Electrophorus electricus (electric eel): 113586362
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Entry
113586362 CDS
T05787
Symbol
col4a2
Name
(RefSeq) collagen alpha-2(IV) chain isoform X1
KO
K06237
collagen type IV alpha
Organism
eee
Electrophorus electricus (electric eel)
Pathway
eee04510
Focal adhesion
eee04512
ECM-receptor interaction
eee04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
eee00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
113586362 (col4a2)
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
113586362 (col4a2)
09142 Cell motility
04820 Cytoskeleton in muscle cells
113586362 (col4a2)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
eee04147
]
113586362 (col4a2)
00536 Glycosaminoglycan binding proteins [BR:
eee00536
]
113586362 (col4a2)
Exosome [BR:
eee04147
]
Exosomal proteins
Exosomal proteins of other cancer cells
113586362 (col4a2)
Glycosaminoglycan binding proteins [BR:
eee00536
]
Heparan sulfate / Heparin
Extracellular matrix molecules
113586362 (col4a2)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Collagen
C4
Motif
Other DBs
NCBI-GeneID:
113586362
NCBI-ProteinID:
XP_026880210
LinkDB
All DBs
Position
Unknown
AA seq
1678 aa
AA seq
DB search
MKFEVRMEGLALLQRRRIIKTVRLLFICLTVLILTSEVNAGGKKSSGPCGGRDCSGGCQC
YPEKGARGQPGPLGPQGHRGPPGRPGEHGLQGHIGQKGDAGTPGNTGPKGSVGMTGVPGF
SGTDGIPGHPGQPGSRGKPGADGCNGTHGDPGTPGRYGHDGRHGVEGEPGRKGEKGDNLD
ISVYMERFRGDPGHPGFPGDPGPPGQPGYPGRIGLHGPKGSKGLPGPQGPKGSPPLVLKG
EKGQTGESGEPGPPGNSTEQYQGPPKPGQKGQKGVKGEAGVQGYLSTKAEAGLPGFTGER
GSPGRDGRTGPKGDAGLPGVPAPPSRKGEPGEPGDLIDTPPGWTGAGPPGPIGERGLPGS
SGPLGPKGPPGPPGPSAKEQQSDWFGPKGSDGLKGHKGEVGEPGIPATHPGPPGFDGQQG
IIGPPGPKGTCDELCEGPKGTRGRPGSAGAKGQKGEHGLCECREVHSPPGPPGEAGLPGQ
PGMAGEWGQQGDQGDPGHSGVTGLPGFPGPVGKPGDKGAKGEGKEVTEKGTSGDPGDPGF
RGEQGDQGGPGLSGENGVPGVSGLPGVGPVGEPGQRGFPGRRGLPGLVGQRGEPGRVIAA
LKGVKGLPGDPGISGYDGNPGLPGIPGDCNPREDGDDWSGEGDCEVVPGPPGERGHPGSA
GLEGLPGVPGPKGVTGSHGGLGLKGEQGDVGRAGSPGVTGFPGPRGDLGSPGIKGSTGAH
GDPGLPGVHGEPGLKGANGDALGASPGPQGDPGLPGAQGLKGLSGEPGPFGYPGVRGMPG
LIGSKGEVGPPGLQGETGRPGPPGTLGYPGVPGHEGPLGPPGEPGLPGPKGRTGDPGNLG
LPGPMGLKGERGGPGSDAGPGDLGPRGDPGKPGHIGRTGLTGLKGLRGSQGMTGFPGMLG
HRGVEGLPGQKGQQGVGGPKGEKGDLGTQGPKGERGLMGPAGVIPMDEVKYMMTIMKGAK
GNHGNEGHPGFPGERGLKGYPGTPGQEGFHGLPGAPSYEKGQRGPPGAEGSLGHKGMPGP
TGPPGISGFPGMAGTTGEKGSPGSYGATGGTGFKGIKGDYGDIIDLPGATGHRGSPGLLG
PAGTKGLQGEPGDRGPEGFDGIDGMKGSQGEPGQKGAVGPDGLQGPTGDRGLKGWSGVSG
EAGSHGKQGYLGQKGFVGLPGIFGLDGLKGQKGLPGVPGADTWGSPGEPGGKGEKGEDGI
PSTEIGVPGFHGHKGSAGDIGQEGEPGPPGPPGPPGEEGFPGLQGVPGDPGPHGQKGLPG
YPGATGLPGFPSQSGAKGDRGIPGETGIRGPNGLQGDIGENGPAGPSGVSARKGAKGEQG
MMGYPGRAGFKGEIGNVGSKGDTGPPGFPGAPGAKGLPPVPLHMEGEKGPPGPYGIHGPQ
GEKGVVGPVGHTGDPGYVGPQGDKGMPGLPGTPGTPGFHGDVGPMGHPGIQGLEGSRGHP
GTPGHPGMPGRSVSVGYLLVKHSQSDQTPMCPVGMSKLWDGYSLLYFEGQEKAHNQDLGL
