Electrophorus electricus (electric eel): 113591194
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Entry
113591194 CDS
T05787
Symbol
exosc1
Name
(RefSeq) exosome complex component CSL4
KO
K07573
exosome complex component CSL4
Organism
eee
Electrophorus electricus (electric eel)
Pathway
eee03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
eee00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
113591194 (exosc1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
eee03019
]
113591194 (exosc1)
Messenger RNA biogenesis [BR:
eee03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Core exosome factors
113591194 (exosc1)
Prokaryotic type
Archeal mRNA degradation factors
Exosome components
Core exosome
113591194 (exosc1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
EXOSC1
ECR1_N
RRP4_S1
Motif
Other DBs
NCBI-GeneID:
113591194
NCBI-ProteinID:
XP_026887407
LinkDB
All DBs
Position
Unknown
AA seq
194 aa
AA seq
DB search
MSPMKLCVPGERLCSTEDCIPGAGTYLRHGYVFASLAGYVLRRNEGEELPVISVVKETEA
QLLPDVGAIVTCKVTSINPRYAKVHIIYVGSTPLKDHFRGTIRKEDVRATEKDKVETYKS
FRPGDIVLAKVISLGDVQSNYLLTTAENELGVVVAHSEAGVQMVPISWCEMQCPSTHSKE
FRKVARVQPQYLQA
NT seq
585 nt
NT seq
+upstream
nt +downstream
nt
atgtcgcctatgaagctgtgtgttccaggcgaaaggctttgcagtacggaggactgcatc
cccggcgcgggcacctatctgcggcacggctacgttttcgcctcgctcgcgggctacgtg
ctgaggaggaacgaaggcgaggagcttccagtaatttcggtcgtcaaggagacagaggcg
caacttttgcctgatgttggcgccattgtcacgtgcaaggtgacgagtattaaccctcgg
tatgccaaggtgcacataatctatgttggctccacgcctctcaaagaccatttcagaggc
acaatcaggaaagaagatgtgagagcgacagagaaagacaaggtggaaacgtataaaagt
tttagacctggtgacattgttcttgccaaggtgatctcgttgggtgatgtgcagtcgaac
tacctgctgaccaccgcagagaatgaactgggcgtggtcgtggctcacagtgaagcaggg
gtacagatggtgcccatcagctggtgtgagatgcagtgccccagcacacacagcaaagag
ttccgcaaggtggcacgggtacagccgcagtacctgcaggcctga
DBGET
integrated database retrieval system