Electrophorus electricus (electric eel): 113588181
Help
Entry
113588181 CDS
T05787
Symbol
vps13a
Name
(RefSeq) LOW QUALITY PROTEIN: vacuolar protein sorting-associated protein 13A
KO
K19525
vacuolar protein sorting-associated protein 13A/C
Organism
eee
Electrophorus electricus (electric eel)
Brite
KEGG Orthology (KO) [BR:
eee00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
eee04131
]
113588181 (vps13a)
Membrane trafficking [BR:
eee04131
]
Endosome - Golgi transport
Rab GTPases and associated proteins
Rab associated proteins
113588181 (vps13a)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
VPS13_N
VPS13_M
VPS13_VAB
VPS13_C
ATG2_CAD
RRM_fung
DUF5764
Motif
Other DBs
NCBI-GeneID:
113588181
NCBI-ProteinID:
XP_026883058
LinkDB
All DBs
Position
Unknown
AA seq
3231 aa
AA seq
DB search
MVFESLVVDVLNRFLGDYVVNLDSSQLNLGIWGGDAILRNLEIKENALSQLDIPFKVRAG
HIGRLELKIPWKNLYTQSVEATLDDVYLLIVPTASIKYDAEKEEKQLQEARQRELQRIEE
TKQKAAEQENPKTEKQDTFVEKLVTQVIKNLQVKISNIHVRYEDDLTNPNSPLSFGVSLQ
NLSLQTADANWKPCLLDEKSKLFFKLVRLDNLFAYWNVNSELYSNHTAPEALRFLQQNVA
LQSSIPRDYHFIFRPISANAKLRMNPRSDVDFSSPKVDLVVHLPEVAVELSRPQYVSILE
LLGSVDMMSRNLPYRKYRPEMPVHTNAYHWWRYVITGILEVNIKPRLHMWSWQHIRRHRQ
QVKQYRELYKTKITSKKPAEGLLKKLEETEKVLDIFNITLARQQSEMEASKAGLRIYRPG
VKAEEDQAQGWFGWMWNWSGDSSTQAKESKPGASGFDTLMTPAEKTKLYTAIGYSETAVN
PNLPKSFEDMKIRFKLVSMSVSIKESKEKPEIIQLSVLDLSATLTQRPSAQAIKITAQLS
SFEVRGLPRSQVAPTLLSSRRGVEENKPLLTLMFETNPLDAAADQRLHAESQPLEIVYDA
MTVNSLSAFFMPPNDLQLDELTNATRVKLEQFRDRTSTGLMYIIETQKVLDLKINLMASY
VIVPQMGFYVPQHSLIILDLGNFQVSSQSRANLPQLSAGSSTIEDIMSRAYDSFDIQLSS
LQFLYTKPDGNWRKARRQRESALHILEPMDLKMVFSRAMVVTDSRMPKFKMSGELPLLSL
RISDDKVRGVLQLIESIPLPESRPTPRTTAQQVTPKSVKQRDTPQLTPRKPALADLRSSV
IFDSGSEEELFYDAPSSPLEDLPFFEASSGSLEQRASVKRRSAIKQDPKKNMTEFFMSFE
ISKLSIQLCHLAAEWEESVLLLQIEGLGTQLSLRTFDMTSYTFLREICLECSQYMDGENK
KVHLITTLDNTEDDLLSLEYIRADKNAPDFSSVYKNTEQLVKVNFSSLDVHLHTEALLNS
MNFLSSLLPAPTKPAPGTPSSAPQEDEDEGGGDRDASEEEKKESSAVAKRPVTKKSKFED
IVNLHIRADLSCLKVFIRGEKARISEISIEGLVSEVQMKKKSVEISANLKNIIILDCDQE
ALYKKAVSIAGKEVFDFCMVSYVDATEGEAYTDMRVVDTRVRLTVGCIQVIFLNKFISSV
LAFINNFQEAKDALAEVTVQAAEKAATGVLELAEKSTRIALDVDIKAPVVFLPQSSVSTN
VIVADLGLVTVKNRFEIVPSEAHAKIPPILDIMGVALSDLKMYRTTFKDGQFQSEIQILR
PVNMELSIKRNLAASWYHSIPDIQITGYLKPMSCVVFFXSQEDLTVVLGTLSENLSETSD
AVPTPKGSDKAESVSIKDSQGSGGTTVVTAAVVEGQKVTRLKSKLTVLFKFDSMTLVLYS
PSGSEMLDSRDEQLKLAEFTLGTITAAVDMFSDSSMKASIRLTECLLDDKRKRVKMITSR
