Electrophorus electricus (electric eel): 113592236
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Entry
113592236 CDS
T05787
Symbol
zswim8
Name
(RefSeq) zinc finger SWIM domain-containing protein 8
KO
K25207
zinc finger SWIM domain-containing protein 8
Organism
eee
Electrophorus electricus (electric eel)
Brite
KEGG Orthology (KO) [BR:
eee00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
eee04121
]
113592236 (zswim8)
Ubiquitin system [BR:
eee04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
Cul2 complex
Target recognizing subunit
113592236 (zswim8)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TPR_ZSWIM8
ZSWIM4-8_C
SWIM
SgrT
Motif
Other DBs
NCBI-GeneID:
113592236
NCBI-ProteinID:
XP_026888841
LinkDB
All DBs
Position
Unknown
AA seq
1690 aa
AA seq
DB search
MELMFAEWEDGERFSFEDSDRFEEDSLCSFISEAESLCQNWRGWRKQSAGPNSPTVKIKD
GQVIPLVELSAKQVAFHIPFEVVEKVYPPVPEQLQLRIAYWSFPENEEDIRLYSCLANGS
PDEFQRGEQLYRVRAVKDPLQIGFHLSATVVSPQAGQSKGAYNVAVMFDRCRITSCSCTC
GAGAKWCAHVVALCLFRIHNASAVCLRAPVSESLSRLQRDQLQKFAQYLISELPQQILPT
AQRLLDELLSSQSTAINTVCGAPDPTAGPSASDQSTWYLDESTLSDNIKKTLHKFCGPSP
VVFSDVNSMYLSSTEPPAAAEWACLLRPLRGREPEGIWNLLSIVREMFKRRDSNAAPLLE
ILTEQCLTYEQIIGWWYSVRTSASHSSASGHTGRSNGQTEVAAHACASMCDEMVVLWRLA
VLDPTVSPQRRLELAAQLKQWHLKVIEIVKRGQHRKSLDKLFQGFKPAVESCYFNWEVAY
PLPGITYCSTDKKSASFCWARAVQQQRGAKAGLSGEAAECGGGGVRSGGPDVGAPEHKPR
STSHQPQQEVAVRPKETIVSKRKGVSGVSASGVLRLGGGVALSLDDSPKGAYKVSGSSSS
AGGKAKLAQSGKGSCGGPGAAGKHPAAKRRTSSEDSSLEPDMAELSLDAAGGDPVGEDDY
QAYYLGAASEDGGERGVPDSSHEEEPDIFAGIKPLEQEGRMEVLFACAEALYAHGYSNEA
CRLAVELAKDLLANPPDLKVEQPQTKGKKSKVSTSRQTQVATSTLSKAAFLLTVLSERLE
FHNLAFRTGMFSLELQRPPASTKALEVKLAYQESEVVALLKKIPLGVVEMAAIRDRAEQL
RDGNFCDYRPVLPLMLASFIFDVLCTPVVSPTGSRPPSRNRNNEMPGDEELGFEAAVAAL
GMKTTVSEAEHPLLCEGTRREKGDLALALMITYKDDQSKLKKILDKLLDRESQTHKPQTL
SSFYSSKPTRERLGLRPLPLTCVCVCVADGAQSSSCEQQRGQDEAAPFKTEGTVPSRLAL
GGRGAYGTRCWGSPVRQKKKHTGMASIDSSAPETTSDSSPTLSRRPLRGGWAAASWGRGQ
DSDSISSSSSDSLGSSSSSGSRRAGGGARAKSTDTSRYKGRRPECHAPHVPNQPSEAAAH
FYFELAKTVLVKAGGNSSTSIFTQPSASGGHQGPHRNLHLCAFEIGLYALGLHNFVSPNW
LSRTYSSHVSWITGQAMEIGSAALNILVECWDGHLTPPEVASLADRASRARDPNMVRAAA
ELALSCLPHAHALNPNEIQRALVQCKEQDNVMLEKACMAVEEAAKGGGVYPEVLFEVAHQ
WYWLYEQTVGGGSAGQREAPSXVGSSIYQSHALPGTAVAHPQGLHPYTTIQAHLPSVCTP
QYLGHQIQHVPRPAVFPVSGSTYPQGMHSAFIGAPYPFSVASGPHPPMAATAVTFPGVPV
PSMTQIAVHPYHAADAALPLSTTVAVGGVHSGSTIQAIQGATLPGLSSQPASLVSTPFPV
EDEQHSQPISQQGLHYLHSAYRVGMLALEMLGRRAHNDHPNNFSRSPPYTEDVKWLLSLA
ARLGVNYVYQFCVGAAKGVLSPFVLQEIIMEALQRLNPAHIHAHLRTPAFHQLVQRCQQA
YLQYIHHRLIHLTPADHDDFVNIVRSARGAFCLTPVGMMQFNDVLQNLKRGKQTKELWQR
ISLEMATFSP
NT seq
5073 nt
NT seq
+upstream
nt +downstream
nt
