Electrophorus electricus (electric eel): 113587562
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Entry
113587562 CDS
T05787
Symbol
sf3b1
Name
(RefSeq) splicing factor 3B subunit 1 isoform X1
KO
K12828
splicing factor 3B subunit 1
Organism
eee
Electrophorus electricus (electric eel)
Pathway
eee03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
eee00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
113587562 (sf3b1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
eee03041
]
113587562 (sf3b1)
03036 Chromosome and associated proteins [BR:
eee03036
]
113587562 (sf3b1)
Spliceosome [BR:
eee03041
]
Complex A
U2 snRNP components
U2 snRNP specific factors
113587562 (sf3b1)
Complex B
113587562 (sf3b1)
Complex C
U2 SnRNP specific factors
113587562 (sf3b1)
Chromosome and associated proteins [BR:
eee03036
]
Eukaryotic type
Chromatin remodeling factors
B-WICH complex
113587562 (sf3b1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SF3b1
PPP2R1A-like_HEAT
TOR1L1_N
HEAT_EZ
TPR_DNAAF5
HEAT_EF3_N
HEAT_MROH2B_C
HEAT_ECM29
TPR_IPO5
Htt_N-HEAT_1
HEAT_2
XMAP215_CLASP_TOG
PIK3R4-like_middle
Adaptin_N
Motif
Other DBs
NCBI-GeneID:
113587562
NCBI-ProteinID:
XP_026882069
LinkDB
All DBs
Position
Unknown
AA seq
1310 aa
AA seq
DB search
MAKIAKTHEDIEAQILEIQGMKAALLEEGEQGVGLDSTGYYDQEIYGGSDSRFAGYVTSI
AANEQEDDDEEDSSTSLLGQKKPGYHAPVAILNSIPQSDEQYDPFAEHRPQKISDREDEY
KKRRQKMIISPERHDPFADGGKTPDPKMQVRTYMDVMKEQQLSKEEREIRLQMAEKAKSG
DLKAVNGSAASQAAAPKRKRRWDQTADQTPNATPKKVSSWDQADSAIDTPGHTPSNSRWD
ETPGRPKGSETPGATPSTRMWEPTPSHTPAGAATPGRGDTPGHATPGHGGATSSVRKNRW
DETPKTERETPGHGSGWAETPRTDRGDESVGETPTPASKRKSRWDETPASQVGSSTPLLT
PGKTPIGTPAMNMATPTPGHLMSMTPEQLQAWRWEREIDERNRPLTDEELDAMFPEGYKV
LPPPAGYVPIRTPARKLTATPTPIGGMTGFHMQTEDRSMKQMNDQPSGNLPFLKPDDIQY
FDKLLVEVDESTLSPEEQKERKIMKLLLKIKNGTPPMRKAALRQITDKAREFGAGPLFNQ
ILPLLMSPTLEDQERHLLVKVIDRILYKLDDLVRPYVHKILVVIEPLLIDEDYYARVEGR
EIISNLAKAAGLATMISTMRPDIDNMDEYVRNTTARAFAVVASALGIPSLLPFLKAVCKS
KKSWQARHTGIKIVQQIAILMGCAILPHLRSLVEIIEHGLVDEQQKVRTISALAIAALAE
AATPYGIESFDSVLKPLWKGIRQHRGKGLAAFLKAIGYLIPLMDAEYANYYTREVMLILI
REFQSPDEEMKKIVLKVVKQCCGTDGVEANYIKTEILPPFFKHFWQHRMALDRRNYRQLV
DTTVELANKVGAAEIISRIVDDLKDEAEQYRKMVMETIEKIMGNLGAADIDHKLEEQLID
GILYAFQEQTTEDSVMLNGFGTVVNALGKRVKPYLPQICGTVLWRLNNKSAKVRQQAADL
ISRTAVVMKTCQEEKLMGHLGVVLYEYLGEEYPEVLGSILGALKAIVNVIGMHKMTPPIK
DLLPRLTPILKNRHEKVQENCIDLVGRIADRGAEYVSAREWMRICFELLELLKAHKKAIR
RATVNTFGYIAKAIGPHDVLATLLNNLKVQERQNRVCTTVAIAIVAETCSPFTVLPALMN
EYRVPELNVQNGVLKSLSFLFEYIGEMGKDYIYAVTPLLEDALMDRDLVHRQTASAVVQH
MSLGVYGFGCEDSLNHLLNYVWPNVFETSPHVIQAVMGALEGLRVAIGPCRMLQYCLQGL
FHPARKVRDVYWKIYNSIYIGSQDALIAHYPLVYNDEKNPYVRYELDYFL
NT seq
3933 nt
NT seq
+upstream
nt +downstream
nt
atggcgaagatcgccaagacgcacgaagacatcgaggcgcagatcctggaaatccaggga
atgaaggcagccctgctggaggagggagagcagggtgtcggcctggattccacagggtac
tacgaccaggagatttacggaggcagcgatagccgttttgccggctatgtcacctcaatt
gccgctaatgaacaggaggatgatgatgaagaggactcttccacaagtttgcttgggcag
aagaagccagggtaccatgctccagtggccattctcaattccattccccaatcagacgaa
cagtatgatccttttgctgaacaccgaccacagaagatttcagaccgtgaagacgagtac
aagaaacgcaggcaaaagatgatcatctcccctgagcggcacgacccatttgcagatggg
ggcaaaacgccggatcccaagatgcaggtcaggacctacatggacgtgatgaaggagcag
cagctctccaaagaggagagagaaatcaggctgcaaatggcagaaaaggcaaagtcaggg
gacctgaaagcggtgaatggctccgccgcgtctcaagctgccgctcccaagcgcaagcgc
cgctgggaccagactgctgaccaaacaccaaacgccacacccaaaaaagtgtccagctgg
gatcaggcagattctgccatagacacaccaggacacaccccttctaacagtcgctgggac
