Electrophorus electricus (electric eel): 113589402
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Entry
113589402 CDS
T05787
Symbol
prpf8
Name
(RefSeq) pre-mRNA-processing-splicing factor 8
KO
K12856
pre-mRNA-processing factor 8
Organism
eee
Electrophorus electricus (electric eel)
Pathway
eee03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
eee00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
113589402 (prpf8)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
eee03041
]
113589402 (prpf8)
Spliceosome [BR:
eee03041
]
Complex B
U4/U6.U5 tri-snRNP components
U5 snRNP specific factors
113589402 (prpf8)
Complex C
U5 SnRNP specific factors
113589402 (prpf8)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PROCN
PRP8_domainIV
U6-snRNA_bdg
PRO8NT
U5_2-snRNA_bdg
PROCT
RRM_4
JAB
Motif
Other DBs
NCBI-GeneID:
113589402
NCBI-ProteinID:
XP_026884840
LinkDB
All DBs
Position
Unknown
AA seq
2337 aa
AA seq
DB search
MAAAFPFRGVPGAMPPGVPPPAPVPDYMSEEKLQEKARKWQQLQAKRYSEKRKFGFVDTQ
KEDMPPEHVRKIIRDHGDMTNRKFRHDKRVYLGALKYMPHAVLKLLENMPMPWEQIRDVP
VLYHITGAISFVNEIPWVIEPVYIAQWGTMWIMMRREKRDRRHFKRMRFPPFDDEEPPLD
YADNILDVEPLEAIQMELDPEEDGPVVDWFYEHQPLKDSKYVNGTTYRRWQFSLPMMSTL
YRLANQLLTDLVDSNYFYLFDLKAFFTSKALNMAIPGGPKFEPLVRDINLQDEDWNEFND
INKIIIRQPIRTEYKIAFPYLYNNLPHHVHLTWYHTPNVVFIKTEDPDLPAFYFDPLINP
ISHRHSVKSQEPLPEDDEEFELPEYVEPFLKETPLYTDNTANGIALLWAPRPFNLRSGRT
RRAIDVPLIKNWYREHCPAGQPVKVRVSYQKLLKYYVLNALKHRPPKAQKKRYLFRSFKA
TKFFQSTKLDWVEVGLQVCRQGYNMLNLLIHRKNLNYLHLDYNFNLKPVKTLTTKERKKS
RFGNAFHLCREVLRLSKLVVDSHVQYRLGNVDAFQLADGLQYIFAHVGQLTGMYRYKYKL
MRQIRMCKDLKHLIYYRFNTGPVGKGPGCGFWAPGWRVWLFFMRGITPLLERWLGNLLAR
QFEGRHSKGVAKTVTKQRVESHFDLELRAAVMHDILDMMPEGIKQNKARTILQHLSESWR
CWKANIPWKVPGLPTPIENMILRYVKAKADWWTNTAHYNRERIRRGATVDKTVCKKNLGR
LTRLYLKAEQERQHNYLKDGPYITAEEAVAIYTTTVHWLESRRFSPIPFPPLSYKHDTKL
LILALERLKEAYSVKSRLNQSQREELGLIEQAYDNPHEALSRIKRHLLTQRAFKEVGIEF
MDLYSHLVPVYDVEPLEKITDAYLDQYLWYEADKRRLFPPWIKPADTEPPPLLVYKWCQG
INNLQDVWETMEGECNVMLESRYEKMYEKIDLTLLNRLLRLIVDHNIADYMTAKNNVVIN
YKDMNHTNSYGIIRGLQFASFIVQYYGLVMDLLVLGLHRASEMAGPPQMPNDFLSFQDST
TEVAHPIRLYCRYIDRIHMFFRFSADEARDLIQRYLTEHPDPNNENIVGYNNKKCWPRDA
RMRLMKHDVNLGRAVFWDIKNRLPRSVTTVQWENSFVSVYSKDNPNLLFNMCGFECRILP
KCRTSYEEFTHKDGVWNLQNEVTKERTAQCFLRVDDESMQRFHNRVRQILMASGSTTFTK
IVNKWNTALIGLMTYFREAVVNTQELLDLLVKCENKIQTRIKIGLNSKMPSRFPPVVFYT
PKELGGLGMLSMGHVLIPQSDLRWSKQTDVGITHFRSGMSHEEDQLIPNLYRYIQPWESE
FIDSQRVWAEYALKRQEAIAQNRRLTLEDLEDSWDRGIPRINTLFQKDRHTLAYDKGWRV
RTDFKQYQVLKQNPFWWTHQRHDGKLWNLNNYRTDMIQALGGVEGILEHTLFKGTYFPTW
EGLFWEKASGFEESMKWKKLTNAQRSGLNQIPNRRFTLWWSPTINRANVYVGFQVQLDLT
GIFMHGKIPTLKISLIQIFRAHLWQKIHESIVMDLCQVFDQELDALEIETVQKETIHPRK
SYKMNSSCADILLFASYKWNVSRPSLLADSKDVMDSTTTQKYWIDIQLRWGDYDSHDIER