AGSCLPRFNTMPFLYCNPGDICYYASRNDKSYWLSTTAPIPMMPVEEAEIKPYISRCSVC
EAPSVAIAVHSQDITIPQCPAGWRSLWIGYSFLMHTAAGDEGGGQSLVSPGSCLEDFRTT
PFVECNGAKGTCHYFANKHSFWLTSIDQSFHTHPEAETLKAGQLLSRISRCQVCMKNL
NT seq
5037 nt
NT seq
+upstream
nt +downstream
nt
atgaagtttgaagtacggatggagggactggcactcctacagcgccggagaatcattaag
actgtgaggcttctgtttatttgcctcaccgtgctcatcctaacatcagaggttaacgcg
ggcggcaagaagtccagcgggccatgcgggggtcgagactgcagcggcgggtgtcagtgt
taccctgagaagggggccaggggtcagccaggtcctcttgggccccagggccacagaggg
cccccaggacgcccaggcgaacacggcctgcaaggccatataggacagaagggagacgca
ggcacgccagggaacacagggcctaaaggatctgtgggaatgacaggagttccagggttt
tcaggaacagatggcattccaggacacccgggacagccaggctctcggggaaaaccaggt
gctgacggctgtaacggaacccatggagatcctggaacgccgggccgctacggacacgac
ggcagacacggagtggagggtgaaccaggcaggaagggtgagaagggagacaacctggac
atttctgtctacatggagagatttcggggagatccaggacatccaggatttccaggagac
cctggccctcctggacagccaggttatccaggaaggattggacttcatggtcctaaagga
tcaaagggacttcctggaccccaaggaccaaagggcagtccccctctggtcttgaaagga
gaaaaaggacaaactggggagagtggagaaccagggccaccaggaaactctactgagcaa
taccaaggaccgcctaaaccgggtcagaagggtcagaagggcgtgaagggtgaagcagga
gtacaggggtatctgtccaccaaagcagaggcaggacttccaggctttacaggggaacgg
ggaagccctggacgagacgggagaacaggacctaagggagatgcgggtttgccgggtgtc
ccagcaccgccgagccgtaagggggagccgggagagccgggagatctgatcgatacgccg
ccgggctggactggagcaggtcctccaggccctataggggaacgtggactaccagggagt
tctggccccctggggcctaaaggacccccaggtcccccggggcccagtgctaaggaacag
caatcagattggttcggacctaaaggatctgatggactgaagggtcataagggagaagtt
ggggagcctggaattccagccacacatcctgggcctcctggcttcgatgggcaacaagga
ataattggacctcctggacccaagggaacatgtgatgagctctgtgaaggccctaaagga
acacgcggtcgaccgggaagcgcaggtgcaaaaggtcagaaaggcgagcacggtctgtgt
gaatgcagagaggtccactccccaccgggaccccctggtgaagcagggcttcccgggcag
cccggcatggcgggcgagtggggtcagcaaggtgaccagggcgacccaggacactcgggc
gtcaccgggctgccgggttttccaggacctgtggggaagcctggagataagggtgccaaa
ggagaaggaaaggaagttacagagaaaggtacatcaggggatccaggagatccaggtttt
cgtggggaacagggcgaccaaggcggacctgggctaagcggggaaaacggggttcctgga
gtttctgggctacccggtgtcggaccagttggtgagcctgggcagaggggcttcccaggc
agacgcggcttgccagggttggtcggacagcgtggagaacctggccgtgtgatcgcagcg
ctcaaaggtgtaaagggccttcctggcgatccaggcataagcggttatgacggaaatcca
ggcctgccgggaatcccaggggactgtaacccaagagaggacggagacgattggagtgga
gaaggggactgtgaggtagtccctggaccaccaggagagaggggccaccctggatctgct
ggactggaaggactcccaggagttcctggtcctaagggggtcacaggatcacacggaggg
ttggggcttaaaggagagcaaggagacgtgggtagagcagggtcaccaggagtaacaggt
tttcctggacctcgtggcgacctgggcagtcctggcattaaaggctccacgggggctcat
ggagatccaggcttgccaggggtgcacggggagccgggtcttaagggtgccaatggcgat
gcccttggagcgtctcctggacctcaaggagacccaggtttgccaggtgcccaagggtta
aaaggtctgtctggagagcctggaccgttcggctacccaggtgtgagggggatgcctggg
ctgatcgggagcaaaggtgaagtaggacctccgggcttacaaggagaaacaggaagaccc
