Electrophorus electricus (electric eel): 113586393
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Entry
113586393 CDS
T05787
Symbol
dhx16
Name
(RefSeq) pre-mRNA-splicing factor ATP-dependent RNA helicase DHX16 isoform X1
KO
K12813
pre-mRNA-splicing factor ATP-dependent RNA helicase DHX16 [EC:
5.6.2.6
]
Organism
eee
Electrophorus electricus (electric eel)
Pathway
eee03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
eee00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
113586393 (dhx16)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
eee03041
]
113586393 (dhx16)
Enzymes [BR:
eee01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
113586393 (dhx16)
Spliceosome [BR:
eee03041
]
Complex B
U4/U6.U5 tri-snRNP components
U4/U6.U5 tri-snRNP related factors
113586393 (dhx16)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
OB_NTP_bind
HA2_C
Helicase_C
WHD_HA2
DEAD
AAA_22
PWI
AAA_19
Cas3-like_C_2
AAA_30
Flavi_DEAD
nSTAND3
Motif
Other DBs
NCBI-GeneID:
113586393
NCBI-ProteinID:
XP_026880270
LinkDB
All DBs
Position
Unknown
AA seq
1064 aa
AA seq
DB search
MLICSLAVKMANLEQWVSDRLHDILGLSDRYVAQFMIGLVKKSSGPQDFVVRLQQTGTID
IDQRITAFAQELYNKVPKKQVIEKPARAIERQAIEMERKNKTYTLLEDSDCDEETPREMG
KEKKSKEKDRGKKRKHLRQKRDESPSSSEDDRKNRTKAASPEPKKAVKEEEEEEEWEKEE
RERLQDLEERDAFAERVKKRDKENTRHILERNDKKAYEEAQKRLKMAEDDQKKMLPELRK
QSRWAYLAKREEEKLEDLEAEIVDEEYLFSNEKLTEHERKELEYKKQIRDLAQDYKKAGA
REKEERKNRYYMPEEVRSKTIPQRDMELEFDEAPREGGGEQGRWEEARVATATLQFGARE
ERERRLKEEKEKYQLVLEEEEMINFVSTAITMKGTLSEKESEPELSQAEKEMLSIQEVRR
SLPVFPYREDLLSAIRDHQILVIEGETGSGKTTQIPQYLKEDGYTRGGMKIGCTQPRRVA
AMSVAARVAQEMGVKLGNEVGYSIRFEDCTSERTVLKYMTDGMLLREFLTEPDLASYSVI
IIDEAHERTLHTDILFGLIKDIARFRPDLKVLVASATLDTERFSCFFDDAPVFRIPGRRF
PVDIYYTKAPEADYLEACVVSVLQIHVTQPAGDILVFLTGQEEIEACCELLQERCRRLGS
KIAELIVLPIYANLPSDMQAKIFNPTPPGARKVVVATNIAETSLTIDGIIYVIDPGFCKQ
KSYNARTGMESLIVTPCSRASANQRAGRAGRVAAGKCFRLYTAWAFKHEMEETTVPEIQR
TNLGNVVLLLKSLGINDLIHFDFMDPPPHETLVLALEQLYALGALNHLGELTKMGRRMAE
LPVDPMLSKMILASEQYKCSEEVLTIAAMLSVNNSIFYRPKDKVVHADNARMNFVVPGGD
HLVLLNVYTQWVESGYSTQWCYENFIQYRSMKRARDVREQLEGLMDRIEVELCSANDDSI
PIRKAITAGYFYHTARLSKGGYKTVKHQQTVYVHPNSSLFEEQPRWIIYHELVFTTKEFM
RQVIEIDSGWLLEVAPHYYKSKELEDGSSKKMPRKQGKAREELG
NT seq
3195 nt
NT seq
+upstream
nt +downstream
nt
atgctaatctgctctcttgccgtcaaaatggcaaatctggagcagtgggttagtgaccgg
ctccatgacatcttggggctgagcgatagatatgtggcccaattcatgatcggcctggta
aagaagtcctctgggccacaggactttgttgttcgtctgcaacagactggaactattgac
attgaccagagaataactgcatttgcccaggagttatacaacaaggttccaaagaaacag
gtcattgagaaaccagcaagagcaatagagcgtcaggctatagagatggagcgaaagaac
aaaacttacactcttctggaggacagtgattgtgatgaagagacacccagagaaatgggg
aaagaaaagaaaagcaaagagaaggacagagggaagaaaaggaagcatctcagacaaaaa
agagatgaaagtccatcatcaagcgaagacgacagaaaaaatcgcaccaaggcagcttca
cctgagccaaagaaagcagtgaaagaggaagaagaggaagaagagtgggaaaaggaggaa
