Electrophorus electricus (electric eel): 113590047
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Entry
113590047 CDS
T05787
Name
(RefSeq) LOW QUALITY PROTEIN: probable helicase senataxin
KO
K10706
ATP-dependent RNA/DNA helicase, senataxin [EC:
5.6.2.5
5.6.2.3
]
Organism
eee
Electrophorus electricus (electric eel)
Brite
KEGG Orthology (KO) [BR:
eee00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
eee03021
]
113590047
Enzymes [BR:
eee01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.3 DNA 5'-3' helicase
113590047
5.6.2.5 RNA 5'-3' helicase
113590047
Transcription machinery [BR:
eee03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Transcription termination factor
113590047
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
AAA_11
AAA_12
AAA_19
SEN1_N
UvrD-helicase
Viral_helicase1
AAA_30
AAA_16
AAA_22
AAA_10
ResIII
Adeno_IVa2
SLFN-g3_helicase
NAT10_TcmA_helicase
Motif
Other DBs
NCBI-GeneID:
113590047
NCBI-ProteinID:
XP_026885803
LinkDB
All DBs
Position
Unknown
AA seq
2354 aa
AA seq
DB search
MCPRNLKRFYEKNATEQKTVMETCLWCSAESDEVVTVTLQRYCTDRMSPQEMQSANDDLI
HCGECVVKYHGVRDGVPHLHKRLWELETSRLLKVCQKLLDVKLEEADVYVVDDGQERPVL
EFSPEEFIVRLRFPIMEVLKYPYLLCNRDLCNVLVKVICKMQEMENPVPVTGKYQGIYLL
MVHPNEMVRRWAIATARSLGRVDRDMYYELEEIFSCMFYIVELGISLDFPELDDYCSGKI
QMLPSHLYDSKNKKNYWLGVCMLLMQLDSQAMDSLFMGPEKCTNILQCILNTMTDRREEE
DGASDPFWPALQCFMVILDRLGSQVWSRIEPTDAFQAVTLAPSYVDEIQNIRQKTTGTRV
KLEHKDDEDMVSCSQMVYDCYSAEQGNGWSDWPSDRTGSSTAVIFEEMSCLVNILQSEIG
QDMRVYGSTFLWFIPFVRSVMELPELGIVFLVIHYLCDKINMDVLSGHAHTCDKVTEFFV
RVLVDVIELHLSKDCMSVLEPCTREWVMVIVLSAMLSGEACVNVTSDRKGRSHRVTSTSS
HASVTGVGAMSQACMKLILALLKKGRRMGTDPDATRFLNLLNVHLREVPSRGWNLTKSEC
DDLQNCLGKLAKAIGSRSAASAVPSALPTPPAGPPGSLISLNSTSPHSPQQPQCKDAETC
TRAAFSVVKEEPQWECAETQDFCSGLETIGAKKEPRSPVLISEIKAELKPDFGKIEEIRS
KLSDGQNLVKIQAIAMRRSDSGRGLNECHNLEDAGCVSGNTYPAPSGSAKQTEHSKNNWN
EDSDEDASLVRRRCRKISLGGLSSDSEHDACDSRNMSTQPFRSAMEDAHSNIIVISDDEV
DASDEKLVGEGPCSEASKTKSVLDKSPGRDYDDQSESQVFEFETQENIPSAWYNLSLDGP
AMTKKHKRHTTSEACTSCDAAEPLSSWASKTQPVTDEDIEKACQQVEEQISKQQQLWEPF
ASSTLAPAKPSDSPEMQDHFIQPKPRAPKTPTKKSAMADAKGKPCRNKKAVLIQPLSKKL
NRGTHSASAQEPEKPPPSMTPSSEPPFSVYPLTSSSVTCQVSSPAIVPPKKVRKHVESES
AAERLGLKKKQRKAFELSQRSLDCVGELRSYGQNVHVEPQQKSKRISGKGKPQPKLMGKG
RKKLLAFQEVQCCMQSRRKCQRLKPTSTAPQKPAESPVTETLSKPTCTPGSTGEPERGEE
EEEDDYSFLPCSQPDPDQKTDSKKAAKRVKLAMPEEFDKLRSEQISHALLSDSHSLENSK
GTDGSASSTTECAERANEGGFDNEDEWRSLTQNEATDMELCSQVDEMEQYGFCTQRDPVD
MDIDTAEPDTTLGGAGAAPNCLSTSVSERATPAAPAQSSINDGLFLKPGLPPVTHKAKPS
TAKIYASISRSASLAKEMEKASKHVPTACVAKAKAAHSSPLVLPLPNPARVPPAPQPPPK
PFTPPQPPMGSLNQAAKAVPSKLAQPPANQANKAVPHRSILHPSNPFPKSTDPLPNISQA
SQLRSYNTRPRPAAPVSVPAATMDLPQTLDHSYLTQAVLKWEHRMFDNYKTFGPPDDLHP
LPLKKVPTMFSSYPDYFSVLFPLLLLNAFEELATEWHSGSKIELDLKVQGIEYCNRIAGA
