Endozoicomonas euniceicola: NX720_00710
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Entry
NX720_00710 CDS
T08536
Symbol
recD
Name
(GenBank) exodeoxyribonuclease V subunit alpha
KO
K03581
exodeoxyribonuclease V alpha subunit [EC:
3.1.11.5
]
Organism
eei
Endozoicomonas euniceicola
Pathway
eei03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
eei00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
NX720_00710 (recD)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
eei03400
]
NX720_00710 (recD)
Enzymes [BR:
eei01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.5 exodeoxyribonuclease V
NX720_00710 (recD)
DNA repair and recombination proteins [BR:
eei03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
NX720_00710 (recD)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_19
AAA_30
RecD_N
UvrD_C_2
AAA_11
Viral_helicase1
Helicase_RecD
AAA_22
SH3_13
UvrD-helicase
SLFN-g3_helicase
nSTAND3
Mg_chelatase
AAA_28
UvrD_C
AAA_16
T2SSE
PhoH
CbiA
NTPase_1
Motif
Other DBs
NCBI-ProteinID:
UYM16489
LinkDB
All DBs
Position
161140..163173
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AA seq
677 aa
AA seq
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MTNHQSPVLQTLGQLKTAGSIRALDYQFARFLQEIGGEPLTVLAGALVSHELASGNVCLS
LEDIEQQTQTLFGVDPDALQPLKALIASGNWQEQLSGSRLVSDGSEGSVPTPLVLNRNRL
YLYRYWHFEHQVAEILRNKTARLVESNTIQAILDRLFQRDYTLLFNGLQTETDQRAAIIK
WLDVVKPDELDWHAIGQTLQQATSGNDLAHLDQLIPEHACLNWQKVAAALAATQSFSVIS
GGPGTGKTTTVTRLLALLVELEQQTKGRAPVIRLVAPTGKAAARLTESIGGALEKLHCCE
TVRNNIPSEAGTIHRLLGVIPNSTEFRHHRDNPLHLDILVVDEASMVDLPMMNRLLDALP
GDARIILLGDRDQLASVDAGSVLGDICAAAGNTYTERQQKRLQQLTGYDLRTELPESNAN
IHDCFCLLQKSYRFDASSGIGQLAAAVNGGKVKNTKAVWESGFQDIRRHLLNDSGYQTML
QLCVDQYRPYLQAIKEGQPARKVLAAFNRFRLLCALREGACGVEGLNLEIRSALARHRLI
ERETLWYPGRPVLITQNDHGLGLYNGDIGITLAGTDDRLRVVFQLPDGSLKELLPSRLPA
HETVYAMTIHKSQGSEFAHTAMILPDKINPVLTRELVYTGITRAKRMLELFTTDAVFNQS
VARQTHRSSGLKERLLA
NT seq
2034 nt
NT seq
+upstream
nt +downstream
nt
atgacaaaccatcaatctccggtactgcaaaccctggggcagttgaaaactgctggttcc
atccgtgcgctggattaccagtttgcccgttttttacaggaaatagggggtgaaccttta
acggttctggcaggcgcactggtcagccacgaactggccagcggtaatgtctgcctgtcg
ctggaagacattgaacagcaaacacaaacactgttcggcgttgatccggatgcgttacag
cctcttaaggcactgatagcatccggcaactggcaggagcagttatcaggctcccgtctg
gtttccgatggttctgagggtagtgtaccaaccccactggtattgaaccgtaatcgtctg
tatctctatcgctactggcactttgagcatcaggtagcggagattctgagaaacaaaacg
gccaggctcgttgaatctaacacgatccaggctattctcgaccggctgtttcagagagat
tacaccctgctattcaacggacttcagaccgaaaccgatcaacgggctgccatcattaaa
tggctcgatgtcgtaaaaccggatgaactggactggcacgctatcgggcagaccctgcaa
caggccacgtcaggaaatgacctggcccatctcgaccagctgattcccgaacacgcctgc
ctgaactggcaaaaagtggcagccgctctggctgccacccagtccttcagtgttatcagc
ggcgggccgggaacgggtaaaacgaccacggtcacccggttgctggccttgctggttgag
ctggaacagcaaactaaaggcagagcaccggttatacgactggtggcaccgaccggcaaa
gccgctgcgcgcctgaccgaatccattggtggtgcgctggaaaaactgcattgctgcgaa
accgttcgcaacaatatccccagtgaagcaggcactattcatcgcctgctgggcgttatc
cccaacagcacagagtttcgccaccaccgggataaccctttacatctggatattctggtg
gtcgatgaagcttccatggtggacctgcccatgatgaatcgtcttctggacgctttaccc
ggagatgcccggattattttactgggagatcgtgaccagcttgcttcagtggatgcgggc
agtgtgctgggggatatctgtgcggcggcaggcaacacttataccgaaaggcagcaaaag
cgattacagcagttaaccggttatgacctcagaacagagctaccggaaagtaatgccaat
attcacgactgcttctgtctgttgcaaaaaagttaccggttcgatgcctcttccggaatt
ggtcaactggcagcggcagtgaacggtgggaaagtcaaaaataccaaagccgtatgggaa
tccggctttcaggatatccggcgtcacctgttgaacgacagtggttatcaaaccatgttg
caactctgtgttgatcaataccgcccttatcttcaggcaataaaagaaggccagccagcc
cggaaagtactggccgcttttaaccggttccgtctgctgtgcgccctgcgggaaggagcc
tgtggtgttgaaggcttaaaccttgaaattcgcagcgccctcgcccggcatcgcctgatt
gaacgggaaaccctgtggtatccgggccgaccggttctgatcacccaaaatgatcatgga
ctcggactgtataatggcgatattggcatcacgctggcgggtacagatgatcgtcttcga
gttgttttccagttgcctgatggctctctgaaagagctgctgcccagccgcttaccggct
catgaaaccgtctacgccatgaccattcataaaagtcagggttccgaatttgcccacacg
gccatgattctgcccgataaaatcaatccggtactgacccgggagctcgtgtacacaggc
attacccgtgccaagagaatgctggaactgtttacgacagatgcagtctttaaccagtct
gttgcacgacagacacaccgatcttcaggcttgaaggagcgcttgctcgcttga
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