Electrophorus electricus (electric eel): 113591387
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Entry
113591387 CDS
T05787
Symbol
lsm1
Name
(RefSeq) U6 snRNA-associated Sm-like protein LSm1
KO
K12620
U6 snRNA-associated Sm-like protein LSm1
Organism
eee
Electrophorus electricus (electric eel)
Pathway
eee03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
eee00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
113591387 (lsm1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
eee03019
]
113591387 (lsm1)
Messenger RNA biogenesis [BR:
eee03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
113591387 (lsm1)
mRNA degradation factors
5'-3' decay
Lsm complex
113591387 (lsm1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
LSM
Motif
Other DBs
NCBI-GeneID:
113591387
NCBI-ProteinID:
XP_026887663
LinkDB
All DBs
Position
Unknown
AA seq
133 aa
AA seq
DB search
MNYMPGTASLIEDIDKKHLVLLRDGRTLIGILRSIDQFANLVLHQTVERIHVGKKFGDIP
RGIFVVRGENVVLLGEVDLDKECDQILQRVSIEEILEEQRMEQQAKLESERLKLQAVKER
GLSMPKADTLDDF
NT seq
402 nt
NT seq
+upstream
nt +downstream
nt
atgaattacatgccggggaccgccagcctcatcgaggacattgacaaaaaacaccttgtt
ctgctcagagatgggagaacgttaattggaatcctaaggagcatagatcagtttgccaat
ttagttttacatcaaacggtggagcgtatccatgtcggcaaaaaattcggagacatacca
cgagggatattcgtcgttagaggagaaaatgttgtcctgcttggagaagtagacctcgat
aaagagtgtgaccagatcctgcagagagtttccatcgaggagattctggaggagcagcgc
atggagcagcaggccaagctggagtcagagaggctgaagctccaggcagtgaaggaacgt
ggcttgtccatgcctaaagctgacacgctggatgacttctga
DBGET
integrated database retrieval system