ggacctccaggaacgttgggctaccctggggtgcctggtcatgaaggaccccttggaccc
ccaggagaacctgggcttccaggtcctaagggaagaacaggtgatccggggaatcttggt
ctcccagggcccatgggcctgaagggtgagaggggaggtcctggaagcgatgctggccca
ggggaccttggaccccggggagatccaggaaaacctggacatatcgggagaactggtctt
actggacttaaaggactccgaggctctcagggcatgactggcttcccaggaatgttagga
caccgcggtgtagagggccttccagggcagaaagggcagcaaggtgtaggaggcccaaaa
ggagagaaaggagacctgggcacccaaggcccaaaaggtgaacgggggctcatgggccct
gcaggtgtgattcctatggatgaagtgaaatatatgatgacgatcatgaaaggagcaaag
ggtaaccatggaaacgaaggacatccaggattccctggggaacgaggtttgaaaggttac
ccagggactccaggacaagaagggttccatggtctaccaggagctccaagctatgaaaag
ggtcaaagaggacctcctggcgctgagggatctcttgggcacaagggaatgccgggccct
acaggacctccaggaatttctggctttccgggaatggctggaaccacgggagaaaaggga
tcacctggttcttatggagcaacaggaggtaccggatttaagggaatcaaaggtgactat
ggggacattatagacctgcctggagccacagggcatagaggatctcctggactgcttggt
cctgcaggtactaaaggtttacaaggtgagcctggagacagagggcctgagggttttgat
ggcattgatggaatgaaagggtctcaaggtgaacctggacaaaagggggcagtaggtcca
gatggactacagggtcccacaggagaccggggtcttaaaggttggtctggagtgtctgga
gaagccgggtcccatggtaaacaaggatatctcggacaaaaaggatttgttgggctccca
gggatttttggactggatggtcttaaaggccaaaaaggcctcccgggtgttccaggtgcc
gacacctgggggtcaccaggtgaacctggaggaaaaggtgaaaaaggtgaggatggtatt
cccagcacggaaattggtgtcccaggatttcatggtcataaggggtcagcaggagatata
ggacaggagggtgaaccaggacctccagggcctccagggcctccaggggaagaagggttc
ccaggacttcagggagtacctggtgacccaggcccacatggccagaaaggtctcccaggt
tatcctggagccactggccttccaggttttccatctcaatctggagccaaaggagatcga
ggtattccaggggaaactggtatcagaggaccaaatgggttgcagggagacataggagag
aacggtccggctgggccttctggggtgtcggcaagaaaaggtgcaaaaggagagcaagga
atgatgggatatccaggaagggctggtttcaaaggtgaaataggcaatgttggatctaaa
ggagacactggaccaccaggtttccctggtgcccctggcgctaagggactcccaccagtt
cctctgcatatggaaggggaaaaaggcccccctggtccttatggtattcatggaccacaa
ggagagaaaggggtggtgggtccagtgggtcacactggagatccagggtacgtgggaccc
caaggagacaagggtatgccagggcttcctggaaccccaggaaccccaggtttccatgga
gatgttgggccaatgggtcacccaggaatccaaggattagaaggtagtcgtgggcatcct
ggcactcccggtcaccctggtatgcctggtcgtagtgtcagcgttgggtacctgctggtg
aaacacagccagtctgaccagacccccatgtgtcctgtgggaatgtcaaagctgtgggat
ggctacagtctgctgtactttgaagggcaagaaaaggctcataaccaggacctgggtctt
gcagggtcctgtcttcctcgattcaacaccatgccattcctatactgcaatccaggtgac
atatgctactatgctagccgcaatgacaaatcctattggctctccacaactgcccctatt
cccatgatgcctgtggaggaggcagaaatcaagccatacatcagccgctgttccgtgtgc
gaggctccgtcagtggctatagctgtgcacagtcaggatataacaatcccacagtgccct
gcaggttggagaagtctttggattggctactcatttctcatgcatacggcagctggagac
gagggaggcggccagtcgctggtgtctccaggctcgtgtctggaggatttccgcacaact
cccttcgttgagtgtaatggggccaagggcacctgtcactactttgccaataagcacagt
ttctggctgacgtccattgaccagtccttccacactcaccctgaggcggagactctcaaa
gctgggcaactcctgtcacgcatcagccgctgccaagtttgcatgaagaacctgtga
DBGET
integrated database retrieval system
