Erysipelothrix enhydrae: LLS04_03020
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Entry
LLS04_03020 CDS
T09930
Name
(GenBank) PD-(D/E)XK nuclease family protein
KO
K16899
ATP-dependent helicase/nuclease subunit B [EC:
5.6.2.4
3.1.-.-]
Organism
eeh
Erysipelothrix enhydrae
Brite
KEGG Orthology (KO) [BR:
eeh00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
eeh03400
]
LLS04_03020
Enzymes [BR:
eeh01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
LLS04_03020
DNA repair and recombination proteins [BR:
eeh03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
AddAB pathway proteins
LLS04_03020
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PDDEXK_1
Motif
Other DBs
NCBI-ProteinID:
WRB87566
LinkDB
All DBs
Position
586718..589150
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AA seq
810 aa
AA seq
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MHKIIVSNRIFHEDLKHILLSEQNYYLGVAVRDFKLAFFESDTHRRSMEISVFNQLQTCN
CPRLQEVLKYPKTMHVLIDLLQELYLYGLSLDACPHETPLQEEIFQCLSLIDPYLEKPVV
REDVAYEAVAYGLSHAEYTFLTRHNIPFIEAQSQKPESIAFKVALNPRSELEAVVQDIIR
NGYKSATIAVANKSMMEPLIESIFERYGYPLKLQDRRFDLMKSQYRALLDFAFDPNIHQL
IKAIESGAFGLKRREDIVTYLTHFEFELNDVFGVYDLCGETESYPDLFALQSCIQEDVVR
LKEYLGAIMNLDFKETLIACYNVIKSHTHGDLTPLCSLLEKHLGEYKEETYLLMLEHLDS
LQAHQQNVSPLRIVDYCSLPLIPQDHLYVVNLSAKNFPTIRSRTGIIDEAYLSCIKGYPR
LDERTQFTLKMQNHVFDHNANMTLSYSSATYEGKGQEVSYPVEQFARENNAALESWILTQ
NTYRKSIKHRLSPSLAKEIYLEDGKLIGSISAFQMFLNDPYQFFMERGLKIREPEILKFD
PRIIGTVNHAVMEYYHDKKNIDPWTDVRKVFPMTHPRYRMIYDRNQDLMKQNLDFVDASM
ADTSFQVVSKERWFREETMFNGIVLRGIIDRIDENDHYVQVIDYKSSQLAMTAENVKAGT
QLQLLTYAMIAEKAFQKKCLAVYYYGFKNPNLTTTALEYKVAKGVIVKDIDFEAEWLKAK
RYKGWLFEQPLDSYDSATYFGGLRESKDGVITAWTKPYDMNKIKPLLTQIYQTIYSDVMN
GVLDPEDSSIEIDKDLDLKKDDEEIKHDDI
NT seq
2433 nt
NT seq
+upstream
nt +downstream
nt
atgcacaaaatcatcgttagtaatcgaatcttccatgaagatttaaagcatatcttatta
tctgaacaaaattactatctcggagtagctgttcgtgattttaagcttgctttttttgaa
tcggatacacaccgtcgctctatggaaatttcggtgtttaatcaactccaaacctgtaat
tgccctcgtcttcaagaagtcttgaaatatcctaagacgatgcatgtacttatagactta
ttacaagaactgtatttatatggtttgagtttggatgcttgtcctcatgaaacacccttg
caagaagaaatctttcaatgtttatcccttattgatccatatcttgagaaaccagttgtg
cgagaagatgtggcgtatgaagcggttgcttacggattatcccatgcggagtacacgttt
ttaacgcgtcataacattccttttattgaagcacaatctcaaaaacctgagtcaatcgct
tttaaagttgctttgaatcctcgaagtgaactcgaagccgttgtgcaggatatcattcgt
aatgggtacaaatcagcaaccattgcagttgcgaacaaatcgatgatggaaccacttatc
gaatcgattttcgagcgttatggttatccactaaaattacaagatcgtcgatttgatctc
atgaaatctcaatatcgtgctttactcgatttcgcatttgacccaaatattcatcaatta
attaaagcaatcgagtcaggagcatttggtttaaaacgtcgtgaagatatcgttacttat
ctcacccattttgaatttgaacttaacgatgtctttggcgtttatgatttatgtggggaa
actgaatcttaccctgatttatttgcactacaaagttgtattcaagaggacgttgttcga
ctcaaagaatatctcggtgcgataatgaatttagattttaaagaaaccctgattgcttgt
tataacgttatcaaaagtcatacacatggtgacttaacgccgctttgttctttacttgaa
aaacatttaggagaatacaaagaggaaacctatctattaatgttggagcatcttgattca
cttcaagcacatcaacaaaatgtttccccactccgtatcgttgattattgttcactccca
ctcataccacaagatcatttatatgtcgtcaatttatccgctaaaaatttcccgactatt
cgatcacggactgggattattgatgaggcatacttgagctgtattaagggttatccacga
ttagatgaacgtacgcaattcacacttaaaatgcaaaatcacgtttttgatcataatgcc
aatatgactctatcgtatagctccgcaacgtatgaaggaaaaggccaagaggtttcttat
cccgttgagcaatttgcacgggaaaacaacgcagcccttgaatcttggattttaactcaa
aacacatatcggaaatccatcaaacaccgcctaagtccatcgcttgcgaaagaaatttac
ttagaagatggaaaacttatcggttccatatccgcatttcaaatgtttttaaatgacccc
tatcaattttttatggaacgaggtcttaaaattcgagaacctgagattcttaaatttgat
ccacgcattattggtacagttaatcatgctgtaatggagtattaccacgataaaaaaaat
attgatccatggactgatgttcgtaaagtatttccaatgactcatccgcgctatcgtatg
atctacgatcgaaatcaagatttaatgaaacaaaatcttgattttgtcgatgcttcaatg
gccgatacatcatttcaggttgtatctaaagagcggtggttccgtgaagaaacaatgttt
aatggcatcgtgcttcgcggtattattgatcgtattgatgaaaatgaccattatgtacaa
gttatcgattacaaaagttctcaattagcaatgaccgccgaaaacgttaaagccggtaca
cagttgcaattacttacgtatgcgatgattgcggagaaagcatttcaaaaaaaatgtctc
gctgtttactactacggatttaaaaatccaaacctaacaacaaccgctcttgagtataaa
gtcgcgaaaggtgttattgtaaaagacatcgatttcgaggcagaatggctcaaagcaaaa
cgctataaaggttggttgtttgaacaacccttagactcttatgatagtgcaacctatttt
ggtggtttgcgtgaatcaaaagatggggttatcactgcttggacaaaaccttatgatatg
aataaaataaaaccacttcttacccagatctatcaaaccatctattctgatgttatgaat
ggagttttagatcctgaggattcaagtattgaaattgacaaggatttagatttaaagaaa
gatgatgaggaaataaaacatgacgacatttaa
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