Erysipelothrix enhydrae: LLS04_04830
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Entry
LLS04_04830 CDS
T09930
Name
(GenBank) DEAD/DEAH box helicase
KO
K05592
ATP-dependent RNA helicase DeaD [EC:
5.6.2.7
]
Organism
eeh
Erysipelothrix enhydrae
Pathway
eeh03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
eeh00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
LLS04_04830
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
eeh03019
]
LLS04_04830
03009 Ribosome biogenesis [BR:
eeh03009
]
LLS04_04830
Enzymes [BR:
eeh01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
LLS04_04830
Messenger RNA biogenesis [BR:
eeh03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
LLS04_04830
Ribosome biogenesis [BR:
eeh03009
]
Prokaryotic type
rRNA helicases
LLS04_04830
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
DbpA
ResIII
AAA_30
AAA_19
UTP25_NTPase-like
Helicase_RecD
Flavi_DEAD
AAA_22
Cas3-like_C_2
Motif
Other DBs
NCBI-ProteinID:
WRB86305
LinkDB
All DBs
Position
973703..975166
Genome browser
AA seq
487 aa
AA seq
DB search
MKHTFKNYGIDASILKSIQYLGYEAPTDVQQEVIPAVLSGKNIVVQSQTGSGKTASFGIP
ICHQVEWEKRKPQVLVLAPTRELAIQIQEDLFNLGRFKRLKVEALFGRSSFEKQAQRLKE
MTHIIVATPGRLLDHMARGTVDLSHIETLVIDEADEMFNMGFIDQITSIINRIPKKSQKL
LFSATMPERVKDLCTLYIKNPQWIDIETESRVEDRIDERYYIVDYPDKMTLLESVLITEN
PDSSIIFCNTKEQVEAVTNFMEDLGCKVDTLHGGMEQRFRTKVLADFKHGLFRYLVATDV
AARGLDIDDVSLVVNFDVPENTESYTHRVGRTARVDKYGKAVTFASPYEMKFMNLIINDT
DHELQKVVKPGQSLVDARRDAFEAKRDRKPKVKKDKAHDFKQEITKIHINAGKKTKMRPV
DVVGALCSIEGMTAEDIGVISIVDVSTFVEILNGKGNLVLDALKTMPIKGRPRKVNRANK
TEYERLL
NT seq
1464 nt
NT seq
+upstream
nt +downstream
nt
gtgaaacatacatttaaaaattatggaattgatgcgtcaattctaaagtcaattcaatat
ttgggctatgaagccccaacagatgttcaacaagaagtgattcctgctgtattgagcgga
aaaaatattgttgtgcaatcgcaaacgggtagtggaaaaactgcttcgtttggaattcct
atttgtcatcaggttgaatgggaaaaacgtaaacctcaagttctggtgttagcaccgacg
cgtgaactcgcaatccagattcaagaagatttatttaatcttggtcgtttcaaacgctta
aaggttgaagcattgtttggtcgcagttcatttgagaaacaagcacagcgtttaaaagaa
atgactcacatcatagtcgcaacgccaggtcgcctcttggatcatatggcgagaggaacc
gttgatctttcgcatattgaaacacttgtcattgatgaagccgatgaaatgtttaatatg
gggtttattgatcaaattacaagtatcattaaccgtatcccgaagaagagccaaaaactg
ctcttttccgcaaccatgccagaacgtgttaaagacctttgtacactttacattaaaaat
ccgcaatggattgatattgaaacagaaagtcgcgttgaagatcgtattgatgaacgttat
tatattgtggattatcccgataaaatgacattgcttgagtcagtactcattacagaaaat
ccagatagttcaatcatcttttgtaatacaaaagaacaagtcgaagccgtaacaaatttt
atggaagacttaggttgtaaagtggataccctacatggtgggatggaacaacgtttccgt
accaaagtccttgcggatttcaaacatggtcttttccgttatctagttgctacagatgtt
gcggcacgtggattggatattgatgatgtttcacttgtggtgaactttgatgttcctgaa
aacacggaaagctatacgcatcgtgttggacgtaccgcacgtgtggataaatacggtaaa
gccgtaaccttcgcaagtccttatgaaatgaaatttatgaatctaattatcaatgatacc
gatcatgaacttcaaaaagttgtgaaaccaggacaaagtcttgtggatgcacgtcgtgat
gcatttgaagccaaacgcgatcgtaaacctaaagtcaaaaaagataaagcacatgacttt
aaacaagagattaccaaaattcatattaatgctggtaagaaaactaaaatgagacccgtt
gatgttgttggggcgttatgttcaattgaaggcatgacagcagaagatattggggttatt
agtattgtggatgtttcaacttttgtggaaattctcaatggtaaaggtaatctcgttctt
gatgctcttaaaacgatgccaatcaaaggtcgtcctcgtaaagtaaaccgtgccaataaa
acggaatacgaacgacttttataa
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