Erysipelothrix enhydrae: LLS04_03310
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Entry
LLS04_03310 CDS
T09930
Symbol
gyrB
Name
(GenBank) DNA topoisomerase (ATP-hydrolyzing) subunit B
KO
K02470
DNA gyrase subunit B [EC:
5.6.2.2
]
Organism
eeh
Erysipelothrix enhydrae
Brite
KEGG Orthology (KO) [BR:
eeh00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
eeh03032
]
LLS04_03310 (gyrB)
03400 DNA repair and recombination proteins [BR:
eeh03400
]
LLS04_03310 (gyrB)
Enzymes [BR:
eeh01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.2 DNA topoisomerase (ATP-hydrolysing)
LLS04_03310 (gyrB)
DNA replication proteins [BR:
eeh03032
]
Prokaryotic type
DNA Topoisomerases
LLS04_03310 (gyrB)
DNA repair and recombination proteins [BR:
eeh03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
LLS04_03310 (gyrB)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_gyraseB
DNA_gyraseB_C
Toprim
HATPase_c
HATPase_c_3
Motif
Other DBs
NCBI-ProteinID:
WRB87623
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Position
652504..654423
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AA seq
639 aa
AA seq
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MSNTKVDHSYTSSDIQVLEGLEAVRKRPGMYIGTTASRGLHHLVWEIVDNGIDEALAGFA
TEIIVNVDKDNVISVSDNGRGIPVGIHAKTGVSTAETIFTVLHAGGKFGGGAYKVSGGLH
GVGASVVNALSEWLEVKIYLDGIEYYLRFEEGGKVAVPLKEVGKTDKKGTTVRFKADPTI
FTETTEFSHDVLRDRLRQIAFLNKGIKLVFQDEREPEETRHLEFVYEDGLREYVQYMNAN
KSPIHEEIVYCEGEEEGILVEVSMQYNDGFTPNIYSFCNNINTHEGGTHEDGFKLALTRV
INNYAKEHNLLKKDDDGFLGDDVREGLTAIISVKHPDPQYEGQTKTKLGNSEVRKIVSSV
FGEQLERFLMEHPDDAKIIVDKAAIASKARVAARKARELTRRKGALEVSSLPGKLADCSN
RNPSECEIYIVEGDSAGGSAKQGRDSKFQAILPLRGKVINVEKARLHKIFDNNEIRMMIT
AFGTGVSDEMDIEKLRYHKIIIMTDADVDGAHIRTLLLTFFYRFLRPLIENGFVYIAQPP
LYKISRGNKIAYAYEEEELDELKVEFGDRFNVQRYKGLGEMNPEQLWDTTMDPETRTLIQ
VTIDDAMEADVIFETLMGDEVAPRREFIQANAEYADLDI
NT seq
1920 nt
NT seq
+upstream
nt +downstream
nt
atgtcgaatacaaaagtagatcattcatatacgtcttccgatattcaagttcttgaagga
ttggaagcggtacgtaaacgacctgggatgtatattggtactaccgcatctcgtggttta
catcatttagtttgggaaattgtagataatggtattgatgaagctttagctgggtttgca
acagaaattattgtgaatgtggataaagataatgtcatttctgtatcagataatggtcgt
gggattcctgttggaattcatgcgaagacaggtgtttcaacagctgaaacgatctttact
gtacttcatgccggaggaaaattcggtggtggagcatataaagtatcgggtggtcttcac
ggtgttggggcttctgttgttaacgcgttgtccgaatggttagaagtcaaaatttatttg
gatggtattgaatactaccttcgttttgaagagggtggaaaagtagcggtaccactcaaa
gaagttggtaaaactgataaaaaagggacaactgttcgatttaaagcagatcctacaatt
tttactgaaacgacagaattttcacacgatgtgttacgagatcgtttacgccagattgca
tttttaaacaaggggattaaacttgttttccaagacgaacgcgaacctgaagagacaaga
catctagaatttgtctacgaagatggacttcgtgaatatgttcagtatatgaatgctaat
aaatctccaatacatgaagaaatcgtatattgtgagggtgaagaagaaggaatacttgtt
gaagtatcaatgcaatataatgatggttttacgccaaacatttattcattctgtaataat
attaatacacacgaaggtggaacgcatgaagatggatttaaactagcgttaacacgtgta
attaataattacgctaaagaacacaatttacttaaaaaagatgatgacggatttttaggg
gatgatgttcgtgaaggactcaccgcgattatttctgtaaaacatccagatcctcaatat
gagggacaaacaaaaacgaaactcggtaatagtgaagttcgtaagattgtttccagtgtc
ttcggtgaacaattagaacgtttcttgatggaacatccagatgacgctaaaatcatcgtt
gataaggctgcaatcgcatcaaaagcgcgtgttgcagctcgtaaagcacgtgagttaaca
cgtcgtaaaggggcgcttgaagtttcttctttacctggaaaacttgcggattgttcgaat
cgaaacccatccgaatgtgaaatctatatcgtcgagggggattctgctggtggaagtgct
aagcagggacgtgatagcaaattccaagcgattttaccacttcgaggtaaagttattaac
gttgaaaaagcacgtttacataaaatttttgataacaatgaaattcgtatgatgattact
gcgtttggtacaggagtatccgatgaaatggatatcgaaaagttacgttatcataaaatt
attatcatgactgatgccgatgtcgatggtgcgcatattagaacgttattattaacattc
ttctatcgattcttaagaccactcatcgaaaatggattcgtctatatagctcaaccgcca
ctttataaaatttcccggggaaacaaaattgcttatgcctatgaggaagaagagttggat
gaattgaaagttgaatttggcgaccgttttaatgttcaacgatacaaaggtcttggggaa
atgaatcctgaacagttatgggatacaaccatggatccagaaacacgtacattaatacaa
gttacaattgatgatgcaatggaagcagatgttatttttgaaaccttaatgggtgatgaa
gtagcaccacgtcgtgaatttattcaggcgaatgctgaatatgctgatttggatatttag
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