SFTASLNSQQDMKQLYPKEEDLVFLWLPENTGAYTSDEPEIHDSLPCVGFVSRSVVYSKG
GGTFYLQESVGDVYNEDQEKAIGYGVAMVKRSQKTPKILLIHGPPGTGKSKTIVGLLYKL
LIDDRASTSVSHQGKCSRMRILVCAPSNAAIDNLMKKMIPTFKEKSNCPQGNCGDINLVR
LGSEKTISAVLHPFSLDRQTKARTLKAQQASDSDIQRQKEELEQRIENISQQCARTLKKS
DEFVQLMAQKSHYLKXRRKRQEVQARLLQEANVICSTLSTSGSVVLESAFRRLGREPFSC
VIVDEAGQAKETETLIPFLYRCPSLILVGDPEQLPPTVVSQNAKKLGYDQSLMARLMVSL
HPLQSASVFLSMQYRMHPDICEFPSKYIYSKKLKTHCRTAEKRCSLNWPFEPYRVFDVTD
GRESRVRESFYNLKEVQLVLLLLSLVREEQAVRVGVITPYNAQKQHILEALETLKDSRSP
SVEVNTVDGFQGRDMDCIIVSCVRASSEMGSIGFVGNRQRMNVTITRAKFSLFILGHLHT
LREQSDWGALIEDAARRGTIIKTQERDFHEATRKVLKRDLLSRNPSYPHTGGLGPASPNR
SPTVSSSTGGWSRRASLPPTHADRPRDPRLSSRPSAPRLVEAQPIRELDRSRQSLLHPKQ
PVREPDRDWRRSCPRQPVRDWRRSCPRQLVRDGQSLLDPRQRAHGEAHHHDEDPHVRTDP
AHSSPWLSHRKRRR
NT seq
7065 nt
NT seq
+upstream
nt +downstream
nt
atgtgtccacgtaatttgaaaaggttctatgaaaaaaatgccacagaacaaaagacagtg
atggagacatgtctgtggtgtagcgcggagagtgatgaggttgtcacggtgacgcttcaa
cgctactgcaccgacaggatgtcgccccaggaaatgcagagcgcgaatgacgacctcatc
cactgtggcgagtgcgtggtgaaataccacggtgtacgagatggagttcctcatctgcac
aagcgtctgtgggagctcgagacgagtcggctgctgaaggtgtgccagaagctgctggac
gtgaagctggaggaagccgacgtctacgtggtggatgatggtcaggagcgccctgttctg
gagttctccccggaggagttcatcgtccgcttacgcttccccatcatggaggtgctgaag
tacccgtacctgctgtgcaacagggatctgtgtaatgtgctcgtcaaggtgatctgcaaa
atgcaggagatggagaacccagtgcccgtgacgggtaaatatcagggcatctaccttctg
atggtccaccccaacgagatggttcggcgctgggcgatagccacagccaggtcgctgggc
agagtggacagggacatgtattacgagctggaagagatcttctcctgcatgttctacatc
gtcgagctgggaatctcgctggactttcctgaactagatgactactgctccggcaaaatc
cagatgctgccctcgcatctctacgactccaagaacaaaaagaactactggctaggtgtc
tgcatgctgctgatgcagctggattcccaggctatggactccttgttcatgggccctgaa
aagtgcaccaacatcctgcagtgcatcctgaacaccatgaccgaccgccgggaagaagaa
gatggagcctctgacccattctggccagccctgcagtgtttcatggtcatcttggaccgg
ctgggatcccaggtttggagtcggatagagcccacggatgcttttcaggccgtcactctc
gctcccagctacgtagatgaaattcagaatatccgccagaaaaccacagggacaagagta
aagttggagcataaggacgatgaagacatggtgtcatgcagtcagatggtgtatgactgt
tattctgcagaacaaggaaatgggtggtcagactggccttctgacagaactgggagcagc
actgctgttatttttgaagagatgagctgtctagtcaacatcttgcagtcagagatcggg
caagacatgcgtgtgtatggaagcacgtttctctggttcattccctttgtccgctccgtc
atggagcttccggaacttggcatcgtcttcctcgttatccactacctgtgcgataaaata
aacatggatgtactgtctggtcatgcgcacacctgtgataaggtcacagagttttttgtc
cgcgttcttgttgatgtcatagaactgcatctgagtaaagactgcatgagcgtgcttgag
ccctgcactcgcgagtgggtgatggtgatagttctatctgccatgctctcgggtgaagcc
tgcgtcaatgtgacttcagataggaaaggtagatcacacagagtcacctccacttcctcc
cacgcatcggtaaccggagttggtgcaatgagccaggcttgtatgaagttgattcttgcc
ctcttgaagaaggggagacggatgggcacagatccagacgccacccggtttctgaacctc
ctcaacgttcacctgcgcgaggtcccatccagagggtggaaccttacgaaatcggagtgc
gacgatctgcagaactgcttgggcaagcttgcgaaggcgatcggcagtaggtcagctgcc