MMAMKRGSEQSVMVDVSYRQGRDGTTLETVVQDLYLCASMEFLLTVADIFLKALAQGFSS
PAKGSKQASVTKDPAAPVQPVAVKTEMNVVVRNPEIVFVADLTRADAPALVMTTQCELVM
KSDPSGQLMTAAVTELKVVACPFMRAQAESNFTTVLQPCQVFFTSKQLAGQPQAIELSIN
SLTLKVSPIIINTVITIQSALTPTAETPEELESPVPPDLWERRDWRDLKLWFLEEESEED
VRSLVPLVPQGESLQLRVASICLTLEAGVGHRTVPMLLAKSSFHGDVKNWSTLINLHCHL
DMEVNYYNEMMGVWEPLLEPLEDETKDVFRPWTLDLKMKKKTVKGSGTSDEVDYIVPDYK
TVISITSKDQLNIMLSKCGLHMLSNLGTAFAEAAKQTAECFQRDQAPIVVKNRLGLAVAV
LHSEVFRPIGRESVGRTVELQDGESLNMDYTLTAADASQFAAMTSLSSENYIQPTPVGHT
TADIIPLIKVGRGVYSVVHRGSGVTRFFVCQIYSNEGSKFVKIRSPFQIVNHFSVPFRVL
EGSSCLGVSLPTEEFCVPLGSYRSEXYAGLMYXSLHIPPPPPPDQYGRSEGFSYDEVSQR
PGDCLESTCRHCGDDDDDDDDTRVFKISMVPVLDAMLSHSTQENIDKPFVLHLWPTVLLR
NLLPYPITYRLLANGSPAPAVLEEGHSCHLHTAVMDHASLELKLLGYLQQDWEAQYSLRS
DHEEIGFITFSSLRANEELDGDISQAALDIAVHVKKEAGQAVVAVHSPYWMVNKTGRLLQ
YKADDIHRKHPKDYDMPLLFSFKPRNFLQNNKVRLMISDSELSDDFSIDTVGSYGDVKCK
GRAKDYLVGVKIDASSFSLTRLVTFLPFYMLVNRTKHVIHVCEEGQENWTEAQPGEAAVP
FWPGRDSKKLVVKVEGCQSTAHAVDFHTPENCLLLHLDNTLGGIIVDVNLTEHSAVIRFS
DYHDGAAPFLIINHTRDQTLEVHQSSEKLEKGELGPGQAMYYTWAEPAGSRVLRWSCSGY
SGELRNEEDLLTDMKDEGKLFVLSFYEGLQRVALFTTERRVYKRLCESERVELAEQEISL
SLQDVGVSLVNNSTSQEVAYVGITSSDVVWESKPKKKRRWKVLSGKDAAVLERQYQEYME
NSPVDYFITDLHNGFQVCFTPNGTDMRILQPYDAPVRRNFLPALKVEYSVSARQKAYRVQ
INRIQIQNQLPGAIFPFVFYPVKPPKSVRMDSEVKPLTDVSIITRAAGHSDILRIKYFKV
LIQEMDLRLDLGFLYAILDLFTAENADTVTSEQEVELFGKDIEYLKTGLNHVSATDTSPI
SLFEYFHISPIKLHLSFSLSSGGEDGNKTKRETEVIPVQSLNLLLKSIGATLTDVQDVVF
KLAFFELTFQFRTTQQLQWEVIRHYSKQAIKQMYVLVLGLDVLGNPFGLIRGLSEGVEAF
FYEPYQGAIQGPEEFMEGMALGVKALVGGAVGGLAGAASRITGAMAKGVAAITMDEEYQQ
KRREAMNKQPSGLREGLTRGGKGLVSGFVSGITGIVTKPIKGAQKEGAAGFFKGVGKGIV
GAVARPTGGIIDMASSTFQGIKRAAETSQDVESLRPPRFIHEDGVIRPYREREGIGSQML
QKIENGRFAKYRYFAHAKINESDFLMITKRGIFFVTKGTFGQLTCEWQYLFDEFTKDPMI
VEERRLRIEAKERVKSVFHAKEFGKIINFKTPEIAKWVLARLQDARKNLPK
NT seq
9696 nt
NT seq
+upstream
nt +downstream
nt
atggtgttcgagtcgctggtggtggacgtcttgaacaggtttcttggtgactacgtcgtg
aacctcgacagctcccaactcaatctgggcatatggggaggtgacgcaatactgcgaaat
cttgaaataaaggaaaatgctttgagtcaactggacattcctttcaaggtcagagcaggc
catataggccgacttgaactgaagattccctggaagaacctgtacacgcagtcggtggag
gccaccctggatgacgtctacctcctcatagttcctactgccagtatcaagtatgatgca
gagaaggaggagaaacagttacaggaggctcgacagagggagcttcagaggatcgaggag
accaagcagaaagcagctgaacaagagaatccaaagactgaaaagcaggacacatttgtg
gagaaactggtcacacaggtgatcaaaaaccttcaagtgaaaatctccaacattcacgtc
cgctacgaggatgatctcaccaatccaaactctcctctctcatttggagtgtccctacaa