YARAKFLDYTTDNMSIYPSPTGVLIAIDLAYNLHSAYGNWFPGSKPLIQQAMAKIMKANP
ALYVLRERIRKGLQLYSSEPTEPYLSSQNYGELFSNQIIWFVDDTNVYRVTIHKTFEGNL
TTKPINGAIFIFNPRTGQLFLKIIHTSVWAGQKRLGQLAKWKTAEEVAALIRSLPVEEQP
KQIIVTRKGMLDPLEVHLLDFPNIVIKGSELQLPFQACLKVEKFGDLILKATEPQMVLFN
LYDDWLKTISSYTAFSRLILILRALHVNNDRAKVILKPDKTTITEPHHIWPTLTDEEWIK
VEVQLKDLILADYGKKNNVNVASLTQSEIRDIILGMEISAPSQQRQQIAEIEKQTKEQSQ
LTATQTRTVNKHGDEIITSTTSNYETQTFSSKTEWRVRAISAANLHLRTNHIYVSSDDIK
ETGYTYILPKNVLKKFICISDLRAQIAGYLYGTSPPDNPQVKEIRCIVMVPQWGTHQTVH
LPNQLPQHEYLKEMEPLGWIHTQPNESPQLSPQDVTTHAKIMADNPSWDGEKTIIITCSF
TPGSCTLTAYKLTPSGYEWGRQNTDKGNNPKGYLPSHYERVQMLLSDRFLGFFMVPGQVS
WNYNFMGVRHDPNMKYDLQLSNPKEFYHEVHRPSHFLNFASLQEGEIYNADREDMFA
NT seq
7014 nt
NT seq
+upstream
nt +downstream
nt
atggcagctgcgttcccgttcagaggtgtcccgggagccatgccgcccggtgttcctccc
ccggccccggtgccagactacatgtccgaggagaaactacaagaaaaggcccgcaaatgg
cagcagctgcaggctaagcggtattcggagaaaaggaaatttggtttcgttgacacccag
aaagaggacatgccccctgagcatgtccgtaagatcatcagggaccatggagatatgacc
aacaggaagttccgccacgacaaacgagtctatctcggggcattgaagtacatgccccac
gcagttctgaagctgttggagaacatgcccatgccgtgggagcagatccgagacgtgccg
gtgctctaccacattacaggggccatttcctttgtcaatgaaatcccttgggtcatcgag
cccgtctacattgcgcagtggggtaccatgtggatcatgatgcgtcgggagaaacgggac
agacggcacttcaagcgcatgcgcttcccgcccttcgacgatgaggagcctccgctggac
tatgcagataacattctggacgtggagccgctggaggccattcagatggagctggatcct
gaggaggacggccccgtggtggactggttttacgagcaccagcccttgaaggactccaag
tacgtcaacgggactacatacagacgctggcagtttagtctgcccatgatgtccaccctg
taccgcctggccaatcagctgctgactgatttggtggacagtaactacttctacttgttt
gacctgaaggccttcttcacgtcgaaggccctgaatatggccattcctggagggcccaag
tttgagcccctggtcagagacatcaatctccaggacgaggactggaatgaattcaatgac
atcaataaaattatcatcagacagcccattaggaccgagtacaagatcgccttcccatac
ctgtacaacaaccttccccatcacgtgcacctcacttggtaccacactcccaatgtggtg
ttcatcaagacggaggatccagacttgcccgcattctactttgaccccctcatcaacccc
atctctcacagacattctgttaaaagtcaggaacccctgcctgaggacgacgaggagttc
gagcttccagagtacgtagaaccgttcctcaaggagacgcctttgtacaccgacaacacg
gccaacgggatcgcgttgctgtgggcgccacgaccgttcaacctgcgctccggaagaacc
cgccgcgccatcgatgttcctctcataaagaactggtaccgtgagcactgtcctgcagga
cagcccgtgaaggtgcgcgtctcctaccagaagcttctgaagtactacgttcttaacgct
ctgaaacatcgaccaccaaaagcgcagaagaagaggtacctcttccgttccttcaaggcc
acaaagttcttccagtccacgaagctggattgggtggaggtgggccttcaagtgtgcaga
cagggctacaacatgctcaacctactcatccatagaaagaatctcaactacctgcacctg
gactacaacttcaacctgaagcccgtcaaaaccctcaccaccaaggagcgtaagaagtcc
cggtttgggaacgccttccacttgtgtcgtgaggttctccgtctgagcaaactggttgtg
gacagtcacgtgcagtacagactgggaaacgtcgacgccttccagctggctgacggcctg
cagtacatctttgcccacgtgggtcagctgaccggcatgtatcgctacaagtacaagctg
atgaggcagatcaggatgtgcaaggacctgaaacatctcatctactaccgcttcaacacg
