaggccccagtgcgaaacatacttctgaagcactgaaggaactcacaatgaag
gtcttaaacagtatgtccagtttcattgccttgcccgccatcattcagcgcatcttacag
gaccctgtgtatggaaaagggaagttagctgagatccagggcctcatccttggcatgctg
gagactttcaactacgaacagaccctgttagagaccaccaccagtctgctgaactcggac
ctgcactggtctctggcgcacctgcgcaaagcagtcagcagggggctccacccacgacag
gaccactgcaacatctgtctacagcagtacaaacggaggcaggagagtgaagaggaaatc
atcatcttcagctgtggccacttgtaccactgccagtgtctgcagcggaaggagcagggt
gttatgggtaaagagccgggtctgatgggagatggtgttcactcctggagctgttataag
tgcacctccaggcagggaactcggccggcagaccgggtcagtgttgtgggtggcaggatg
cgcgccacctccctcgcacagaccaaggtgacgtccgcctatcggggagccgacaccgag
gctcatgggagaaaggacttggctgaagtgacgttggattcccaacagatacaggcctgg
gaccagctgcgctgcatgtacagaggaccgtccaggttagctatcctcacagatatcggc
cattcccacagcagtgaaaaggcaggtctgctgaacactgcacatccaccaacaggaagc
atctaccacagcgaaaacttcagccttaagctttctcctccaccagtggtggaggagtag
DBGET
integrated database retrieval system