tcggcggttccatctgctctgccaacaccaccagcaggtccaccaggaagtttaatttct
ctgaattccacatcccctcattctccacagcagccccagtgcaaagatgcagaaacgtgt
acccgagccgcattcagtgtcgttaaagaggaaccacagtgggaatgtgcggaaacacaa
gatttttgcagtggccttgagactattggcgcgaaaaaggaacctcgaagccccgtattg
atctcagagattaaggctgagttgaagccagattttgggaaaatagaggaaatccggtcc
aaactcagtgatggtcagaacttggtgaagatccaagccattgcaatgaggaggtctgat
tctggacggggactaaatgaatgccataacttggaagatgcaggatgtgtatcaggaaac
acttatcctgcaccctcaggctctgccaagcagactgagcactctaaaaataattggaat
gaggattctgatgaggacgcatcactcgtccgaaggcgttgtcggaaaatttcacttgga
gggttgtccagtgattccgaacatgatgcatgtgattctcggaacatgtccacacagccc
tttagaagtgcaatggaggatgcgcactctaacataatcgtcatttcagatgacgaggtt
gatgcgagtgatgagaagttggtgggagaaggtccttgcagtgaggcaagcaaaacaaaa
agtgtcttggacaagagtccaggacgtgattatgacgatcagagtgaatcgcaggtgttt
gagtttgaaacccaagaaaatataccatctgcctggtataacttgtctcttgatggtccg
gccatgaccaagaagcacaaacgtcacacgacatctgaagcttgtaccagttgtgatgct
gcagaacctttgtcaagttgggctagcaagactcaacctgttaccgatgaagacatcgag
aaagcctgtcagcaggtggaggagcagatcagtaaacagcagcagctatgggaaccattt
gcctcaagcacattggcaccagccaagccaagtgattcccctgaaatgcaggatcatttt
atccaacccaaacctagggcccccaaaactcccactaagaagtctgccatggctgacgcg
aaagggaaaccgtgtcggaacaaaaaagccgttcttattcaaccactgagtaaaaagctg
aatcgcgggacacactctgcctcagctcaggagccagagaaacctcccccttccatgact
ccatcttctgagcctcccttctccgtttaccctttgacgagctcctctgtcacatgccag
gtgtcctcccctgccatagtcccaccaaagaaggttcgcaaacatgttgagtcggaatct
gcagcggagcgtctggggttaaagaagaagcagaggaaggcgtttgaactttcacagcgg
tccttggactgtgtgggtgagcttcggtcctacggccagaacgtgcatgtggagccgcag
cagaaatcaaaaagaattagtggaaaggggaagccccagccgaagctgatggggaaaggc
aggaagaagttgcttgcattccaagaagtacagtgttgcatgcagagccgaaggaagtgc
cagaggttgaagccaacctctactgcaccgcagaaaccagcagagagtcctgtaactgag
accctatccaagccaacatgcacacctggaagcactggggaaccagaaaggggggaggag
gaggaggaagacgactacagtttccttccatgctctcagcctgatcctgaccaaaagaca
gactctaagaaggcagccaaacgagtcaaacttgccatgccagaggaattcgataaattg
agaagtgaacagatttcacatgcgttgttgtcagattcccattctcttgagaacagtaag
ggtactgatggaagtgctagctcaacgactgaatgtgcagaaagggcaaatgaaggtggt
tttgacaacgaagatgaatggaggtcccttacacagaatgaagccacggacatggagtta
tgctctcaagtggatgaaatggagcagtacggtttctgtacccagcgagaccctgtcgat
atggatatcgacacagctgaacctgatacaactttgggaggtgcaggtgcagcacctaat
tgtttatctacctctgtgtctgagagagccacgcctgctgctcctgctcagagctctata
aatgacggtctgttcctaaagcctggattgccccctgtaactcataaagcaaagccttcc
acagccaaaatctatgcctccatttcgcgcagtgcctctttggccaaagaaatggaaaaa
gcatctaagcatgtgcccactgcctgcgtggctaaggctaaggctgcacattcctcaccc
cttgtcctgcctctacccaatcctgcgagggttccacctgcaccacaacctcctccgaag
ccgttcactcctccccaaccccccatgggttctctaaaccaggctgccaaggctgtgcca
tccaaacttgcccagccccctgcaaaccaagctaacaaggctgtacctcacagatccatc
ctgcatccttcaaaccccttccccaagtccacagatcctcttcctaatatatctcaggct