gagacacctggtcgtcctaagggtagtgagacgccaggagcaacccccagcacccgcatg
tgggagcccacccccagtcacacccctgcaggggctgccacccccgggcgaggggacact
cctgggcatgccacgcctggccatggcggcgccacttccagtgtgcgcaagaatcgctgg
gatgagacaccaaagacagagagggagacccctggtcacggcagtggttgggctgaaacc
cctcgcacagacaggggggatgagtctgtgggtgagactccgacacccgccagtaagcga
aagtcccggtgggacgagactcctgccagtcaggtgggctcctctactcctctgcttacc
cctggaaagacccctatcggcacccctgctatgaacatggccactcctactccaggtcat
ctgatgagtatgacccctgagcaactgcaggcttggcgctgggaaagggagattgatgaa
aggaaccgtcctttgactgatgaggagctggacgccatgttccctgaaggctacaaggtg
ctgcccccaccagcaggctacgtgcccatccgcacacctgcccgcaagttaaccgccacg
ccaactcccatcggcggcatgactggcttccatatgcagactgaggaccggtccatgaaa
cagatgaatgaccagccgtcgggcaatctgcccttcctcaaaccagacgacatccagtac
tttgacaaacttcttgtggaggtggacgagtccaccctgagccccgaggagcagaaggag
cgcaagatcatgaagctgcttctgaagatcaagaatggcacccctcccatgaggaaggca
gccctaaggcagattacagacaaagcccgggagtttggcgccggccccctcttcaaccag
atcctgcccctgctcatgtctcctactctggaagaccaagaacgccacttgttggtgaag
gtcatcgatcgcatcctgtacaagctggatgacttggttcgaccctatgtccacaagatc
cttgtggtgattgagcccttacttatagatgaggattactatgctagagtggagggcaga
gagatcatctccaacttggcaaaggctgcgggtctggccaccatgatctccacaatgagg
ccggacattgacaacatggacgagtatgtgagaaacacgactgctcgcgcctttgccgtg
gtggcgtctgccttgggcatcccatcactcctgcctttcctcaaggccgtgtgcaaaagc
aagaagtcctggcaggctcgccacacgggcatcaagatcgtgcagcagatcgccatcctc
atgggctgtgccatcctaccccatctccgcagcttggtggagattattgaacacggtctt
gtggacgagcagcagaaggtgcgaaccatcagcgctttggctattgctgctcttgccgag
gccgccacaccctacggtatcgagtcctttgactctgtgcttaagcccctttggaagggc
atcaggcaacacagaggcaagggtctggctgctttcttgaaagccattggatacttgatt
cctctcatggatgccgagtacgccaactactacacaagggaggtgatgctcatcctcatc
agagagttccagtctccagacgaggagatgaagaagatcgtgttgaaggtggtgaaacag
tgctgtggcacagatggtgtggaggccaactacatcaaaaccgagatcctgccccctttc
tttaagcacttctggcaacaccgtatggccttagataggcgtaattacagacagttagtg
gacactacagtagagctggccaacaaagtcggggcagcggagatcatttcgcgtatcgtg
gacgacttgaaggacgaagccgaacagtaccgaaagatggtgatggagaccatcgagaag
atcatgggcaacctcggcgcagccgacatcgaccacaagctggaggagcagcttatcgac
ggcatcttgtacgccttccaagagcagaccacggaggactctgtgatgctgaatggcttc
ggcacagtggtgaacgctctgggcaagcgggtcaagccctacctgccccagatctgcggt
accgtcctgtggcgtctcaacaataaatctgccaaagtccgtcagcaggctgctgacctc
atctcccgcacagctgtggtcatgaagacctgtcaagaggaaaaactaatgggccatttg
ggtgtagtactgtacgaatacctgggagaagagtaccctgaagtgcttggaagcatcctt
ggagccctaaaagctattgttaacgtgattggtatgcacaagatgacgccacccatcaaa
gatttgcttcctcgattgacaccaatcctaaagaacaggcatgagaaggtgcaagagaac
tgcattgatttagtgggcagaattgctgacaggggtgcagagtacgtctctgccagggag
tggatgcgaatctgttttgagctcctggagttgctaaaagctcataagaaggcaatccgg
cgagccaccgtcaacacgtttggttatattgccaaggccatcgggcctcatgatgtgctt
gcaacactgctcaacaacttgaaggtgcaggagcggcagaaccgcgtgtgcacgacggta
gctatagccattgtggcggagacgtgctcgcccttcactgtgcttccggcgctgatgaac
gagtaccgcgtgccagagctcaacgttcaaaatggtgtcctcaagtccctctccttcctg
tttgaatatattggtgaaatgggcaaggactacatctatgccgtcaccccgttattagaa
gacgctctgatggacagagacctcgtgcacaggcagaccgccagcgccgtagtgcagcac
atgtccttaggtgtgtatgggtttggctgcgaggattccctgaaccacttgcttaactac
gtttggcccaacgtcttcgagacgtcgccacacgtcatccaagctgtaatgggagccctc
gaggggctccgcgtggctattggaccatgccgcatgttgcagtactgcctgcagggtttg
tttcatccagcgcgtaaagtgcgtgatgtctactggaagatttataactccatctatatt
ggctcccaggatgccctgattgcacactatccccttgtctacaatgatgagaagaaccct
tacgttcgttatgagctggattacttcctgtga
DBGET
integrated database retrieval system