ggtccggtcgggaagggcccaggttgtggcttctgggctccgggctggagggtttggctg
ttcttcatgaggggcattacccccctgctggagaggtggttggggaacctgttggccaga
cagttcgaaggccgtcactccaagggcgtggccaagaccgtgaccaagcagcgggtggag
tcccacttcgacctggaactcagggcggccgtcatgcacgacattctggacatgatgcct
gagggcatcaagcagaacaaggccaggaccatcctgcaacacctcagcgagtcctggagg
tgctggaaggcaaacattccttggaaggtcccaggacttcccacgcccattgagaacatg
atcttgcgctacgtgaaggccaaagctgattggtggaccaacacggcccattacaaccgg
gagcgaatcaggcgaggcgctaccgtggacaagaccgtgtgcaaaaagaacctcgggcgc
ctgacacggctgtacctgaaggccgagcaggagaggcagcacaactacctgaaggacggg
ccgtacatcactgcggaggaggctgtggccatctacacgaccaccgtccactggttggag
agtcgtcgcttctctcctatccccttccccccactgtcctacaaacacgacaccaaactg
ctcatcctggcactggagaggcttaaagaggcgtacagtgtgaagtctcggctgaaccag
tcccaacgcgaggagctcggtctgatagaacaggcgtatgacaaccctcacgaggctctg
tccaggatcaagcgtcacctcctcacgcagagagcattcaaagaggtgggcatcgagttc
atggacctgtacagccacctggtgcccgtgtacgacgtggagcctctggagaagatcacg
gacgcctacctggaccagtacctgtggtacgaggccgacaaacggcgcctgttcccgccc
tggatcaagccagctgacaccgagccgccgcccctgctcgtctacaagtggtgccaaggt
atcaacaacctgcaggatgtgtgggagacgatggagggcgagtgcaacgtcatgctggag
tcgcgctatgagaagatgtacgagaagatcgacctgaccctgctcaataggctcctgcgc
ctcatcgttgaccacaacatcgccgattacatgacggccaagaacaatgttgtcatcaac
tacaaggacatgaaccacacaaactcgtacgggatcatccgcgggctacagttcgcctcc
ttcatcgtgcagtactacggcttggtgatggacctgctcgtcctgggtctccaccgcgcc
agcgagatggccggccccccgcagatgcccaacgacttcctcagtttccaggacagtacc
acggaggtggcccaccccatccgcctgtactgccgatacatcgaccgcatccacatgttc
ttcaggttctccgcagacgaggcccgggatctgatccagcgctacctgacggaacacccc
gaccccaacaatgagaacatcgtgggttacaacaacaagaagtgctggcccagagatgcc
aggatgcggctgatgaagcacgacgtgaacttgggccgtgccgtcttctgggacatcaag
aaccgcttgcctcgctccgtcaccaccgtgcagtgggagaacagctttgtgtcggtctac
agcaaagacaaccccaacctcctcttcaacatgtgcggcttcgagtgtcgcatcctgccc
aagtgccgcaccagttacgaggagttcacgcacaaggacggagtttggaacctgcagaat
gaggtaactaaggaaaggacagctcagtgcttcttgcgtgtggacgatgagtctatgcag
aggttccataacagagtccgacagattctcatggcctctggttccaccaccttcaccaag
attgtgaacaagtggaacaccgctctgatcggtctgatgacctacttccgtgaggccgtg
gtgaacacccaggagctgctagacctgttggtgaagtgtgagaacaagatccagacgcgt
atcaagatcggcctgaactccaaaatgcccagccgcttccccccggtggtcttctacacg
cccaaggagctgggaggtctgggcatgctctccatgggccacgtcctcatcccgcagtcc
gacctgaggtggtccaagcagacagacgtgggcatcactcactttcgctctggtatgagt
cacgaggaggaccagctgattcccaatctgtaccgctatatccagccatgggagagcgag
ttcattgactctcagagagtctgggctgagtatgccctgaagaggcaggaggccatcgcc
cagaacaggcgcctgaccctggaggacttggaggactcgtgggacagaggaatcccacga
atcaacaccctgttccagaaagacaggcacactctggcctatgacaagggctggagagtc
agaacggactttaaacagtaccaggtgctgaagcaaaatcccttctggtggacacatcag
agacacgacgggaaactgtggaacctcaacaactaccgtacggatatgatccaggctctg