aacctcagtcttcagactgcggatgcaaactggaaaccctgtctgctggacgagaagtcc
aagctatttttcaagctcgtccgtctggacaatctgtttgcgtactggaacgtgaactcc
gagctgtactccaatcacactgctccagaggctctgagatttctccagcagaacgtggcc
ctgcagagctccatccctcgtgactatcatttcattttccgtccgatctccgccaacgcc
aagctgcgcatgaaccctcgctcggacgtggacttctcctcgccgaaggtggatctggtg
gtccacctgcctgaggtggcagtggagcttagcagaccacagtacgtcagcattctggag
ctgcttggctccgtggatatgatgtcacgtaatcttccgtacaggaagtatcgcccagag
atgccggtccacaccaacgcgtaccactggtggaggtacgtcatcacggggatcctggag
gtgaacatcaaaccccgcctgcacatgtggtcctggcaacacatccgtcgccaccggcaa
caggtgaagcagtacagagagctgtataagaccaagatcaccagcaagaagcctgcagaa
ggtctgctgaagaaactggaggagacggagaaagttctggatattttcaacatcacgctg
gcaagacagcaatccgagatggaggcttctaaagcagggttacggatctaccggccgggc
gtgaaggcggaggaggaccaggcgcagggctggtttggctggatgtggaactggtctgga
gacagcagcacacaggccaaggagagcaaacccggagcctcaggttttgatacgctgatg
accccggcagagaagaccaagctctacactgccattggatacagtgagacggctgtcaat
cctaacctgccaaagagctttgaggacatgaagatccgtttcaagttggtgagcatgtct
gtctccatcaaagagagcaaagagaagcctgagatcatccagctgtctgtgctggacctg
agtgccacactgacccagagaccctccgcccaggccatcaagatcacggcgcagctgtcg
tcgttcgaggtgaggggtctgcctcgcagccaggtggcgccgacgctgctttcctctcgc
cgcggggtggaggagaacaagcccctgctcacgctcatgttcgagaccaaccccctggat
gccgcggcagaccagaggctgcacgccgagtcgcaaccgctggagatcgtctacgatgct
atgaccgtcaacagcctgtctgctttcttcatgccccccaacgacctgcaactggatgag
ctcaccaacgccacgcgtgtgaagctggagcagttcagagacagaacatcgacaggactc
atgtacatcattgagacacagaaggtcctggatctgaagatcaacctgatggcttcatat
gtgatcgtgccccagatgggcttctatgtgccccagcacagcctcattattctggatctg
ggcaactttcaggtgtccagtcagagcagagctaatttaccccagctctcagcaggaagc
agcaccatagaggatattatgtctcgtgcgtatgacagctttgatatacagctgagcagt
ctgcagttcctatacaccaaaccagatgggaactggaggaaggctcgaaggcagagggag
tctgccctgcacatcctggagccgatggatctgaagatggtgttcagcagagccatggtg
gtcactgactcccgaatgccgaagtttaagatgtccggtgagcttcctctgctgtctctg
cgcatctctgatgacaaagtccgtggtgttctccagctgattgagagcattccacttcct
gagagtcgccccacgcctcggaccacagcacagcaggttacgcccaagagtgtgaaacag
agagacactccccagctcactccgagaaagcctgccttggctgacctgcgctcctcagtg
atattcgactcaggctcagaggaggagctcttctacgacgcccccagctctcctctcgag
gatctcccattcttcgaggccagctctgggtctctggaacagcgtgcctccgtaaagaga
agatctgcgataaaacaggatcccaagaagaacatgaccgagttcttcatgagcttcgag
attagcaagctgtccatccagctgtgtcacctggccgccgagtgggaggagtctgtgctg
ctgcttcagatcgagggtctgggcacccagctcagcctgcgcacctttgacatgacctca
