Electrophorus electricus (electric eel): 113587181
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Entry
113587181 CDS
T05787
Symbol
ythdc2
Name
(RefSeq) 3'-5' RNA helicase YTHDC2
KO
K20099
ATP-dependent RNA helicase YTHDC2 [EC:
5.6.2.6
]
Organism
eee
Electrophorus electricus (electric eel)
Brite
KEGG Orthology (KO) [BR:
eee00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
eee03041
]
113587181 (ythdc2)
Enzymes [BR:
eee01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
113587181 (ythdc2)
Spliceosome [BR:
eee03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
RNA helicase-like proteins
113587181 (ythdc2)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
YTH
Helicase_C
HA2_C
R3H
OB_NTP_bind
DEAD
HA2_N
AAA_19
ATPase
Ank_2
nSTAND3
AAA_22
AAA_16
AAA_7
FtsK_SpoIIIE
ABC_tran
SRP54
PhoH
AAA_29
T2SSE
Motif
Other DBs
NCBI-GeneID:
113587181
NCBI-ProteinID:
XP_026881534
LinkDB
All DBs
Position
Unknown
AA seq
1428 aa
AA seq
DB search
MFQMNSTSQKAYMTSVKQPRSLKAKGLKDIRIDEEVKISVNISLERFHYSDEKELEFPSS
FTSSERAFVHRLAQSLGYISKSRGKGSHRFLTIWKKDGSQKARSIMTFDLTHNSKYVVRS
LLQMFPITNKERTDLLPRMKRGQSVSLETGDSNRDKNRTSGRLNNGIPQVPQRRGSSDLE
CFRRALPVFERHEEIVATIKENQVVLVVGETGSGKTTQIPQFLLDDCSRKGIPCRIFCTQ
PRRLAAIAVAERVAAERGETVGQTVGYQIRLESRVSPKTLLTFCTSGVLLRTLMAGDATL
STVTHVIVDEVHERDGLTDFLLVKLRDMLQKMPSLKLILSSAALDINLFIRYFGDCPIIY
IKGQPHEVKQLFLEDILRTTGYSNKDMCKYEKEMQIEERQQTSLTEWCELKAGLSQPKCQ
RDRLPIRILQENELLDDGGDSVFSQLSEKDVTTLEPWLMKEMDSCISSVFLEQDTDAFVQ
LFNLILNENISIDYRHSETSATALMVAAGRGFTGQMEQLLSMGASVHVKASNSWTALDWA
RHFKQTEAADLLESHISSLEAGQLDESSLVQASSSELSAEDQELLKAYHHSFDDEKVDLD
LIMHLLHRICQSSDDGAILIFLPGYDEIVGLRDRILFEDKRFAEHQHRYQVFTLHSNMQT
SDQRKVLKPTSNGARKIILSTNIAETSITINDVVFVIDSGKVKEKAFDALNHVTMLKMVW
ISKASALQRKGRAGRCRAGVCFHLFSRLRFHNMLEHQVPQLLRMPLQELCLHTKLLAPIN
CSIAEFLAKAPEPPHLVTVKNAVQMLKTIDAMDAWEDLTELGYHLADMPVEPHLGKMVLC
AVVLKCLDPILTIACTLAYRDPFVLPAQASQKRAAMLCRRRFAANTFSDHMALLRAFQAW
QKARNDGWERSFCEKNFLSQATMEMIIGMRTQLLGQLRALGFVRARGGGDIRDVNLNSEN
WAVVKAALVAGMYPSLVHVDRERLTLAGAKEKKVRFHHTSVLSQPQYKKIPPANAQAAAV
QSLPTDWLIYDEMTRAHRIASVRCGTVVTPLTVAVFGGCAKLPSTALQEPALPRADYAMN
EGSDSENEDPSTVHLAQVNIDEWLNFKLDQEMAELVFQFRQRWQSLFLRRIRFPSRPCSQ
LDEATLRALVSVLSAEEQAVSLQQPTGIGQRPKPMSPNEPLQTSSWRSTGSRRSALADLT
LQFSQQCFPRAPGQSPAPSQPKSDRDKSGFHSKRSADDRVCGKLDNLSLNLSASPSSTSE
RGAFDFTSPSAGCSKLLLPRSAAPVRYFIMKSSNLRNIELSQQRGIWSTTPSNEPKLNRA