tcccagctacgttcctataatacccgcccaagaccagcagcaccggtctctgtgccagca
gcaacgatggacctgccgcagaccttggaccactcctatttgacacaggcggttctgaag
tgggagcaccgcatgtttgacaactacaaaacctttgggccgccagacgacttgcatccc
ctgcccctgaagaaggtgccaactatgttctccagctacccggattacttcagcgtcttg
ttccccctgctgcttctgaatgcatttgaggagctggctactgagtggcatagtggtagc
aagattgaacttgacctcaaagtccaaggaattgaatactgcaatcgtattgccggtgcc
agtttcacagcgagcctgaactctcagcaggatatgaagcagttgtaccctaaagaagaa
gaccttgtgtttctgtggctcccggaaaacactggagcatacaccagtgacgaaccggag
attcatgactcgcttccctgtgtgggctttgtgtcccgctcagtggtgtacagcaaggga
ggaggtaccttttatctgcaggagagcgttggggatgtgtataacgaagaccaggagaag
gcgattggctatggtgttgcaatggtgaaaaggtcccagaagacgccaaagatcctgttg
atacatggccctccaggaactggcaagagcaagaccatagttggtctgctttataaactt
cttatagatgaccgtgcgagtacatcggtaagtcaccagggcaagtgtagccggatgagg
attctggtgtgtgcaccttccaatgctgccatcgacaacctgatgaagaaaatgatcccc
accttcaaagagaagagtaactgcccccaagggaactgtggggacattaatctggtgcgg
ctgggaagtgagaagaccatctcggcagtgctgcaccccttcagcctggaccgccagacc
aaggcccgaacactgaaagcccagcaggcgtctgattctgatatacagaggcagaaggag
gagctagaacagcgtattgagaatatctctcagcagtgtgccaggactctcaaaaaatca
gacgagtttgtgcagctgatggcccagaagtctcattatctaaagnnncgccgtaagcgt
caggaggtgcaggcgcgcctgctgcaggaagctaacgtgatctgctccaccctgagcaca
agcgggagcgtcgtcctggaatctgccttccgtcgccttggccgggaacccttcagctgc
gtcatcgtggatgaggcggggcaggctaaagaaactgagaccttgattccattcctgtat
cgatgcccctcccttatcttggtgggtgatcctgagcagctcccacctactgtcgtctcc
cagaacgcgaagaaactgggctatgaccagtccctgatggcgcgcttaatggtgagcctt
catcccctgcagtctgccagcgtcttcctcagcatgcagtaccgcatgcaccccgatatc
tgcgagtttccctccaagtacatctacagcaagaaactgaagacccactgcaggactgcg
gagaagaggtgttccctgaactggccttttgaaccctaccgagtattcgacgtgacggat
ggaagggagagcagagtgagggagtccttctacaacctgaaggaggtgcagctggtgctg
ctcctgctcagcctggttcgggaggagcaggcggttcgcgtgggtgtcatcacgccctac
aacgcccagaagcagcacatcctggaggcactggagaccctgaaggacagcagaagcccc
tcggtggaagtgaacactgtggatgggttccaaggcagagacatggactgcattattgtg
tcctgtgtaagagccagtagtgaaatgggatctatcgggtttgttggaaatcgacaaaga
atgaatgtgaccataaccagagccaaattcagcctgttcatactgggacaccttcacaca
ttgagggagcagagtgactggggcgccttgatcgaagatgccgccagacgaggaaccatc
atcaaaactcaagagcgagactttcacgaggccacgaggaaggtcctgaagcgggacctg
ctgtcccgcaatccctcttacccacatacaggcgggctcggccccgcctcccccaaccgc
tcgcctacagtttcctcgtcgaccggcggctggtcacggcgagcgtccttacccccaacc
catgctgaccgtcccagagatcctcgactgtcctccagaccttcagccccgcgactggtc
gaggcccagccaatcagagagctggacagaagcaggcagagcctgctgcatccgaagcaa
ccggtcagagagccggacagagactggcggcgctcgtgtccgaggcaaccggtcagagac
tggcggcgctcgtgtccgaggcaactggtcagagacgggcagagcctgctggatccgaga
caacgggcgcacggggaggcccaccatcatgacgaggatccccatgtacgcacagacccc
gcccactcgtctccgtggttgtcacatcggaagcgcaggagatga
DBGET
integrated database retrieval system
