KEGG   Electrophorus electricus (electric eel): 113585879
Entry
113585879         CDS       T05787                                 
Symbol
patl1
Name
(RefSeq) protein PAT1 homolog 1
  KO
K12617  DNA topoisomerase 2-associated protein PAT1
Organism
eee  Electrophorus electricus (electric eel)
Pathway
eee03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:eee00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    113585879 (patl1)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:eee03019]
    113585879 (patl1)
Messenger RNA biogenesis [BR:eee03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   mRNA cycle factors
    P-body specific factors
     113585879 (patl1)
  mRNA degradation factors
   5'-3' decay
    Decapping complex
     113585879 (patl1)
SSDB
Motif
Pfam: PAT1
Other DBs
NCBI-GeneID: 113585879
NCBI-ProteinID: XP_026879444
UniProt: A0A4W4GSS1
LinkDB
Position
Unknown
AA seq 774 aa
MFRFQSFDDDCTLEEEGLVEEEDEIDQFNDDTFGAGAIDDDWQEEHARLAELDERGRDGL
LGVADGSSSTACPPPVENVPLPSSLPPPSSSSPPPPALEEKAGGDLVESLARLILDSDPA
IAGVGAPEPDRTRLPAVPPSQTLHPALIGMPPSLLSYQQQQHLLHRGTAPLQKMSSHSIW
DSSVGFGPVSVTPGLVTHMEDSPLLSIIKEVGLPKRTPPVSREEGRDLSERVPPPRSSSP
VIGSPPVRAVPIGTPPKQPMGHAINQQIPHPVAVHVRAPVQHRYPPPFPERLSPNTLLNI
ANSPLCRPPFPAGVGPVLSQIQRAQLLNSQVGPFSRGPGPAPPMLAGSGAGFRPFFGQPP
PRVGPHVPHVPPPNHTPIRHNTTHLHPQHRRMLTQRMQSRGERSGVRVSGDRRSRDPYSN
LMTQKEKDWVARIQMMQLQSTDPYLDDYYYQNYYEKMEKRQEQDRDRSRKEHTTKLITPQ
VAKVEHTYRPVQFAGSLGKLTVSSVNNPRKMIDAVVTTRTDDEEKREKQVWNKRRQILYT
VEKMYTLLLEVQDFEKKFLQTPEEQREALLELHKTHTLQLYSSLREKEWDNRVSDEQCLM
IMSVRKGKRLISRLLPFLPSPQAAAVVMGIARNLPALAKKDKQDQVLCWLVEPVAVVIQS
MSSSALTDLLQELQGSEGQFPRVLQNKFGVTLLYLILSEGERMQSSDPKCQLMDDNRWTE
LVFSVTRELLKVPSSSLSPPLFTPPNLLSLFSRYVDRQRLELLQEKLQITAMSR
NT seq 2325 nt   +upstreamnt  +downstreamnt
atgttccgttttcagtcctttgatgatgactgcaccctggaggaggaggggctggtagag
gaggaagatgaaatcgatcagtttaacgatgatacttttggggctggagcgatcgatgat
gactggcaggaggagcatgctcggctggcagagctggacgagcgagggcgtgatgggctg
ctgggcgtggctgatggctcctcttccactgcctgcccccctccggtggaaaacgttcct
ctcccttcctcgctccccccgccctcttcttcctcgcctcctccaccagctttagaggag
aaggctggcggcgatctggtggagtcgctggctcgcctaattctggactctgatcctgcg
attgctggagtgggcgctcctgagccagacaggactcgcctccctgcagtgcctcccagt
cagacgctgcacccagcattgattggcatgcccccctcgctgctaagctaccagcaacag
caacatctgctgcatagagggacagcaccactacagaagatgagttctcacagtatttgg
gacagcagtgtaggctttggtcctgttagtgttacccctggactggttactcacatggag
gactctcctctgctatccattatcaaagaggtagggcttccaaaacggacacctccagtc
agcagggaggagggccgggacttgtctgaaagagttccacctcctcgttcctcctcacct
gttattggaagtccacctgtaagggcggtacccattggaacccctcccaaacagcccatg
ggccatgccataaatcagcagatcccccatcctgttgctgtgcatgtgagggctcctgta
cagcaccgttacccccctcctttccctgaacgcctctcccccaacactctcctcaacatc
gctaactctccgctgtgtcgtcctccatttcctgctggtgttgggccagttctgtctcag
atacagagagcccagttgctcaactctcaggtgggtcctttctcgagaggtcctggtccg
gcacccccgatgttggcaggcagtggtgcgggttttaggccattttttgggcagcctccc
cctagagtgggcccccatgtgccacatgtcccacctcctaaccacacccccattcgccac
aacacaacccatctccaccctcagcaccgcaggatgcttacccagaggatgcagagccga
ggggaacgtagtggggtcagagtgtcaggggacaggagaagcagagacccctacagtaac
cttatgactcagaaagagaaggactgggtggctcgcattcaaatgatgcaactgcagagc
acagacccttacctggatgactattactaccagaattattatgagaagatggagaaacgt
caagagcaggaccgagaccgcagcaggaaagagcacaccaccaaactcatcacccctcag
gtggccaaagtagagcacacctaccgaccagtccagtttgctggttccctgggtaaactc
accgtctccagtgtgaacaaccctaggaaaatgattgatgcagtggttactactcgcact
gatgatgaggagaagagggagaaacaggtgtggaacaagagacgacaaatcctttacact
gtggagaagatgtacactctgctactagaggtgcaggactttgagaagaaattcctacag
acccctgaggagcagagagaggcactactagagctacacaagacccacacgctgcagctc
tacagctcactgcgggagaaagagtgggacaaccgagtaagtgatgagcagtgtctgatg
attatgtcggtgcgtaaggggaaacggctcatctctaggctcctccccttcttgccgtca
ccccaagctgctgctgttgtcatgggaattgcgcgtaaccttccagccttggccaagaag
gacaagcaagatcaggtcctttgctggttggtggagccggtcgctgtagtaatccaatcc
atgtctagctctgccctcactgatctactgcaagagctgcagggcagcgagggccagttt
ccccgcgtgctgcaaaataagtttggtgtgacgctgctttacctgatcctgagtgagggg
gaaagaatgcagagctctgatcccaaatgccagctcatggatgacaatcgctggacagag
ttggtgttttcggtgacgagggagctgttgaaggtcccgtcctcctcgctttcgcctcct
ctcttcactcctcccaatcttctgtccctcttctctcgatatgtggaccggcagagacta
gagctgctacaagagaagctacagatcactgccatgtccaggtag

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