tacacctttctgcgggagatctgcctggagtgctcacagtacatggacggcgagaataag
aaggttcacctcatcaccacgctagacaacacagaagacgatctgctctccttggagtac
atcagagcggacaagaacgcgccagatttcagttccgtgtacaaaaacacagagcagctt
gttaaggtgaatttctcctcgttggacgttcacctgcacacggaagccctcctcaactcc
atgaacttcctgagcagcctcctgcctgcacccacgaagccagcaccgggcacgccgtcc
tccgcgccgcaggaggacgaggacgagggcgggggagacagagacgcctccgaggaagag
aagaaggagtcgtccgctgtcgccaagagacccgttactaagaagtcaaagtttgaggac
attgtgaacctgcacatcagagcagatctttcctgtctgaaggtcttcataagaggagag
aaagccaggatctctgagatcagtatagaaggtctggtgtctgaagtgcagatgaaaaag
aagtctgtggagatctcagctaacctgaagaacatcatcattctagactgtgaccaagag
gctctgtacaaaaaggcagtgtctatagcaggtaaggaggtgttcgacttctgcatggtg
agctacgtggacgccacagagggcgaggcctacacggacatgcgggtcgtggacacgcgt
gtccggctgaccgtcggctgcattcaagtgatcttcctcaacaagttcatctcctccgtc
ctggcgttcatcaataacttccaggaggccaaagacgcactggccgaggtgacggtgcaa
gcagcagagaaagctgcgacaggcgtgctggagctggcggagaagagcacacgcatcgcc
ctggacgtggacatcaaagcgcccgtcgtcttcctgccacagtcctctgtgtccaccaac
gtcattgtggccgacctgggcttggtgacggtgaagaaccgcttcgaaatcgtcccatct
gaagctcacgcgaagatcccacccatcctggacatcatgggcgtggcgctgagcgatctg
aagatgtatcgaaccacgtttaaagacggacagttccagagtgagatccagatactgagg
ccagtgaacatggagctgtcaatcaagcgcaatctggctgcctcctggtaccacagcatc
ccagacatccagatcaccggatacctcaaacccatgagttgtgttgtttttttttanagt
caggaggacttgactgtggtattggggactctgagtgaaaacctgtctgagacatcagat
gctgttcctactccaaaaggctctgataaagcagagagtgtgtctatcaaagactcgcag
ggatctggaggcaccacagtggtaaccgcagccgtggtggagggccagaaggtgaccagg
ctgaagagcaagctaacagtcctcttcaagttcgactccatgaccctggtcctgtacagc
ccgagtggaagtgagatgctggactcgcgcgatgagcagctaaagctggcggagttcacc
ctgggcaccatcaccgcggctgtagacatgttctcagacagctctatgaaggcctccatc
agactcaccgagtgcctgctagacgacaaaaggaagagagtcaaaatgatcacttccagg
atgatggccatgaagagaggctcagagcagagtgtcatggtggatgtgagctacaggcag
ggccgggacggcaccaccctggagacggtagtgcaggacctctacctgtgtgccagcatg
gagttcctgctcaccgtggccgacatctttctcaaagccctggcgcagggcttctctagc
ccagccaagggcagcaagcaagcctctgtcaccaaagaccctgcagctcccgttcagccc
gtggcagtgaagacggagatgaacgtggtggtgaggaatcccgagatcgtgttcgtggct
gacctgacgcgcgccgacgcaccggccctcgtcatgacgacgcagtgcgagctggtcatg
aagagcgacccaagcgggcagctgatgacggcggccgtcaccgagctcaaggtggtggcg
tgccccttcatgcgcgcgcaggccgagagcaactttaccactgtcctgcagccgtgccag
gtgttcttcaccagcaagcagctggccggccagccgcaggccatagagctctccatcaac
tctctcaccctcaaggtttcccccatcatcataaacacggtcatcaccattcagtctgcg
ctgacccccaccgccgagacgcccgaggagctggagagccccgtgccccccgacctctgg
