Erysipelothrix enhydrae: LLS04_08150
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Entry
LLS04_08150 CDS
T09930
Name
(GenBank) DEAD/DEAH box helicase
KO
K11927
ATP-dependent RNA helicase RhlE [EC:
5.6.2.7
]
Organism
eeh
Erysipelothrix enhydrae
Pathway
eeh03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
eeh00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
LLS04_08150
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
eeh03019
]
LLS04_08150
Enzymes [BR:
eeh01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
LLS04_08150
Messenger RNA biogenesis [BR:
eeh03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
LLS04_08150
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
AAA_19
Utp25_C
AAA_22
Flavi_DEAD
CLN3
Motif
Other DBs
NCBI-ProteinID:
WRB86945
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All DBs
Position
complement(1668421..1669848)
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AA seq
475 aa
AA seq
DB search
MEFKDLGINEKILQALMEQGYEKPTPIQEQAIPTLLKHNDLIGLAQTGTGKTAAFAVPTL
QNLKEKAFDRNGKRKIRALVLTPTRELAIQIQENFEMYGKYMDLRSTVVFGGVAQRYQVK
ALRNGVDTLIATPGRLEDLMSQGYIDLSQIEIFILDEADRMLDMGFINDVKRIIKKLPKK
KQTLLFSATMPSEISSIAEMLLNNPTTVAVTPVSSTVETVEQSVYYVDQRNKTQLLIDVL
ENKSFDSVLVFTRTKRGADRVARDLCRSNINAVAIHGDKSQGARQRALSGFKDGTINVMV
ATDIAARGIDINELKYVVNYELPEVPETYVHRIGRTGRAGFSGAAISFCNFEEIPLLKDI
EHAIQMRVPVIKSHNYPLLDKTIKDGKISKKKKAKLERIKAEESKTKKKPTKQRDSKSKG
KPKKKEKELNGPYDWSNHASKKAKKQSQSGKKANGSRTRTKNQEQKTINHRKKSA
NT seq
1428 nt
NT seq
+upstream
nt +downstream
nt
atggaatttaaagatttaggtattaatgagaaaattttacaagcgttaatggaacaaggt
tatgaaaaaccaacaccgattcaggaacaagccattccaacactattgaaacataacgat
ttgattggactcgctcaaaccgggactggaaagactgctgcttttgcggtacctacgtta
caaaatttaaaagagaaagcatttgatcgtaatggaaaacgtaaaatacgtgcacttgta
ctaacacccacacgagaacttgcgattcaaattcaagaaaattttgaaatgtatggcaag
tatatggatttacgttcaactgttgtctttggtggtgttgcccaacgttatcaagttaaa
gcactccgtaatggtgttgatacattaattgctacaccaggtcgtctggaggatttaatg
agtcaaggctatattgacttatcacagattgagatttttattcttgatgaagccgatcgc
atgttggatatgggatttattaatgatgtgaaacgcattattaaaaaacttcctaagaag
aaacaaacacttcttttctctgcaacgatgccttcagaaatttcaagtattgcggaaatg
cttttaaataatcctacaacagttgcagttacaccggtatcgtctactgttgaaacagta
gagcaaagtgtttattatgtagatcaacgtaataagactcaacttctaattgatgttttg
gagaacaagtcttttgattctgttcttgtctttacacgtactaaacgtggtgcagaccgt
gtggcacgtgatttatgccgtagtaacatcaatgcagtcgcaattcatggtgacaagtcg
caaggggcccgtcaacgtgctctgagcggatttaaagatggtacgattaatgtaatggtt
gcaactgatattgcggcgcgtggtattgatattaatgaattaaaatatgtcgtgaattat
gaattaccagaggttcctgaaacatatgtgcatcgaattggccgaactggtcgtgcaggt
tttagtggtgctgcgatttcattctgtaattttgaagaaattccattacttaaagatatc
gaacatgcgatccagatgcgtgttcctgtaatcaaatcacacaactatcctttacttgat
aaaacaatcaaggatgggaaaattagtaaaaagaaaaaagcgaagttagagcgcatcaaa
gcagaagaatcaaaaacgaagaagaaaccgacgaaacaaagggattctaaatcaaaaggg
aaacctaagaaaaaagaaaaagagttaaatggtccatatgattggagtaatcatgcttct
aagaaagcaaagaaacaatctcaaagtggcaagaaagcgaatggaagtcgcacacgaaca
aaaaatcaagaacaaaaaacaataaatcatcgaaaaaaatcagcataa
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