cgagagaggctacaggatctggaagagagggatgcctttgcagaaagagtgaagaagagg
gataaagagaacactaggcacatacttgagaggaatgacaaaaaggcatatgaagaggct
cagaagaggttgaagatggctgaagatgatcaaaagaagatgctgccagagctgcggaaa
cagtcccgctgggcatacctggccaagagagaagaggagaagctggaggacctggaggca
gagatcgtggacgaggagtatctgttctccaacgagaaactcactgaacatgagaggaaa
gaactggagtacaaaaagcagatccgagacctggcgcaagactacaagaaagccggagca
agggagaaagaggagagaaagaaccgttattacatgccagaggaggtcagaagtaagacg
attccccagagagacatggagctggagtttgacgaggccccccgtgaggggggcggggag
caggggcgctgggaggaggcacgcgtcgccacagccaccctgcagttcggggcacgcgag
gagagggagagacgtctgaaagaagagaaagagaagtaccagctagtgctcgaggaagag
gagatgatcaactttgtcagcactgccatcaccatgaaggggacgctctctgagaaggaa
agtgagcccgaactctctcaggctgagaaagagatgctgtccatccaggaggtgagacgt
agcctgccagtgttcccctacagggaggacctcctctctgctatccgagaccaccagatc
ttggtcatcgagggtgagactggttctggcaagaccacccagatccctcagtacctcaaa
gaggatggttacactagaggagggatgaaaatcggctgcacgcaacctcgtcgggtagca
gccatgtctgtggcagcccgagtggctcaagaaatgggagttaaactgggcaatgaggtg
ggctatagcatccgttttgaggactgtacgtctgaacgcaccgtgctgaaatacatgact
gacggtatgctcctcagagagttcctcactgaacctgacctggccagctacagcgtgatc
atcatcgacgaagcgcacgagaggacgctgcacacggacatcctgttcggcctgatcaaa
gacattgcccgcttccggcccgacctcaaggtgctggtggccagcgcaaccctggacaca
gagcgcttctcctgcttctttgatgatgcacccgtcttccgcatcccgggccgccgtttt
cccgtcgacatctattacaccaaggctccagaggccgattatctagaggcgtgtgtggta
tcggtcctgcagatccacgtcacgcaacccgctggtgacatcctcgtgttcctgacggga
caggaggagattgaggcatgttgcgagctgctgcaggagaggtgtagacggctcggttcg
aagattgctgagctcatcgtcctccccatctatgccaacctgccctctgacatgcaggcc
aagatttttaaccccacacctcccggagcacgcaaggttgtcgtagcaacaaacatagcg
gaaacttcgctcaccattgatggcatcatctacgtgatcgacccaggcttctgcaagcag
aagagctacaatgcccgcacaggcatggagtcactcattgtgacgccgtgctcacgggcc
tcggccaatcagcgggcagggcgggcgggccgcgtggctgctggaaaatgctttaggctc
tacacggcctgggcctttaagcacgagatggaggaaaccacggtccccgagatccagagg
accaacctgggcaatgtggttctgctgctgaagagtctgggcataaatgatctcatccat
tttgacttcatggaccctccgccacatgaaaccctggtcctggccctggagcagctgtac
gctcttggggcccttaaccacctgggagagcttaccaagatggggaggcgaatggctgag
ctcccagtagaccccatgcttagcaaaatgatcttggcctctgaacaatacaagtgctca
gaggaggtgctgaccatcgctgccatgctgtccgtcaacaactccatcttctaccggccc
aaagacaaggtggtgcatgcagacaatgcccgaatgaactttgtggtgcctggaggcgat
catctagtgctcctgaatgtatacacacagtgggtggagagcggttactccactcagtgg
tgttatgagaactttattcagtaccgctccatgaagcgggcgcgagacgtccgggagcag
ctggagggactgatggaccgaatcgaagtggagctctgcagcgctaacgatgactccatc
cccatccgcaaggcaatcacagcaggttatttctaccacacggctcgcctcagcaaagga
ggttacaagacggtgaagcaccagcagaccgtgtatgtccaccccaacagctccctgttc
gaggagcaaccccgctggatcatctaccatgagctggtcttcaccaccaaggagttcatg
cgccaggtgatcgagatagacagcggctggctgctggaagtggctcctcactactacaag
agtaaagaactggaagacggcagcagcaagaaaatgccccggaagcagggcaaagctcgg
gaggagctgggctga
DBGET
integrated database retrieval system