FRESDAVFLIFSVQGSGHFQGYARMSSEISPEQCLDWGSSGLGGVFSVEWIRKDNLPFPL
THQVLNPWNDNKRRVQISRDGQELEPQAGAQLVQLWGRISKEQHEVPT
NT seq
4287 nt
NT seq
+upstream
nt +downstream
nt
atgttccaaatgaattccacctcccagaaagcatacatgacttcagttaagcagcctcgg
tccctgaaagcaaaagggctgaaagacatcaggattgatgaagaagttaaaatttccgtg
aacatatcactggagaggttccattacagtgatgagaaagagttggagtttccttcctcg
tttactagctcagagagggcttttgtacaccgtcttgctcagtccttgggctacatttca
aaaagcagaggaaaaggatcacaccgcttccttactatatggaagaaggatggctcacag
aaggcccggtccattatgacctttgaccttacccacaattccaagtatgtggtgagaagc
ttgctgcaaatgtttcctatcaccaataaagagcgcactgatctgctcccacgcatgaag
agaggccagtctgtttccctagaaactggagatagcaatcgagacaagaacagaaccagt
gggagattaaataatggcataccccaggtgccccagaggagaggctcgtctgatcttgaa
tgctttcgacgggcccttccagtctttgagcgccatgaggagattgtggcgaccatcaaa
gagaatcaggtggtgctggtcgtgggcgagacaggctcgggcaagaccacccagatccca
cagttcctgctggatgactgcagccgtaagggaattccttgccggatcttctgcacacag
cctaggagactggcagccattgccgtagccgagcgcgtggccgcggagagaggcgagact
gttggccagacagttggctaccagatccgcctggagagcagagtttctcccaaaactttg
ctgaccttctgtacaagtggtgtgcttctgaggaccctaatggctggagatgccaccctc
tccactgtcacacacgtgattgtggacgaggtccatgagcgagatggcctgacagatttt
ctcctggtcaagctgcgggacatgctgcagaagatgccctccctgaagctaatcctgtct
agcgctgccctcgacatcaatctctttatcagatactttggcgactgccccatcatctac
atcaaaggacagccacatgaagttaaacagctttttcttgaggacatcttgcggaccaca
ggctactcaaacaaagatatgtgcaagtatgagaaggagatgcaaatagaggagaggcag
cagacatctctgacagagtggtgtgagctgaaagcggggttgtctcagcccaagtgtcag
cgggacaggcttcccatccgcatcttgcaggagaatgaactgctcgatgacgggggagac
agcgtcttcagccagctgagtgagaaggatgtgacgacattagagccgtggctaatgaag
gaaatggactcctgcatctcgagcgtcttcctggagcaggacaccgacgcatttgttcag
ctcttcaacctcattctcaatgaaaatatcagcattgactacaggcacagtgagacgagt
gccactgcactgatggtggctgccgggaggggtttcactggccagatggagcagctcctc
agcatgggggcaagtgtgcacgtcaaggcctccaacagctggactgcccttgactgggcc
agacacttcaagcagacagaagcagcagatctcctggagtcacacatctcctccctggag
gcggggcagctggacgagtcgagcctggtgcaggcgagcagcagtgagctgagcgcagag
gaccaggagctgctgaaggcctaccaccacagctttgacgatgagaaggtggacctggac
ctcatcatgcacctgctccataggatctgccagagctcagatgatggtgcgattttgata
tttttaccaggctatgacgagatcgtcggactgcgagaccgcattctatttgaagataag
agatttgcagagcatcagcacaggtaccaagtgttcacattgcactccaacatgcagacc
tcagatcagaggaaggttttgaaaccaacttcaaacggagctcgcaaaattatcctctcc
accaacatcgccgagacgagcatcaccatcaacgatgtcgtctttgtcattgactctgga
