Erysipelothrix enhydrae: LLS04_03005
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Entry
LLS04_03005 CDS
T09930
Name
(GenBank) DEAD/DEAH box helicase
KO
K05592
ATP-dependent RNA helicase DeaD [EC:
5.6.2.7
]
Organism
eeh
Erysipelothrix enhydrae
Pathway
eeh03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
eeh00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
LLS04_03005
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
eeh03019
]
LLS04_03005
03009 Ribosome biogenesis [BR:
eeh03009
]
LLS04_03005
Enzymes [BR:
eeh01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
LLS04_03005
Messenger RNA biogenesis [BR:
eeh03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
LLS04_03005
Ribosome biogenesis [BR:
eeh03009
]
Prokaryotic type
rRNA helicases
LLS04_03005
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
DbpA
ResIII
Cas3-like_C_2
AAA_22
CMS1
Motif
Other DBs
NCBI-ProteinID:
WRB87563
LinkDB
All DBs
Position
complement(583110..584846)
Genome browser
AA seq
578 aa
AA seq
DB search
MTFKELELEEEIVRAVTEKGYEEPTDIQSQAIPILLGNHDLLAQSQTGTGKTAAFGLPML
SLTQPGDKKRTNSLILCPTRELCMQVAEEMRSFSKYKQGVNIACVYGGSPIDKQIRDLKR
GADIVVATPGRLMDHIRRKTIRLDDCRHIVLDEADEMLNMGFIEDIEEIFSFLPEERQFA
FFSATMPKEIVKLSEKFLVEPERITLSRNNLTVSRIKQIYYTVESRDKVDLTIQLLQLHK
TSGTMIFCNTKKMVDELTTQLNKAGFPALGLHGDMKQEMRSMVMSRFKKGMVSVLIATDV
AARGIDVDSMDVVINYDIPQELEYYVHRIGRTGRAGKEGLAITLVSRRQRYAIKQIERLS
NSTIVETPLPTKEQLNDLMVDQLAREIRKWNDHEQGKLFNIAYEGLRNENFTQEEIIVAF
INKMISESNLEAIKVSKQKDVKNKGEISRIGLSVGDRDGIAAAHLVSAIATASGIRGKDI
GRIKIDDNESTVEVPREFAQDIINKLSDTKINSKDVTVTMVDEFAQPTPRGGRNGRGGRD
SRRGGGNDRRRDGGRRDGGGRRDGGKRSSDQGRRSNKG
NT seq
1737 nt
NT seq
+upstream
nt +downstream
nt
atgacatttaaagaactagaattagaagaagaaatcgtaagagcagtaaccgaaaaaggt
tatgaagagccaactgatatacaatcacaggcaattccaatattgcttggtaatcatgac
ttattagctcaatctcaaacaggtacaggtaaaactgcggcgtttgggttaccaatgcta
agtttgactcaacctggagataagaaacgaacaaattcgttaatcctatgtcctacacgt
gagttatgtatgcaagtggctgaagaaatgagaagtttctcgaagtataaacaaggcgtt
aatatcgcatgtgtatacggtggtagccctattgataaacaaattagagaccttaaacgt
ggtgcagacattgtagtcgcaacaccgggtcgtttaatggatcatattcgacgtaagaca
atccgtttagatgattgccgtcatattgtcttggatgaagctgatgaaatgctaaatatg
ggatttattgaggatattgaagaaattttttcattccttcctgaagaacgccaattcgca
ttcttctcagcaacaatgcctaaggaaatcgttaaattaagcgagaaatttttggttgaa
ccagaaagaatcacactatctcgtaacaatctaactgtttctcgtattaaacaaatctat
tacactgttgaatcaagagataaagttgatttaacaattcaattattacaattgcataaa
acaagtggaacaatgatattctgtaataccaaaaaaatggttgatgaacttacaacgcaa
ttaaataaagcgggattccctgctttagggttacatggagacatgaaacaagaaatgcgt
tcaatggtaatgagccgctttaaaaaaggtatggtttctgtgttaattgcaaccgatgtt
gcagcacgtggaatcgatgttgacagtatggatgtagttattaactacgatatacctcaa
gaattagaatattatgtacaccgtattggacgtacaggtcgtgctggtaaagaaggtctt
gcgatcactttagtatcacgtagacaacgttatgcaattaagcaaatcgaacgtttatca
aattcaactattgttgaaacaccactaccaactaaggagcaattaaacgacttaatggta
gatcaacttgctcgtgaaatccgtaaatggaatgatcatgaacaaggtaaactctttaat
atcgcgtatgaaggtcttcgtaatgagaactttacacaggaagaaattattgttgctttc
attaataagatgattagtgaatcaaacttagaagcaatcaaagtttcaaaacaaaaagat
gttaagaataaaggtgaaatatcacgtattggactatcagttggagaccgtgatggtatc
gctgcagctcaccttgtaagtgcaattgcaactgcaagtggaattcgcggaaaagatatc
ggacgtatcaaaattgatgacaatgaaagtaccgtggaagttcctcgtgaatttgcacaa
gatattattaataaattatcagacacaaaaattaatagtaaagatgtgaccgttactatg
gttgatgaatttgcacaaccaacaccacgtggtggacgtaacggacgcggaggacgtgac
tcgcgtcgtggcggtggaaacgatcgtcgccgtgacggaggtcgccgtgatggtggtgga
cgtcgcgatggcggaaaacgttcaagcgatcaaggtcgtcgtagcaacaaaggatag
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