gagcggcgggactggcgtgacctcaagctctggttcctggaggaggagagcgaagaggat
gtcaggtccctggtgcccctggtgccgcagggtgaatccctgcagctgcgcgtcgcctcc
atctgcctgaccctggaggcgggcgtgggccaccgcaccgtgcccatgctcctggccaag
tcatccttccatggcgacgtgaagaactggagcaccctcatcaacctgcactgccacctg
gacatggaggtcaattattacaacgagatgatgggagtgtgggagcctcttttagagccc
ctcgaagatgagaccaaagatgtgttcagaccctggaccctggacctgaagatgaagaaa
aaaacggtgaagggttcagggacgtccgatgaggtggactacatagtgccggattacaaa
acagtcattagcattactagcaaagaccagctcaacatcatgctgtccaagtgcggtctg
cacatgctcagtaacctgggaacggcattcgccgaggctgccaagcagacggcggagtgc
ttccagcgtgaccaggccccaatcgtggtgaagaaccggctgggtctggccgtggccgta
ctgcacagcgaggtgtttaggcccatcgggagggagtccgtgggccgcacggtggagctc
caggacggcgagagcttgaacatggactatacgctcacggccgctgacgccagccagttt
gccgccatgaccagcctcagcagtgagaactacatccaaccgactccggtgggccacacg
acagccgacatcatccccctgatcaaagtgggccggggcgtgtacagtgtcgtgcaccgg
gggtcaggtgtcacccgcttctttgtgtgccagatctactccaacgagggcagcaagttc
gtcaagatccgctcgcctttccagatcgttaatcacttctcggtgccgttccgggtactt
gagggctcctcgtgcctgggtgtgtctctgcccacagaggagttctgtgtccctctgggc
tcctacaggtcagaatgatacgctggcttgatgtactgatctctgcacatcccccccccc
ccccccccngaccagtacggtcgctcggagggtttcagctacgatgaggtcagtcagagg
cctggggactgcctggagagcacttgccgccactgtggagatgatgatgatgatgatgat
gacacacgtgtgttcaagatcagcatggtccccgtcctggatgccatgctgtcccacagc
acccaggagaacatcgacaagccgtttgtcctccacctgtggcccactgtgctgcttcgg
aaccttctgccgtaccccatcacctacagattactggctaacgggagccccgcgccggct
gtgctggaggagggccactcatgccatctgcacacggccgtcatggaccacgccagcctg
gagctgaaactcctcggctacctgcagcaggactgggaggcgcagtacagcctccgcagc
gaccacgaggaaatcggcttcatcaccttcagctcactccgcgccaacgaggagctggac
ggggacatctcacaggcggcgctcgacatcgccgtccacgtgaagaaggaggcgggccaa
gcggtggtggctgtccactctccttattggatggtgaacaagacgggcaggctgctgcag
tacaaggccgacgacatccaccgcaaacaccccaaggactacgacatgcccctcctcttc
tcgttcaaacctcgcaacttcctgcagaacaataaggtccgcttgatgatctccgacagc
gagttgtcggacgatttttccatagacaccgtgggtagctacggcgacgtcaaatgcaaa
ggacgggctaaagactacctggtgggcgtgaagatcgacgccagcagtttcagcctgacg
cggctggtcacgttcctgcccttctacatgctggtgaacagaaccaagcacgtgatccac
gtgtgcgaggagggtcaggagaactggaccgaggcccagcctggagaggccgccgtcccg
ttctggccaggacgggattcgaagaaacttgtggtgaaggtggagggatgtcagtcgacc
gctcacgctgtcgacttccacacaccggagaactgcctcctcctgcacctcgacaacact
ctgggtggcatcattgtggacgtgaacctgacggagcactcggctgtgatccggttctcc
gactaccatgacggagcagctccctttcttatcatcaatcacaccagggaccagacgctg
