Erysipelothrix enhydrae: LLS04_08065
Help
Entry
LLS04_08065 CDS
T09930
Symbol
rpoD
Name
(GenBank) RNA polymerase sigma factor RpoD
KO
K03086
RNA polymerase primary sigma factor
Organism
eeh
Erysipelothrix enhydrae
Brite
KEGG Orthology (KO) [BR:
eeh00001
]
09140 Cellular Processes
09142 Cell motility
02040 Flagellar assembly
LLS04_08065 (rpoD)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
eeh03021
]
LLS04_08065 (rpoD)
Transcription machinery [BR:
eeh03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
LLS04_08065 (rpoD)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r3
Sigma70_r2
Sigma70_r4
Sigma70_r1_2
DAXX_hist_bd
MPM1
DAP3
Motif
Other DBs
NCBI-ProteinID:
WRB86928
LinkDB
All DBs
Position
complement(1653227..1654606)
Genome browser
AA seq
459 aa
AA seq
DB search
MAAKKLKTLEEVKESFLKQYEKKRVLLNDDVEKAIDHLNLNDDDSEELFEWFTEKGIILS
DDEEDIDEEVMLEAGEPDVDDDFINDEAEEDEIFDDSLNKVDLSSYENELTSANMVRIND
PVKMYLKEIGRVNLLDAKDEPEIARRLQEGEQAKEFIINKYKEIVDPAITDEDLAERLTE
NQIGYFFDDFEAYLTENGDEENLAFLTNWVATYYDGLEARRILISANLRLVVSIAKKYVG
RGMLFLDLIQEGNMGLVKAVEKFDYTKGFKFSTYATWWIRQAITRAIADQARTIRIPVHM
VETINKLTRIQRSLVQTLGREPTAEEIAAEMENITPEKVREIQKIALDPVSLETPIGEED
DSHLGDFIEDKDALSPDEYANNQLLKEEIKMVLEGLTEREEKVLRLRFGLEDGRTRTLEE
VGKEFNVTRERIRQIEAKALRKLKHPTRSKRLRDFVDKR
NT seq
1380 nt
NT seq
+upstream
nt +downstream
nt
atggcagctaaaaaattaaaaacattagaagaagttaaagagagttttctaaaacaatat
gagaaaaagcgcgttctattaaatgatgatgtagagaaggcaatcgatcaccttaatttg
aatgacgatgattcagaagagctttttgaatggttcacggaaaaaggaatcattttgagt
gatgatgaagaagatattgatgaggaggtaatgctcgaagctggagaaccggatgtcgat
gatgattttattaatgatgaagctgaagaggatgaaatttttgatgattcactcaataaa
gttgacctaagttcatatgaaaatgaattgaccagtgcaaacatggtacgtattaacgat
ccagttaagatgtatcttaaggaaattggtcgcgttaatcttttagatgctaaagatgag
cccgaaattgcacgccgacttcaagaaggtgaacaagcaaaagaattcattatcaataaa
tataaagaaattgtcgatcctgcaattaccgatgaggatttagcagaacgtttaacagaa
aatcaaattggttacttttttgacgacttcgaagcgtatctcactgaaaacggtgatgaa
gaaaacttagcttttctcacaaactgggttgcaacatattatgatggtttagaagcacgt
cgaattcttatttcagcaaaccttcgtcttgttgtatcgattgctaaaaaatacgttggt
cgtggtatgttatttttagacttgattcaagaaggtaatatgggtcttgttaaagctgtt
gaaaaatttgactatacaaaaggatttaaattctcgacatatgcgacttggtggattcgt
caagctattacacgtgcgattgctgaccaagctcgtacaattcgaattccagttcatatg
gtggaaacaattaacaaattgacacgaatccaacgctcacttgttcaaacattaggacgt
gaaccaaccgctgaagaaatcgcagcagaaatggaaaatattacccctgaaaaagttcgt
gagattcaaaaaattgctttagatcctgtttcattggaaacaccaattggtgaagaagat
gattcgcatcttggagattttattgaagataaagatgcattatcaccagatgagtatgct
aacaatcaacttctaaaagaagaaattaagatggtacttgaaggtttaacggaacgtgaa
gagaaagtcttgcgattaagatttggtttagaggacggccgtacacgcaccttagaagag
gttggaaaagagtttaacgttacacgtgaacgtattcgtcaaatcgaagcaaaagcgctt
cgcaagttaaaacatccaactcgatcaaaacgtttaagagactttgtagacaaacgataa
DBGET
integrated database retrieval system