ggcggagtggaggggatcctggaacacacactcttcaagggcacatacttccccacctgg
gaaggtctcttttgggagaaggccagtggctttgaagagtccatgaagtggaagaagctt
accaacgctcagagatcgggtctgaaccaaatccccaaccgacggtttactctctggtgg
tctcccaccatcaacagggctaatgtgtacgtgggatttcaggtgcagctggacctcaca
ggaatcttcatgcacggcaaaattccaacgctgaagatctccctgatccagatcttcaga
gctcacttgtggcagaagatccatgaaagtattgtcatggatctgtgtcaggtatttgac
caggaactggatgccctggagattgagacagtccaaaaggagaccatccaccccaggaag
tcctacaagatgaactcgtcctgcgcggacattcttctgtttgcctcttacaagtggaac
gtctcgcggccctcgcttcttgccgactccaaggacgttatggacagcaccactactcag
aagtactggattgacatccagttgcgatggggagactacgactcccacgacattgagaga
tacgccagagcaaagttcctggactacaccacagacaacatgagcatctacccctccccc
accggtgtgctgatcgccattgacctggcctacaacctgcacagcgcctatggaaactgg
ttcccaggcagcaaacccctgatccagcaggccatggcgaagatcatgaaggccaacccc
gctctgtatgtgctgagggagcgcattcgcaagggtctacagctctactcgtccgagcct
actgagccctacctgtcctcgcagaactacggcgagctcttctccaaccagatcatctgg
ttcgtggatgacacgaacgtgtaccgggtcaccatccataagacctttgagggcaacttg
acaacgaaaccgatcaacggggccattttcattttcaaccccaggacggggcagctgttt
ctgaagataattcacacatctgtgtgggcgggacagaaacgtctgggacagttggccaag
tggaagacagcagaagaggtagctgctctgatccgctccctccctgtggaagaacaaccc
aagcagatcattgtgaccagaaagggcatgttggatccccttgaggtgcacttgctggat
ttccccaacatcgtgatcaagggctctgagctgcagttgcccttccaggcctgtctgaag
gtggagaagtttggagatctcattctgaaggccaccgagcctcagatggtcctgtttaac
ctgtacgatgactggctcaagaccatctcctcctacaccgccttctcgcgtctcatcctg
atcctgagagccctccacgtgaacaacgaccgtgcgaaggtgatcctgaagcctgacaag
accaccatcaccgagccacaccacatctggcccacgctgacagacgaggagtggatcaag
gtggaggtccagctcaaagatctcatcctggctgactatggcaagaagaacaacgtgaac
gtggcatctctgacacagtccgagatcagggacattatcctgggcatggagatctccgcc
ccctctcagcagaggcagcagatcgctgagattgaaaagcagaccaaggagcagtctcag
ctgacggccacgcagacccgcaccgtcaacaagcacggcgacgagatcatcacctccacc
accagcaactacgagacgcagaccttctcctccaagactgagtggagagtcagggccatc
tctgctgccaacctgcacctgcggaccaaccacatctacgtgtcctcagatgacattaaa
gagactggctacacctacattcttcccaagaacgtgttgaaaaagttcatctgcatttca
gacttgcgtgctcagattgcaggctacctctacggcaccagcccgccagacaacccccag
gtgaaggagatccgttgcattgtgatggtccctcaatgggggacacaccagactgtgcac
ctgcccaatcagcttccgcagcacgagtacctcaaggaaatggagcctctcggctggatt
cacacacaacccaatgagtcgccccaactctccccccaggacgtcaccacccacgccaag
atcatggcagacaacccgtcttgggatggcgagaagaccatcatcatcacctgcagcttc
acccctgggtcctgtacgctgaccgcgtacaagctgactccgagcggatacgagtggggc
aggcagaacacagacaagggaaacaaccctaaggggtatctgccttcgcactatgagagg
gtgcagatgctgctctctgatcgcttcctcggtttcttcatggtgcctggccaagtctcc
tggaactataacttcatgggtgttcgtcacgaccccaacatgaaatacgacctgcagctt
tccaaccctaaagagttctaccacgaggtgcatcgcccctcccacttcctgaacttcgcc
tccctgcaggagggcgagatctacaacgctgatcgcgaggacatgttcgcctag
DBGET
integrated database retrieval system