atggaactgatgttcgccgagtgggaagacggagagaggttctccttcgaagactctgac
cgttttgaagaggattccctttgctcgtttatatcggaggcggagagcctctgtcagaac
tggagaggatggaggaaacagtctgctggtccgaattcacccacagttaagattaaagat
ggacaggtcatccccctggtggagctgtctgccaagcaggtggccttccacatcccattt
gaggtggtggagaaggtctaccctcctgtcccagagcagctgcagctacgcattgcctac
tggagctttcctgagaacgaggaggacatcaggctctactcctgcctggccaatgggagc
cccgacgagttccagcgcggcgagcagctctatcgcgtgcgggctgtgaaggatcccctg
cagataggcttccatctgagcgccaccgtggtgtccccccaggctggccagtccaagggc
gcctacaacgtggccgtcatgtttgaccgctgcagaatcacctcctgcagctgtacgtgt
ggagcaggggccaagtggtgcgcccacgtggtggcgctctgcctcttccgcatccacaac
gcgtctgctgtgtgtctgcgggccccggtatcggagtcgctgtcccgcctccagagggac
caattgcagaagtttgcacagtacctcatcagtgagcttccgcagcagatcttgcccaca
gcccagcgcctcttggatgagctcctgtcctctcagtccacagctattaacacagtctgt
ggagctccagaccccacagctgggccctcggcctccgaccagagcacatggtacctggac
gagtccaccctcagtgacaacattaagaagacgctgcacaagttctgcgggccttcgcct
gttgtgttcagtgacgtgaattccatgtacctgtcatccacggagcccccagctgcagcg
gagtgggcctgcctgctgagacccctgaggggccgcgagcccgagggcatctggaacctg
ctttccatcgtcagggagatgttcaagaggagagacagtaatgcggccccactgctggag
atcctgactgaacagtgcctcacctatgagcaaatcatcggttggtggtacagcgtgcgg
acgtcggcgtctcacagcagcgccagcgggcacacgggccgcagcaacgggcagacggag
gtggcggcgcacgcctgtgccagcatgtgcgacgagatggtggtgctgtggaggttggct
gtgctcgatcccaccgtgagcccacaacggcgtctggagcttgccgcccaactcaagcag
tggcacctgaaggttatcgagatcgtgaagcgtgggcagcaccgcaagtccctggacaag
ctgttccagggcttcaagccagcagtcgagtcctgctacttcaactgggaggtggcttac
cccctgcccggcattacatactgcagcacagacaagaagagcgcctccttctgttgggcc
agggcagtgcagcagcagaggggtgccaaggcagggctgagcggggaggccgccgagtgt
gggggcggcggggtgcggagcgggggccctgacgtgggcgcacctgagcacaaaccgcgc
agcacctcccatcagccacagcaagaggtggctgtgcggcccaaggagaccattgtgagc
aagaggaagggcgtgtcgggggtgagcgcgtcaggggtgctgcggctgggcggaggcgtg
gccctgtccctggacgacagccccaagggtgcgtacaaagttagcgggtcctcctcctcc
gccggcggcaaggccaagctggcacagagcggcaaggggtcgtgcggaggcccgggtgcg
gcagggaagcaccccgccgccaaacggcgcaccagcagcgaggacagctccctggagccg
gacatggccgagctgagcctggacgcagcaggaggggatccggtcggcgaggacgattat
caggcctactatctcggcgccgcctccgaggatgggggggagaggggggtccccgacagc
agtcacgaagaggaaccggacatcttcgccgggatcaaacccctggagcaggagggccgc
atggaggtgctgtttgcctgtgcggaggcgctctacgctcacggctacagcaacgaagcc
tgtcgcctggcggtggagctggccaaggatctgctggccaaccctcccgacctcaaggtg
gagcagccgcagacgaagggtaagaagagcaaggtgtcgaccagcagacagacccaggtg
gccaccagcacgctttccaaggccgccttcctgctcacggtcctcagtgagagactggag
ttccataacttggccttcaggacgggcatgttctccctggagctccagaggccgcctgcc
tccaccaaggctctggaggtgaagctggcctaccaggagtccgaggtggtggctctgctg
aagaagatccctctgggggtggtggagatggctgccatcagggacagggcggagcagctg
agggacggcaacttctgcgactatcggcccgtcctgcccctcatgttggctagcttcata
