Electrophorus electricus (electric eel): 113588497
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Entry
113588497 CDS
T05787
Symbol
ddx1
Name
(RefSeq) ATP-dependent RNA helicase DDX1
KO
K13177
ATP-dependent RNA helicase DDX1 [EC:
5.6.2.7
]
Organism
eee
Electrophorus electricus (electric eel)
Brite
KEGG Orthology (KO) [BR:
eee00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
eee03041
]
113588497 (ddx1)
03016 Transfer RNA biogenesis [BR:
eee03016
]
113588497 (ddx1)
Enzymes [BR:
eee01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
113588497 (ddx1)
Spliceosome [BR:
eee03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
RNA helicase-like proteins
113588497 (ddx1)
Transfer RNA biogenesis [BR:
eee03016
]
Eukaryotic type
tRNA spricing factors
tRNA splicing ligase complex
113588497 (ddx1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DEAD
Helicase_C
SPRY
ResIII
CMS1
DUF5766
Motif
Other DBs
NCBI-GeneID:
113588497
NCBI-ProteinID:
XP_026883493
LinkDB
All DBs
Position
Unknown
AA seq
740 aa
AA seq
DB search
MAAFSEMGVMPEIAQAVEEMDWLLPTDIQAESVPLILGGGDVLMAAETGSGKTGAFSIPL
IQIVYETLKDQQEGKKGRAAVKTGGAVFNRWQMNPYDRSPAFAIGPDGLCCQSREFKEWH
GCRSTRAVTKGKYYYEVSCQDQGLCRIGWSTSQAALDLGTDKCGFGFGGTGKKSNNKQFD
SYGEEFTMHDTIGCYLDLDKGHVSFSKNGNDLGLAFEVPQNLRGQAFFAACVLKNAELKF
NFGGEPFKNTPKRDFVAVDQAPDGHVVKTTQTGSAMVSQVKSNSNAPRALIVEPSKELAE
QTLNNVNQFKKYVENPKLRDLLIIGGVAAKEQLSVLESGVDIVVGTPGRLDDLISTGKLD
LSQVRFLVLDECDGLLSAGYTDFIMRVYNKIPQVTSDGKRLQVIVCSATLHSFDVKKLSE
KIMHFPTWVDLKGEDSVPETVHHVVVPVNPKSDRLWEKLGKNHIRTDEVHAKDNTRPGAN
TPEMWSEAIKILKGEYAVRAIKEHKMDQAIIFCRTKIDCDNMEQHLIQQGGGPEKRGHQF
SCVCLHGDRKPNERKYNLERFKKREVRFLICTDVAARGIDIHGVPYVINVTLPDEKQNYV
HRIGRVGRAERMGLAISLVAMEKEKVWYHVCANRGRGCYNTRLKEDGGCTIWYNEKELLG
EIEEHLKCTITQCEPDIKVPVDEFDGKVTYGQRRAAGGGLYKGHVDVLAPTVQELANLER
EAQTSFLHLGYLPNQLFKAF
NT seq
2223 nt
NT seq
+upstream
nt +downstream
nt
atggctgcgttttctgaaatgggcgtgatgcctgaaattgctcaggccgttgaagagatg
gactggctgttgccgaccgacattcaggccgagtctgttccactcattctcggtggagga
gatgtccttatggctgctgagacagggagcggcaaaaccggagcgttcagcatcccgttg
atccagatagtgtacgagacgctgaaggatcagcaggaggggaaaaagggtcgcgccgca
gtgaagacgggcggagcagtgtttaatagatggcagatgaatccatatgatagaagcccg
gcgtttgctatcggtccagatggcctttgctgccagagcagagagtttaaggagtggcat
ggctgtcgttccaccagggctgtgaccaaggggaaatattactatgaagtcagctgccag
gaccaaggcttgtgtaggattggctggtctactagccaggctgccctggacctgggcaca
gacaagtgtggcttcggattcggcgggacaggaaagaaatccaacaacaagcagttcgat
agctatggagaggaatttacaatgcacgacaccattggatgctaccttgacttggacaaa
ggccatgtgtcattctccaaaaatggtaatgatctgggcctggccttcgaggttccacag
aacctgaggggtcaggccttctttgctgcttgtgtactcaagaacgctgaactgaagttt
aactttggtggagagcctttcaagaacacacccaaacgggactttgtggctgtggaccaa
gccccagatggccatgttgttaaaaccacccagactggaagtgctatggtgagtcaggtg
aaatccaacagcaatgcccccagggctctgattgtggagccatccaaagagctggctgag
cagaccctcaacaacgtcaaccagtttaagaaatatgtcgaaaaccctaaactacgagac
ttgctgatcatcggaggagtggctgccaaagagcaactctctgttctggaaagcggggtt
gatatagtggtgggcaccccaggcagactcgatgatctcatatctacagggaagctggat
ctgtcccaagtgcgcttcctcgttctggatgagtgtgatgggctgctctcagccggctac
accgacttcatcatgagggtctacaacaagatcccccaggtcacttctgatggaaagaga
ctgcaggtgattgtgtgttcagccacgctgcactcgttcgatgtgaagaagctctctgag
aagatcatgcacttccccacctgggtggacctgaagggcgaggactctgtcccagagaca
gtgcatcacgtcgtggtgcccgtcaaccccaagagcgaccgtctctgggagaaacttggc
aagaaccacatcaggactgatgaagtgcacgccaaagacaatacaaggcctggagccaac
actccagagatgtggtccgaagccatcaagatcctgaagggcgagtacgcagtgcgcgcc
atcaaggagcataagatggaccaggccatcatcttctgcaggaccaagatcgactgcgac
aacatggagcagcacctcatccagcagggaggaggtcctgaaaagagaggccatcagttc
tcatgcgtctgtctccatggcgacaggaagccgaacgagcgcaaatacaacttggagagg
tttaagaaacgggaggtgaggtttctgatttgcacagacgtggcagccagaggaattgac
atccatggtgtaccgtacgtaataaacgtgaccctgcctgatgagaagcagaattacgtg
caccgcatcgggagagtgggcagagctgagaggatgggtctggccatatccctggttgct
atggagaaggagaaggtgtggtatcatgtttgtgccaacagaggtcgaggctgctataac
accaggttaaaggaagatggaggatgcactatatggtacaacgagaaagagttgctgggt
gagattgaggagcacctgaagtgcaccattacccagtgtgagccagacattaaagttcct
gtggacgagttcgatggcaaggtcacgtacggccagcgccgagctgcaggaggtggtctt
tataagggccacgtcgatgtactggctcctaccgtgcaggaactggctaacttggagcgc
gaggcccagacgtctttcctccacttaggctaccttcccaaccagctcttcaaagctttc
tga
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