gaggtccaccagagctccgagaagctggagaagggtgaacttggccccggtcaggccatg
tactacacgtgggcagagccagccgggtcccgtgtgctgcgctggagctgctccggctac
agtggcgaactgaggaacgaggaggacctgctgacggacatgaaggacgagggaaagctg
tttgtcctgtcgttttacgagggcctccagcgggtggcgctgttcaccacggagcggcgc
gtgtacaagcggctatgcgagagcgagcgggtggaactggccgagcaggagatcagcctc
tcgctgcaggacgtgggcgtctcgctcgtcaacaacagcaccagccaggaggtggcatac
gtgggcatcaccagctctgacgtcgtgtgggagtccaagccaaagaagaagcggcgctgg
aaggttctgagcgggaaagacgcggcagtgttggagcgccagtaccaggagtacatggag
aacagtccggtggactacttcatcacagacctccacaatggtttccaggtgtgtttcacc
cctaatggcacggacatgcgcatcctgcagccgtatgacgcccctgtccggaggaacttc
ctgcctgcgctgaaggtggagtacagtgtctctgcccgtcagaaagcctaccgcgtgcag
atcaacaggatccagatccaaaaccagttgccaggtgccattttcccctttgtgttctac
ccggtcaagcctcccaaatctgtcaggatggactcggaggtgaaaccactcactgacgtc
agcatcataacaagagctgccggacactcagacatcctccgcatcaagtatttcaaggtg
ctgattcaggaaatggacctgcgtctggacctcggcttcctgtatgccattctggatctg
ttcactgccgaaaacgccgacactgtcacctctgagcaggaggtggagctgtttgggaag
gatatcgagtatctgaagactggactgaaccacgtgtcagccactgacacttccccaatc
agcctcttcgagtacttccacatctctcccattaagcttcacctgagcttctcgctgagc
tcaggcggagaggatgggaacaagacaaagagagagacggaggtgattcctgttcagtcg
ctgaatctgctgctgaagagcattggagccacgctcaccgacgtgcaggacgtcgtcttc
aagttggctttctttgagctcaccttccagttccgcaccacacagcagctgcagtgggag
gtcatccgtcattactccaaacaggctatcaagcagatgtacgtgctggtgctgggttta
gacgtacttggcaacccatttggcctcatccgtggtttgtcagagggagttgaggctttc
ttttatgagccctatcagggagccattcagggtccagaggagtttatggagggcatggct
ctgggagtcaaggctctggttggaggtgcagtgggcggtctagcaggtgcagcgtctcgc
atcactggcgccatggccaaaggtgtggcggccatcaccatggatgaggagtaccagcag
aagaggagggaggccatgaacaaacagcctagcggcctccgagagggcctgacccgtggc
ggcaaaggactcgtctcgggattcgtgagtggtataacaggaattgtcacaaagcccatt
aaaggtgcccagaaggagggagcagcaggtttctttaagggcgttggaaaaggcattgtg
ggagctgttgctcgaccaacaggaggcatcattgacatggccagcagtaccttccagggc
atcaagagagcggcagaaacatctcaggatgtggagagtctgcgacctccacgcttcatc
cacgaggacggcgtcatcaggccgtacagggaaagagaggggatcggcagtcagatgcta
cagaaaattgaaaatggccgatttgcaaagtacaggtactttgctcatgccaagatcaac
gagtcggatttcctgatgatcaccaaaagggggatattttttgttaccaagggcactttc
ggtcagttgacctgcgagtggcagtatctgttcgatgaattcaccaaagaccccatgatc
gtggaggaacgccgcctacgcatcgaggcgaaggaaagagttaagtctgtgtttcacgcc
aaagagtttgggaagatcatcaacttcaagactccagaaatagccaagtgggttctggcc
aggcttcaagacgctaggaaaaatctgccaaaatag
DBGET
integrated database retrieval system
