Electrophorus electricus (electric eel): 113585879
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Entry
113585879 CDS
T05787
Symbol
patl1
Name
(RefSeq) protein PAT1 homolog 1
KO
K12617
DNA topoisomerase 2-associated protein PAT1
Organism
eee
Electrophorus electricus (electric eel)
Pathway
eee03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
eee00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
113585879 (patl1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
eee03019
]
113585879 (patl1)
Messenger RNA biogenesis [BR:
eee03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
113585879 (patl1)
mRNA degradation factors
5'-3' decay
Decapping complex
113585879 (patl1)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PAT1
Motif
Other DBs
NCBI-GeneID:
113585879
NCBI-ProteinID:
XP_026879444
UniProt:
A0A4W4GSS1
LinkDB
All DBs
Position
Unknown
AA seq
774 aa
AA seq
DB search
MFRFQSFDDDCTLEEEGLVEEEDEIDQFNDDTFGAGAIDDDWQEEHARLAELDERGRDGL
LGVADGSSSTACPPPVENVPLPSSLPPPSSSSPPPPALEEKAGGDLVESLARLILDSDPA
IAGVGAPEPDRTRLPAVPPSQTLHPALIGMPPSLLSYQQQQHLLHRGTAPLQKMSSHSIW
DSSVGFGPVSVTPGLVTHMEDSPLLSIIKEVGLPKRTPPVSREEGRDLSERVPPPRSSSP
VIGSPPVRAVPIGTPPKQPMGHAINQQIPHPVAVHVRAPVQHRYPPPFPERLSPNTLLNI
ANSPLCRPPFPAGVGPVLSQIQRAQLLNSQVGPFSRGPGPAPPMLAGSGAGFRPFFGQPP
PRVGPHVPHVPPPNHTPIRHNTTHLHPQHRRMLTQRMQSRGERSGVRVSGDRRSRDPYSN
LMTQKEKDWVARIQMMQLQSTDPYLDDYYYQNYYEKMEKRQEQDRDRSRKEHTTKLITPQ
VAKVEHTYRPVQFAGSLGKLTVSSVNNPRKMIDAVVTTRTDDEEKREKQVWNKRRQILYT
VEKMYTLLLEVQDFEKKFLQTPEEQREALLELHKTHTLQLYSSLREKEWDNRVSDEQCLM
IMSVRKGKRLISRLLPFLPSPQAAAVVMGIARNLPALAKKDKQDQVLCWLVEPVAVVIQS
MSSSALTDLLQELQGSEGQFPRVLQNKFGVTLLYLILSEGERMQSSDPKCQLMDDNRWTE
LVFSVTRELLKVPSSSLSPPLFTPPNLLSLFSRYVDRQRLELLQEKLQITAMSR
NT seq
2325 nt
NT seq
+upstream
nt +downstream
nt
atgttccgttttcagtcctttgatgatgactgcaccctggaggaggaggggctggtagag
gaggaagatgaaatcgatcagtttaacgatgatacttttggggctggagcgatcgatgat
gactggcaggaggagcatgctcggctggcagagctggacgagcgagggcgtgatgggctg
ctgggcgtggctgatggctcctcttccactgcctgcccccctccggtggaaaacgttcct
ctcccttcctcgctccccccgccctcttcttcctcgcctcctccaccagctttagaggag
aaggctggcggcgatctggtggagtcgctggctcgcctaattctggactctgatcctgcg
attgctggagtgggcgctcctgagccagacaggactcgcctccctgcagtgcctcccagt
cagacgctgcacccagcattgattggcatgcccccctcgctgctaagctaccagcaacag
caacatctgctgcatagagggacagcaccactacagaagatgagttctcacagtatttgg
gacagcagtgtaggctttggtcctgttagtgttacccctggactggttactcacatggag
gactctcctctgctatccattatcaaagaggtagggcttccaaaacggacacctccagtc
agcagggaggagggccgggacttgtctgaaagagttccacctcctcgttcctcctcacct
gttattggaagtccacctgtaagggcggtacccattggaacccctcccaaacagcccatg
ggccatgccataaatcagcagatcccccatcctgttgctgtgcatgtgagggctcctgta
cagcaccgttacccccctcctttccctgaacgcctctcccccaacactctcctcaacatc
gctaactctccgctgtgtcgtcctccatttcctgctggtgttgggccagttctgtctcag
atacagagagcccagttgctcaactctcaggtgggtcctttctcgagaggtcctggtccg
gcacccccgatgttggcaggcagtggtgcgggttttaggccattttttgggcagcctccc
cctagagtgggcccccatgtgccacatgtcccacctcctaaccacacccccattcgccac
aacacaacccatctccaccctcagcaccgcaggatgcttacccagaggatgcagagccga
ggggaacgtagtggggtcagagtgtcaggggacaggagaagcagagacccctacagtaac
cttatgactcagaaagagaaggactgggtggctcgcattcaaatgatgcaactgcagagc
acagacccttacctggatgactattactaccagaattattatgagaagatggagaaacgt
caagagcaggaccgagaccgcagcaggaaagagcacaccaccaaactcatcacccctcag
gtggccaaagtagagcacacctaccgaccagtccagtttgctggttccctgggtaaactc
accgtctccagtgtgaacaaccctaggaaaatgattgatgcagtggttactactcgcact
gatgatgaggagaagagggagaaacaggtgtggaacaagagacgacaaatcctttacact
gtggagaagatgtacactctgctactagaggtgcaggactttgagaagaaattcctacag
acccctgaggagcagagagaggcactactagagctacacaagacccacacgctgcagctc
tacagctcactgcgggagaaagagtgggacaaccgagtaagtgatgagcagtgtctgatg
attatgtcggtgcgtaaggggaaacggctcatctctaggctcctccccttcttgccgtca
ccccaagctgctgctgttgtcatgggaattgcgcgtaaccttccagccttggccaagaag
gacaagcaagatcaggtcctttgctggttggtggagccggtcgctgtagtaatccaatcc
atgtctagctctgccctcactgatctactgcaagagctgcagggcagcgagggccagttt
ccccgcgtgctgcaaaataagtttggtgtgacgctgctttacctgatcctgagtgagggg
gaaagaatgcagagctctgatcccaaatgccagctcatggatgacaatcgctggacagag
ttggtgttttcggtgacgagggagctgttgaaggtcccgtcctcctcgctttcgcctcct
ctcttcactcctcccaatcttctgtccctcttctctcgatatgtggaccggcagagacta
gagctgctacaagagaagctacagatcactgccatgtccaggtag
DBGET
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