Endozoicomonas euniceicola: NX720_01250
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Entry
NX720_01250 CDS
T08536
Symbol
recQ
Name
(GenBank) DNA helicase RecQ
KO
K03654
ATP-dependent DNA helicase RecQ [EC:
5.6.2.4
]
Organism
eei
Endozoicomonas euniceicola
Pathway
eei03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
eei00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
NX720_01250 (recQ)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
eei03019
]
NX720_01250 (recQ)
03400 DNA repair and recombination proteins [BR:
eei03400
]
NX720_01250 (recQ)
Enzymes [BR:
eei01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
NX720_01250 (recQ)
Messenger RNA biogenesis [BR:
eei03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
NX720_01250 (recQ)
DNA repair and recombination proteins [BR:
eei03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
NX720_01250 (recQ)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RQC
DEAD
Helicase_C
HRDC
RecQ_Zn_bind
ResIII
HTH_40
Motif
Other DBs
NCBI-ProteinID:
UYM16586
LinkDB
All DBs
Position
313211..315649
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AA seq
812 aa
AA seq
DB search
MSEKALQILNSVFGYSEFRSHQQAIIQNILNRNDTLAIMPTGGGKSICYQVPALIFPGLT
LVISPLISLMEDQVNQLLALGIPAALLNSTISSAEYHNTLGKVHSGGIKLLYMAPETLML
NRTQHLLNAVQVDCLTIDEAHCISEWGHDFRPEYRQLAAVRRSLPQTVCIALTATATPRV
QQDIKTILQMTDSNEFIASFNRTNLFLEVTEKKKPLAQTLALIEKYQGQSGIIYCNSRKQ
VDKLTKVLADNGCSVAPYHAGLSTGERTYNQSAFIRDDVQIIVATVAFGMGINKSNVRFV
VHFDMPQNIESYYQQIGRAGRDGLPAYCHFLFGYGDIQKVKFFINQKSESEQRIANQHLN
ALVGFAESEECRRGPLLHYFGESYSRENCALCDNCLSEPSPLTNVTVPAQKLLSCIYRTG
QLFGASYLIDVLRGSKSKKIIERQHDQISTYGIGAELTKPQWLQLSRKLIQENLVIQDPE
FGSLKLADSARSILRGDRQIEIRLTERPEFSGKESANKQADLDYNHNLFEILRTCRKTLA
DQENVPPYIIFSDKTLIEMAVYFPHSRESLLQISGVGSVKLDHYGDAFLHEITEFCREQQ
IPENPKRHHQSASVTSGSREGEPAGRHVEIGKMFSRIQCLATLQNEFNIKLSTLLSHLYK
YQTEVASLPVTNTLLEHSALSPDLQASVMESIHRLGVNRLRPLFEDLQEQVSYNELHLLR
LHYLIHNEPRQHAAAESFKHSGTHKSASETVDLTLAEQKLLNMLISKQDSTGYIDTQHFS
PSERGLYCTRMLTSLVCKGLVSKGKGWCRTHL
NT seq
2439 nt
NT seq
+upstream
nt +downstream
nt
atgtcagaaaaagctttacagattcttaactcggtatttggctacagtgagtttcgatct
catcaacaagccattatccagaacattctcaaccgtaacgacacccttgccatcatgcct
accggtggcggaaagtccatctgttatcaggttccggcgctgatttttccggggctgacg
ctggttatctctcccctgatctcactgatggaagaccaggtcaatcaacttctggctctt
ggtattcctgccgctctattaaacagcacaatcagtagtgctgagtaccacaataccctg
ggcaaggttcacagtggcggtataaaactgctgtatatggctccggaaaccctgatgctg
aaccggacacaacatctccttaatgccgtgcaggtggattgcctgaccattgatgaggct
cactgtatttctgaatggggtcacgacttccgcccggaataccggcagctagctgcagtg
cgtcgaagtctgccccagacagtttgtatagcgctaaccgccacggcaacaccaagagtt
cagcaggatattaaaaccattctgcagatgacggactccaatgaattcatcgccagcttc
aatcgaaccaatctctttttagaggtgaccgaaaagaaaaaaccattggcacagaccctg
gcactgattgaaaaataccagggtcagtccggtattatttactgcaactcccgaaaacag
gtggataagttaacgaaggttctggctgataatggctgttccgtagcaccctaccatgcc
gggctatctaccggggagagaacgtataatcagtccgcctttatccgtgacgatgtgcag
attattgttgccactgtcgcctttggtatgggtattaataaatccaatgtgcgatttgtg
gtgcactttgatatgccacaaaacattgaaagctattatcagcagattggtcgggccgga
cgggacggactgcccgcctactgtcatttcctgtttggttatggagatatccagaaagta
aagtttttcattaaccagaaatccgaatcggaacaacggatcgccaatcaacacctgaat
gcacttgtggggtttgcagagtctgaagagtgtcgacgcggaccccttctgcattacttt
ggtgagagttatagtcgggaaaattgtgcgctgtgtgacaactgtctttctgaaccctcc
ccattaaccaatgtcactgtacctgcccagaagctgctctcttgtatctatcgcaccgga
cagctgtttggcgcctcctatttgattgatgtactgcgagggtcgaagtcaaaaaagatc
attgagcgacaacatgaccagatttccacctatggtataggcgcagaactgacgaagcca
caatggttgcagctgtcccgaaaattaattcaggagaacctggttattcaggacccagag
tttggcagtttaaaattagccgacagtgctcgctcaatactcaggggggatcgccagatt
gagattcgcctgactgagaggccagaattttcgggtaaagaatccgccaacaagcaggca
gatctggattacaaccacaatctgtttgagattctccgtacctgtcggaagacattagca
gatcaggaaaatgtgccaccttacattattttttcggataaaacgctgattgaaatggca
gtctacttcccgcattccagagaaagcctgttgcaaatcagtggtgtcggcagtgtaaaa
cttgatcattacggtgatgcattcctgcatgaaatcactgagttctgccgggagcaacag
attcctgaaaaccctaagaggcatcaccagtctgcttccgtcacttccggcagcagagaa
ggagagccagccggacgacacgtagaaatcggaaagatgttttccagaattcaatgcctc
gcaaccttacagaatgagttcaatattaagctgagtactcttctcagccacctttataaa
taccagacagaagtcgccagcttgccggtgactaataccctgcttgaacattctgcgctt
tcaccggatttgcaagcaagcgtcatggaatcaattcacaggctcggggtgaatcgctta
cgccctctgtttgaggacctgcaggaacaggtgagctacaatgagctgcatcttttaagg
cttcattacctgattcacaatgaaccccggcaacatgcagcggcagaaagctttaagcac
tccggaacccataagtcggcatcagaaactgttgatctcacactcgcagagcaaaaactc
ctgaatatgctgatatcaaaacaagacagcaccggctatatcgatacacagcatttctca
cccagtgagagggggctatactgcacacgcatgttaacatccctggtctgtaaggggttg
gtatctaaaggtaaaggttggtgcagaactcatctttaa
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