aaagttaaagagaaagcgttcgatgccttgaaccatgttaccatgctgaagatggtgtgg
atttcgaaagcaagtgcgctgcagcgtaagggaagggccgggcgctgcagggcgggggtg
tgcttccacctgttcagcaggctgcgcttccacaacatgctggagcaccaggtccctcag
ctactgagaatgccactgcaggaactgtgtctccacaccaagctcctggcccctattaac
tgctccattgcagagttcctggccaaggcccccgagcctccccacctggtcacagtgaag
aatgctgtgcagatgcttaagaccatagacgccatggatgcgtgggaggacctgacagag
ctgggctaccacctggccgacatgcccgtggagccgcacctgggcaagatggttctgtgt
gctgtggtgctgaagtgtttggaccccatcctcaccatcgcctgcacgctggcctacagg
gacccattcgtcctgcctgctcaggcctcacagaaacgggctgccatgctatgcaggaga
cgcttcgctgccaacaccttcagtgaccacatggcgctgctccgggcctttcaggcatgg
cagaaagcccgcaacgatggctgggagaggtctttctgtgagaagaacttcctgtcccag
gccaccatggagatgattattggcatgcgcacccagctgctgggccagctccgggctcta
ggcttcgtgcgtgcccggggcggcggtgatatccgcgacgtcaacctgaactctgagaac
tgggcggtggtgaaggctgcgctggtggcaggcatgtaccccagcctggtgcacgtggac
agggagcggctgacgctggccggggccaaggagaagaaggtccgcttccaccacacctct
gtcctcagccagccccagtacaagaagatccctccagccaacgcccaggcagcagcagtc
cagtccctgcccaccgattggctgatttatgacgagatgacacgggcacacaggattgcc
agcgtgcggtgtggcacagtggtcactcccctcaccgtggctgtgttcggaggctgtgcc
aagctacccagtactgctctgcaggagcccgccctgcccagagcagactatgccatgaat
gagggcagtgacagtgaaaatgaagatccttctacagttcacctggcgcaggtgaatatc
gatgaatggctcaacttcaaactggatcaagagatggcagagctggtgttccagttcagg
cagcgatggcagagtctgttccttcggcgcatccgcttcccctccaggccgtgttcccag
ctggatgaggccaccctgcgggcgctggtctcggtgctgtcggccgaggagcaagccgtc
tccctgcagcagcccacgggcatcggccagagacccaaacccatgtcacccaacgagccc
ctgcagacctcatcctggaggagcaccggcagccgcaggagcgcgttggctgacttgact
ttgcaatttagtcagcagtgtttccccagggccccaggacagtcgcctgccccatcgcag
cctaagagcgacagggataagagcggtttccactccaagcgctctgcagatgaccgtgtg
tgtgggaagctggacaacctcagtctgaacctctctgctagtccctcctccacctcagag
cgaggagctttcgatttcacctctccttcagccgggtgctccaagttgctgttgcctcgg
tctgctgcgccggtgcgttacttcatcatgaagagcagtaacctgaggaacatcgagctg
tctcagcagaggggcatctggtccaccacgcccagcaacgagcccaagctgaaccgggcg
ttccgggaaagcgacgcggtcttcctcatcttctccgtgcagggttctggacacttccag
ggctatgctaggatgagctctgagatcagcccagagcagtgtctggactggggttcctcc
gggctgggaggggtcttcagtgtggagtggatccggaaagacaacctccccttccctctg
acccaccaagtactcaacccctggaatgacaacaagagaagagttcagatcagccgagat
ggacaggagctggagccccaggccggagcacagcttgtgcagctctggggtcgcatctcc
aaagagcagcacgaggtacccacatga
DBGET
integrated database retrieval system