ttcgatgttctctgcacccctgtggtctctcccacgggctctcgcccacccagccgtaac
cgtaacaacgagatgcccggtgacgaggagctgggcttcgaggccgcggtggcagcacta
ggaatgaagacgacggttagtgaggcagagcaccctctgctgtgtgagggcactaggagg
gagaagggagacctcgccctggccctgatgattacctacaaggatgaccagagcaagctg
aaaaagattttggacaagctcctggaccgggagagtcagactcacaaaccccaaaccctg
agctccttctactccagcaagccnacaagagaacgactcggcctcaggccgctgcctctg
acctgtgtgtgtgtgtgtgtggcagatggggctcagtcctcctcgtgtgagcagcagagg
ggacaggatgaggcggcgccctttaagaccgagggcacggtgcccagccgcctggcgcta
ggcgggcgcggggcctacggaacccgctgctggggctcacctgtgcggcaaaagaagaag
catacaggcatggcgagcatcgacagcagcgcccccgagacgacctcggacagctccccc
acgctcagccgacgccctctgcgaggtggttgggcggctgcttcctgggggaggggtcaa
gacagcgacagcatcagcagctcgtcctccgattcactgggctcctcgtcatccagcggg
tcacgcagggcagggggtggagccagagccaagagcaccgacaccagcaggtataaaggt
cggcgccccgagtgtcacgcgccccacgtgcccaaccagccgtccgaggcagccgcccac
ttctactttgagctggccaagacggtgctggtgaaggcaggcgggaacagctccacctcc
atcttcactcagccttctgccagtgggggccaccaggggccccaccgcaatctgcacctg
tgtgccttcgagataggcctatacgccttgggcctgcacaactttgtgtctcccaactgg
ctgtccaggacgtactcctcccatgtttcctggatcacaggccaagctatggagattggc
agcgctgccctcaacattcttgtagagtgctgggatgggcacctcacccctccggaggtg
gcatcattggcagaccgggcgtcccgggcgcgggaccccaacatggtgcgcgctgcggcg
gagctggcgctcagctgcctcccccatgcccacgccctgaaccccaacgagatccagagg
gcgctggtgcagtgcaaggagcaggacaacgtgatgctggagaaggcgtgtatggcggta
gaggaggcggccaagggagggggcgtgtaccccgaggtgctctttgaggtggcccaccag
tggtactggctgtacgagcagaccgtgggcggaggctcggcgggtcagcgcgaggccccc
agccnggtgggctccagcatctaccagtcgcacgcgctgcccggcacggcagtggcccac
cctcagggcctgcacccctacaccaccatccaggctcatctacccagtgtgtgcaccccc
caatacctgggccaccagatccagcacgtcccacgccccgctgtcttccccgtgtctgga
tccacctatccgcaaggaatgcactccgcctttatcggagcgccgtacccgttctctgtg
gcctctggtcctcacccccccatggcagcaactgcagtcacgttcccaggggttcctgta
ccgtccatgactcagatcgctgtccacccgtaccatgcagctgacgcggccctgcccctc
agcactacggtggcagtaggcggagttcactcaggctccaccattcaggccatacaggga
gccacgcttcctggcctctcctctcagcccgcctcattggttagcacgccttttcctgtg
gaagatgagcagcacagtcagccaatcagccagcagggactacactacctgcattcggcc
tacagagttggtatgctggccttggagatgctgggcaggagagctcacaacgaccatccc
aataacttctcccgtagccccccttacacggaggacgtcaagtggctgcttagcctcgct
gcgcggctcggggtgaactacgtctaccagttctgcgtgggggctgccaaaggcgtgctg
agtccgttcgtcctgcaggagatcatcatggaggccctgcagaggctgaaccccgcccac
atccacgcgcacctgcgcacccccgcctttcaccagctggtgcagcgctgccagcaggct
tacctacagtacatccaccaccggctgatccacctgaccccggcagaccacgacgacttc
gtgaacatcgtccggagtgcccgtggcgcattttgcctgacgccggtgggtatgatgcag
ttcaacgacgtcctgcagaacctgaagagaggcaagcagaccaaggagctgtggcagagg
atctcgctggagatggcgacgttctctccgtga
DBGET
integrated database retrieval system
