Endozoicomonas euniceicola: NX720_10335
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Entry
NX720_10335 CDS
T08536
Symbol
rho
Name
(GenBank) transcription termination factor Rho
KO
K03628
transcription termination factor Rho
Organism
eei
Endozoicomonas euniceicola
Pathway
eei03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
eei00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
NX720_10335 (rho)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
eei03021
]
NX720_10335 (rho)
03019 Messenger RNA biogenesis [BR:
eei03019
]
NX720_10335 (rho)
Transcription machinery [BR:
eei03021
]
Prokaryotic type
Bacterial type
Other transcription-related factors
Transcription termination factor
NX720_10335 (rho)
Messenger RNA biogenesis [BR:
eei03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Other RNA degradosome components
NX720_10335 (rho)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Rho_RNA_bind
ATP-synt_ab
Rho_N
Fungal_virus_P2_C
OB_RNB
S1CSD-TOTE-2
AAA_25
AAA_22
NACHT
AAA
Spore_III_AA
HAD_SAK_1
Motif
Other DBs
NCBI-ProteinID:
UYM18276
UniProt:
A0ABY6GZR2
LinkDB
All DBs
Position
2681932..2683191
Genome browser
AA seq
419 aa
AA seq
DB search
MHLTELKKQSVPELLAKANEMGLDNLARSRKQDVIFSILKRHARSGEDIFGEGVLEILQD
GFGFLRSADSSYLAGPDDIYVSPSQIRRFNLRTGDSISGKIRPPKEGERYFALLKVNEIN
FDQPENARNKILFENLTPLFPQDRLQMQMGNGSTEDLTGRIIDLVSPIGKGQRGLIVSPP
KAGKTLMLQNIAANITRNNPECHLIVLLIDERPEEVTEMARSVRGEVVASTFDEPPSRHV
QVAEMVLEKAKRLVEHKKDVVILLDSITRLARAYNTVIPSSGKVLTGGVDAHALERPKRF
FGAARNIEEGGSLTIVATALVDTGSKMDEVIFEEFKGTGNMELNLDRRIAEKRVFPAIGI
NKSGTRREDLLTTEEELQRMWILRKILHPMDEIQAVEFLLDRMKHTKTNEEFFQAMKRK
NT seq
1260 nt
NT seq
+upstream
nt +downstream
nt
atgcatcttaccgaactgaagaaacaatctgttcctgagcttctggcaaaagccaatgaa
atgggcctggacaacctcgcccgttcacgaaagcaggacgtaatattctctatcctcaag
cgccatgcccgcagcggggaagacatctttggcgaaggcgttctggaaattctccaggac
ggctttggcttcctgcgttctgccgacagttcctacctggcaggccctgatgatatttac
gtatccccaagccagattcgccgttttaacctgagaaccggcgacagcatctcgggtaaa
attcgcccgccaaaagaaggcgagcgttatttcgcgctgctgaaagttaacgaaattaat
ttcgatcagcctgaaaatgcccgcaataaaattctgtttgaaaacctgacaccactgttc
ccgcaagatcgcctgcagatgcaaatgggtaacggttcgacggaagacctgaccggtcgg
attattgacctggtctccccaatcggtaaaggtcagcgcggtctgatcgtatccccgcca
aaagccggtaaaaccctgatgctgcaaaacattgcagccaacatcacccgtaacaacccg
gaatgtcacctgattgtgctgctcatcgacgaacgtccggaggaagtgaccgagatggca
cgttccgttcgtggtgaagtggtcgcgtccacgtttgacgagccaccgtcacgtcacgtt
caggtggctgaaatggtactggagaaggccaagcgcctggttgagcacaagaaagacgtg
gtcattctgctcgactccatcacccgtctggcacgagcttacaacaccgtcattccatct
tccggcaaggttctgaccggtggtgtcgatgcccatgccctggagcgtccaaagcgcttt
tttggtgctgcccgtaacattgaagaaggcggcagcctgaccatcgtagccaccgccctg
gtggataccggttccaagatggacgaagtaattttcgaggaattcaaaggtaccggtaac
atggaactgaacctcgaccgtcgcatcgctgaaaagcgtgtgttcccggctatcggtatc
aataagtccggtacccgccgtgaagacctgctgaccacagaggaagaactgcagcgtatg
tggattctgcgtaaaatcctgcacccgatggacgaaattcaagccgtcgaattcttgctg
gatcgcatgaagcacaccaagaccaatgaagaattcttccaggccatgaagcgcaagtaa
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